prot_M-pyrifera_M_contig6786.16370.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6786.16370.1
Unique Nameprot_M-pyrifera_M_contig6786.16370.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length91
Homology
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: D8LRD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD4_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 7.680e-31
Identity = 56/68 (82.35%), Postives = 56/68 (82.35%), Query Frame = 0
Query:   23 MAKRXXXXXXXXXXXGAAAKGGPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 90
            MAKR           GAAAKGG NQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG
Sbjct:    1 MAKRARPQRPAAGARGAAAKGGNNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 68          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A835YZ77_9STRA (Transporter Sec61 subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ77_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.850e-20
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 0
Query:   11 RAAKPAGAAGASMAKRXXXXXXXXXXXGAAAKGG-PNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 90
            R AKPAGAAG +  +R            AA  GG P Q GI++FY++D+PG ++GP ++L+FSL+FIGCVVLLHIWGK +G
Sbjct:   10 RQAKPAGAAGTAAQRRGSRGKP------AAGGGGRPQQGGILQFYSEDSPGFQVGPNIILIFSLSFIGCVVLLHIWGKLRG 84          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A7S3XTM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTM9_HETAK)

HSP 1 Score: 80.9 bits (198), Expect = 6.920e-18
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0
Query:   39 AAAKGGPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFK 89
            AA   G  QQGI+RFYTD+APGL+IGPT VL FS++FIG VVLLHIWGKF+
Sbjct:   57 AAGGRGGGQQGILRFYTDEAPGLKIGPTAVLFFSVSFIGVVVLLHIWGKFR 107          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A7S3V0E6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V0E6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 9.400e-17
Identity = 33/50 (66.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:   40 AAKGGPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFK 89
            A++ GP+ +  +RFYTDDAPGL++GPT VLVFS+ FIG VV+LHIWGKF+
Sbjct:   51 ASRQGPSTRDTLRFYTDDAPGLKVGPTTVLVFSVMFIGFVVMLHIWGKFR 100          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A024GLR5_9STRA (Protein transport protein Sec61 subunit beta n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLR5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.450e-16
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    8 LSNRAAKP----AGAAGASMAKRXXXXXXXXXXXGAAAKGGPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 90
            LSN+   P    AG+A + + KR      XXXXX     GG +  GI+RFYTDD+PGL+IGPT VLV  L F+G VVLLH+WGKF+G
Sbjct:    6 LSNKKPAPSAAEAGSAASGLRKRPQASAKXXXXXXXRGMGG-SSAGILRFYTDDSPGLKIGPTTVLVLCLVFVGLVVLLHVWGKFRG 91          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A024TNF2_9STRA (Protein transport protein Sec61 subunit beta n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TNF2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.710e-16
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0
Query:   44 GPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 90
            G +  G++RFYTDDAPGLR+GPT VLV +L F+G VVLLH+WGKF+G
Sbjct:   38 GGSSAGVLRFYTDDAPGLRVGPTTVLVGALLFVGFVVLLHVWGKFRG 84          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A485LI25_9STRA (Protein transport protein Sec61 subunit beta n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LI25_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.630e-16
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0
Query:   44 GPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 90
            G +  G++RFYTDDAPGL++GPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   40 GGSSAGVLRFYTDDAPGLKVGPTTVLVMCLMFVGFVVLLHVWGKFRG 86          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: I2CQ18_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ18_NANGC)

HSP 1 Score: 76.3 bits (186), Expect = 4.330e-16
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0
Query:   38 GAAAKGGPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKF 88
            G   +GG +  GI+RFY+D+APGLR+GP VVLV SLAFIG VVLLHIW KF
Sbjct:   53 GGGNRGGASSAGILRFYSDEAPGLRVGPQVVLVSSLAFIGVVVLLHIWAKF 103          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A8K1CUR3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUR3_PYTOL)

HSP 1 Score: 75.5 bits (184), Expect = 5.870e-16
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 0
Query:   44 GPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 90
            G +  GI+RFYTDD+PGL+IGPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   45 GGSSAGILRFYTDDSPGLKIGPTTVLVLCLMFVGFVVLLHVWGKFRG 91          
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Match: A0A5D6XV10_9STRA (Protein transport protein Sec61 subunit beta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV10_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.900e-16
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 0
Query:   44 GPNQQGIMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG 90
            G +  GI+RFYTDD+PGL+IGPT VLV  L F+G VVLLH+WGKF+G
Sbjct:   43 GGSTAGILRFYTDDSPGLKIGPTTVLVMCLLFVGFVVLLHVWGKFRG 89          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6786.16370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRD4_ECTSI7.680e-3182.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZ77_9STRA3.850e-2053.09Transporter Sec61 subunit beta n=1 Tax=Tribonema m... [more]
A0A7S3XTM9_HETAK6.920e-1872.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3V0E6_9STRA9.400e-1766.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A024GLR5_9STRA1.450e-1654.02Protein transport protein Sec61 subunit beta n=1 T... [more]
A0A024TNF2_9STRA1.710e-1668.09Protein transport protein Sec61 subunit beta n=2 T... [more]
A0A485LI25_9STRA3.630e-1665.96Protein transport protein Sec61 subunit beta n=2 T... [more]
I2CQ18_NANGC4.330e-1668.63Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A8K1CUR3_PYTOL5.870e-1668.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XV10_9STRA7.900e-1668.09Protein transport protein Sec61 subunit beta n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR030671Protein transport Sec61-beta/SbhPIRSFPIRSF006398Sec61_betacoord: 8..90
e-value: 4.7E-23
score: 79.4
IPR030671Protein transport Sec61-beta/SbhPANTHERPTHR13509SEC61BETA-PROV PROTEINcoord: 10..89
IPR016482Protein transport protein SecG/Sec61-beta/SbhPFAMPF03911Sec61_betacoord: 48..86
e-value: 3.3E-19
score: 68.6
NoneNo IPR availablePANTHERPTHR13509:SF3PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETAcoord: 10..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 63..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6786contigM-pyrifera_M_contig6786:9634..13517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6786.16370.1mRNA_M-pyrifera_M_contig6786.16370.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6786 9634..13517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6786.16370.1 ID=prot_M-pyrifera_M_contig6786.16370.1|Name=mRNA_M-pyrifera_M_contig6786.16370.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp
PKPAGEGLSNRAAKPAGAAGASMAKRGRPQRPAAGARGAAAKGGPNQQGI
MRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKFKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030671Sec61-beta/Sbh
IPR016482SecG/Sec61-beta/Sbh