mRNA_M-pyrifera_M_contig679.16380.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig679.16380.1 vs. uniprot
Match: A0A6H5JU15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU15_9PHAE) HSP 1 Score: 368 bits (944), Expect = 7.310e-100 Identity = 444/1156 (38.41%), Postives = 572/1156 (49.48%), Query Frame = 1
Query: 37 GAQQQQHARAVPAAGACESESALPKGPFRMRHQLPRTPLSSMKGSNNDNNTSGRFAGSRARSATSATKIPRSSHFARSARPVHTP---GLSTPAANAAXXXXXXXXXXXXNGDKADNMSGGWKASSPVDARQAEEAILAAFAKTPKMSRTPPRGTGLETNTNAT--SRPVVHRDACVSAALVAPVAPAXXXXAMSHKARPGPKSSSPSSTQLGKGAETQPNPPPRVPRQALSFEPPAELIFGRSSKLARTPPRAV------GDEANASVGREAMPLPVESHAGIAAGYLNREGNGASFQPIPSTLHTSSKDQAQXXXXXXXXXXXLLPPAPALARGT-GRLPEQQQTAASTGASSPWQCSSSPTSLNSSDCNAANVRSLMGSVQRPTAHAAGGGDGAG-GGLRGVLTPAAFKDYASGMRTPSTGMKQLEAPGDGKVLPMRSLDPVNTTTAH-QPAPRAAMAPRARNGKAATGFRFSSSI-EAXXXXXXXXXXXXXXXXXXXXXXXXXAETANGATEQVKPATEGPRERPVNYSVKSNVP-----AAAETAVVAVAVNNVADNARKSAVRSVPAREKEAAVDSAVADGECAKGSFDRVCESDTLDDA-----------------TRKADQDAEQAVLNPFVSSQKLARTPPAAVASSAVVAITGAAVAHVSKGAEAFCSSNPLEATRAAAPGAGDD-----------RARQESPEPRV---------AADPFASKSRVPRTPVEKATVSQLSHGAAMAGAGGETGVEVGEVGGMAARVQIGELRQEVASMADRLAKQXXERSRLAEVAFKAQDEAAQLREQLEEIQKRQ-ELGADKNSKESTSGGALFPCGAVGGGSGPG----AAGRGSDFAGDRLMELEIQKWECELGKEEAEKEAREANL-------ALDEARAEVRELTCSKEAMHEKMLEENYRRAQALCEQDERAILEHQAKAKLFAADTMAEIRRARAAEEERSRVDRSVRLMATAMTAKACAMVEEFVARSRRMAGRVAELRKSAKECEERIGRLNERSALLESDGRLATQETREVREQLKDAEGELEAAREKGRVLEARLGTLEEECLEAQNAQELLRNLVEAEEARRVSVEQRLVDVTHKGEAV----KNRRMSLERKLDVAERAREELSATVVSTA 3285
G QQQ A +P GA +A PK PFR + QLPRTPLSS G+ R GSRAR++ S TKIPR S FARS P +P G+STP + XXXXXXXXXX G + D ++ EE ILAAFA+TPK++RTPP+G+ + A +RPV +SA L P A + + G + + + G+ + P+ R+ ++ EP E +FG +K+AR PPR V E A G++A P ++G+ G + G S L+ + + Q Q +P A A PE+ + SP + +S S +SS NAANVRSL GS + D G G G LTPAAFK S MRTPSTGM++ AP + +V M+SLD TAH +PAPR A RA N A R++SS+ EAXXXXXXXXXXXXXXXXXXXXXXXXX A GP R S P AD + A S P + AV +A + DAE V +PFV SQK+ARTP A AV A K +++ + AT G D R + +PE V A DPFAS+S +PRTP ++ + S +A GE G + G +G AR++IGEL QE+A MADRL KQ ER+RLA+VAF+AQDE +LR+QLEE Q+R+ + G D ++TSG + G G GP AGRG D R+++LEI+K E ALD RA+VRELT S EA EKMLEE RR + C+QDERAI EHQ K KLF A+ AEI RA+A+EEER R ++ VR A A+ +A +V E VAR+ RM+ RVA R ++ + + L ERSALLE+ GR A E VREQL A +LEAA+E LEARLG+LE+EC EA AQE LR VE + E+RL +V H GE V + RR S ER+L +AER+R+EL+ S A
Sbjct: 31 GQPQQQRASGIPPVGAPAPAAAPPKDPFRTKRQLPRTPLSSKTGN--------RLPGSRARASPSVTKIPRPSPFARSGSPARSPPAAGVSTPTGSXXXXXXXXXXXXA-------GAVGEIVTTPAADTKRIEEEILAAFARTPKVARTPPKGSAPQGGQEAAGGARPVPR----LSAKLPEPAAFGGQPGGVGQQHLNGSRIPPQAEAEAGRVPDEDPS------RRPVAVEPAFESVFGGRAKVARNPPRTVDAALSTNKEGAAEAGQQAAANPEGGYSGLHGGCGSNGGQEEKEGESTSGLNDAKESQRQQQRSGFG-----VPSVTAAAHAPLPAAPERAGVRDAAAGGSPCRLASPSVSTDSSFTNAANVRSLAGSSSKAP-------DVVGRSGFCGALTPAAFKGLTSAMRTPSTGMERRGAPAN-EVPQMKSLDAAVAPTAHHKPAPRGPSAARAMNRAAPPRPRYASSVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEA---------GPTARDTEPITSSGGPFXXXXXXXXXXXXXXXXXXXADTSGPPASLSAPPPSE--AVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPGESGNGRNDAELDV-DPFVRSQKIARTPTRGPAVGAVPRGVAPATDVAEKAVVDETAASGVTATHGVVVGDTQDGDSDAVPGTERRTEEATPEVGVEGEGSPEAPAGDPFASRSNIPRTPTDQVAPPRES----LAQERGERG-DAGPMGEEEARLRIGELHQELACMADRLTKQAEERNRLADVAFEAQDEVIKLRQQLEEFQQRERQNGGDGAPSDATSG-------SNGEGGGPSWEGVTAGRGEDETDARVLQLEIEKLETXXXXXXXXXXXXXXXXXXXXXXXALDXXRAKVRELTLSAEAQREKMLEEKLRRDRERCKQDERAIEEHQIKVKLFIANKRAEILRAQASEEERLRAEQVVRSAAVAVAGRAFEVVRELVARNARMSRRVAGWRAIVEKRQRHVSELKERSALLEASGRSAQDEAEAVREQLARAMEDLEAAKESSGELEARLGSLEKECQEAHTAQERLRKWVEK------AGERRLSEVKHDGENVIGIERARRQSTERRLGLAERSRDELAVAAASAA 1118
BLAST of mRNA_M-pyrifera_M_contig679.16380.1 vs. uniprot
Match: D8LAV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV4_ECTSI) HSP 1 Score: 323 bits (827), Expect = 5.270e-88 Identity = 402/1075 (37.40%), Postives = 516/1075 (48.00%), Query Frame = 1
Query: 37 GAQQQQHARAVPAAGACESESALPKGPFRMRHQLPRTPLSSMKGSNNDNNTSGRFAGSRARSATSATKIPRSSHFARSARPVHTPGLSTPAANAAXXXXXXXXXXXXNGDKADNMSGGWKASSPVDARQAEEAILAAFAKTPKMSRTPPRGTGLETNTNATSRPVVHRDACVSAALVAPVAPAXXXXAMSHKARPGPKSSS-PSSTQLGKGAETQPNPPP---------RVP-----RQALSFEPPAELIFGRSSKLARTPPRAVG------DEANASVGREAMPLPVESHAGIAAGYLNREGNGASFQPIPSTLHTSSKDQAQXXXXXXXXXXXLLPPAPALARGT-GRLPEQQQTAASTGASSPWQCSSSPTSLNSSDCNAANVRSLMGSVQRPTAHAAGGGDGAGGGLRGVLTPAAFKDYASGMRTPSTGMKQLEAPGDGKVLPMRSLDPVNTTTAH-QPAPRAAMAPRARNGKAATGFRFSSSIEAXXXXXXXXXXXXXXXXXXXXXXXXXAETANGATEQVKPATEGPRERPVNYSVKSNVPAAAETAVVAVAVNNVADNARKSAVRSVPAREKEAAVDSAVAD------GECAKGSFDRVCESDTLDDATRKADQ------DAEQAVLNPFVSSQKLARTP---------PAAVASSAVVAITGAA--------------VAHVSKGAEAFCSSNPLEATRAAAPGAGDDRARQESPEPRVAADPFASKSRVPRTPVEKATVSQLSHGAAMAGAGGETGVEVGEVGGMA---ARVQIGELRQEVASMADRLAKQXXERSRLAEVAFKAQDEAAQLREQLEEIQKRQEL-GADKNSKESTSGGALFPCGAVGGGSGPGAAGRGSDFAGDRLMELEIQKWECELGKEEAEKEAREANL-------ALDEARAEVRELTCSKEAMHEKMLEENYRRAQALCEQDERAILEHQAKAKLFAADTMAEIRRARAAEEERSRVDRSVRLMATAMTAKACAMVEEFVARSRRMAGRVAELRKSAKECEERIGRLNERSALLESDGRLATQETREVREQLKDAEGELEAAREKGRVLE 3054
G QQQ +P GA +A PK PFR + QLPRTPLSS G+ R GSRAR++ S TKIPRSSHFARSA P +P PAA+ + XXXXXXXX G + D ++ EE +LAAFA+TPK++RTPP+G+ A A AP A + +PG P+ +++ AE RVP R ++ EP E +FG +K+ARTPP+ V + A VG++ P ++G+ G + G + L+ + + Q Q +P A A A PE+ + SP + +S S +SS NAANVRSL GS + A GG GGG G LTPAAFK S MRTPSTGM++ AP + +V M+SLD TAH +PAPR A RA N A R++SS+ XXXXXXXXXXXXXXXXXXXX A +P T A A + + +VPA E A+ A GE G A + DAE V +PFV SQK+ARTP P VA + VA T AA VAH ++ +A A P G + R SPE DPFAS+S +PRTP ++ + S GGE VE G+ G M AR++IGEL QE+A M DRL KQ ER+RLA+VAF+AQDEA +LR+QLE+ Q+R+ G D ++TSG A D R+++LEI+K E E ALDEARA+VRELT S EA EKMLEE RR + C+QDERAI EHQ K KLF A+ AEI RA+A+E+ER R ++ VR A A+ +A +V E V+R+ RM+ RVA R +E + R+ L ERSALLE+ GR A E VREQL A +LEAA+E LE
Sbjct: 31 GRPQQQRVSGIPPVGAPAPAAAPPKDPFRTKRQLPRTPLSSKTGN--------RLPGSRARASPSVTKIPRSSHFARSASPARSP----PAASVSTPTGXXXXXXXXXXXXXXXAVGEIVTTPAADTKRIEEEMLAAFARTPKVARTPPKGSAXRGGQEA-----------AGGARPAPRLSAKTPEPAAFGGQPGGVGQQHPNGSRIPPQAEAXXXXXXXXXXXXXXGRVPDEDPSRGPVAAEPAFESVFGGRAKVARTPPQRVDAVLSTEKKGAAGVGQQVAANPEGGYSGLHGGGGSNGGQEEREGESKAGLNDAQESQRQQQRSGFG-----VPSATAAAHAPLPAAPERAGVRDAAAGGSPARLASPSVSTDSSFTNAANVRSLAGSSSK--APDVVGGRPGGGGFCGALTPAAFKGLTSAMRTPSTGMERRGAPAN-EVPQMKSLDAAVAPTAHHKPAPRGPSAARAMNRAAPPRPRYASSVAEAKAAAXXXXXXXXXXXXXXXXXXXXXXEAGPTARDTEPITSSGGRFAAXXXXXXXXXXXXXXXXSADTSGPPASPSAPPSSEAVPAAEPGEALGGAGGMAAPSTLGEADPGXXXXXXXXXXXXGAPAGPGESGNGRTDAELGV-DPFVRSQKIARTPTRGPAVGAVPRGVAPATDVAETAAADETAAAGVTTTHGAVAHGTQDGDADAVPGTEIRPEEATPEVGVEGER--SPEA-PGGDPFASRSNIPRTPTDQVAPPRES----FVQEGGER-VERGDAGPMGEGEARLRIGELHQELACMTDRLTKQAEERNRLADVAFEAQDEAIKLRQQLEQFQQRERKNGGDGAPSDATSGXXXXXXXXXXXXXXXXCA---EDETDARVLQLEIEKLETEXXXXXXXXXXXXXXXXXXXXXXALDEARAKVRELTLSAEAQREKMLEEKLRRDREQCKQDERAIEEHQIKVKLFIANKRAEILRAQASEKERLRAEQVVRSAAVAVAGRAFEVVRELVSRNARMSRRVAGWRAIVEERQRRVSELKERSALLEASGRSAQDEAEAVREQLARAMEDLEAAKESSGELE 1062
BLAST of mRNA_M-pyrifera_M_contig679.16380.1 vs. uniprot
Match: D8LAV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV5_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 7.140e-13 Identity = 83/216 (38.43%), Postives = 95/216 (43.98%), Query Frame = 1
Query: 4540 PSAPSKASFNTNKRDLLTTSLSPIPEVVPHKRPRKLLGAGTSRCMTPKRKVGAGLSLPREENGGVAAMAAPVAATVAAATAGTGGAPVTAAPGVALHAATRPPAAAGGVGPRSGAARLSGGVSHAPTASLRGLTAGSGVEAAAQGPARGGSQGAGG---ERLVSKPTSKPQKLSTNSILGLRGKSSKFSNRGSLFKGFLDPKNGFKVPKLKAGVRR 5178
PSAP K S DLLTT LSPI P KRPRKLLG GTSRC TP+ A GVGP+SG S A A+ RG+ AG PA GG+ + KP KP KLST SIL +RGKS +++ +LFKGFLDPK GFKVPKLK G +R
Sbjct: 205 PSAP-KPSTKGKGEDLLTTKLSPIAP--PPKRPRKLLGGGTSRCKTPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------XXXXXXXXXXARGVGPKSGGXXXXXXXS-ANVAAARGMVAGGVATGVRPSPAVGGNXXXXXXXXDAAAVKPAFKPLKLSTTSILAMRGKS---TSKTALFKGFLDPKKGFKVPKLKVGAKR 395 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig679.16380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig679.16380.1 >prot_M-pyrifera_M_contig679.16380.1 ID=prot_M-pyrifera_M_contig679.16380.1|Name=mRNA_M-pyrifera_M_contig679.16380.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1724bp MPKSVASSGAQQQQHARAVPAAGACESESALPKGPFRMRHQLPRTPLSSMback to top mRNA from alignment at M-pyrifera_M_contig679:12034..27316- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig679.16380.1 ID=mRNA_M-pyrifera_M_contig679.16380.1|Name=mRNA_M-pyrifera_M_contig679.16380.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=15283bp|location=Sequence derived from alignment at M-pyrifera_M_contig679:12034..27316- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig679:12034..27316- >mRNA_M-pyrifera_M_contig679.16380.1 ID=mRNA_M-pyrifera_M_contig679.16380.1|Name=mRNA_M-pyrifera_M_contig679.16380.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=10344bp|location=Sequence derived from alignment at M-pyrifera_M_contig679:12034..27316- (Macrocystis pyrifera P11B4 male)back to top |