mRNA_M-pyrifera_M_contig67780.16355.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: A0A812K8E8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812K8E8_9DINO) HSP 1 Score: 130 bits (327), Expect = 1.540e-31 Identity = 70/176 (39.77%), Postives = 102/176 (57.95%), Query Frame = 1
Query: 286 SVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSV-------PMVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTP 792
+ RV K+VY+ + F+LLH+LEGRW+GD + ++ P VV+ L +D W E Q + G++ Q IP DG+C+V + GT A + L+E + +V+L+TA S ATGKP++VET+ +VD RR RT+QRFD SG +E RV D+V GA+ P
Sbjct: 208 NAARVFKQVYIAQVGKFQFRLLHRLEGRWNGDAQVLTAAGTAPASPRVVAVGLKWDDDLNVWEETQSITDAAGMASAQTLQLIPVADGVCKVVQK-GTSAWGDVDMELREESAHVLLLTATSHATGKPILVETVTVVDDMRRVRTVQRFDTSGAFQCLYCFKERRVIDAVTGALVP 382
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: D0MSF1_PHYIT (Ubiquitin-like domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0MSF1_PHYIT) HSP 1 Score: 122 bits (307), Expect = 1.910e-29 Identity = 88/269 (32.71%), Postives = 130/269 (48.33%), Query Frame = 1
Query: 1 RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGAMTALEPTSSSSSSTPSTALTSRYGGVLSRPIQRFSPGGAMGRGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSVP----MVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
+TLG +GITDG L + A+H H +Y E ++RRK E+ E ++ S + ++SR + P + GR G +F +L +EGRW+G+ M V S DL F W +RQ GL+ Q P DG+ ++E D P+ G+ +T++E+ NVI++TA S +G+PL+VETI +DS+RR RTIQRFD SG + E RV D+V+GA+ Y
Sbjct: 65 KTLGELGITDGDVLVHIEAAHQPFHP----LNYKHLAESIKNRRKHEDNNMQMLKEDNIWAAGSDGTVHRLGMEKSIISRSLNGSLPPHFATKKAGSGRAFFNQLSVRVNGCSFHVLPSMEGRWNGELTTMPPQDEGSQVCSNDLIFRDDEGVWSQRQSRTTMSGLTSMQHMWIKPVSDGILKIETDD--PSLRGSDITMQELGTNVIIITATSKRSGRPLMVETITGIDSSRRLRTIQRFDESGAFRSVYVMNEVRVVDAVSGAMEKY 327
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: H3GXS5_PHYRM (Ubiquitin-like domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXS5_PHYRM) HSP 1 Score: 117 bits (292), Expect = 3.110e-27 Identity = 93/273 (34.07%), Postives = 133/273 (48.72%), Query Frame = 1
Query: 1 RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGAMTALEPTSSSSSSTPSTALTSRYGGVLSRPIQRFSPGGAMG----RGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDC----EGMSVPMVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
+TL +GITDG L + A+H H +Y E + RRK E+ AM L+ + ++ T G+ I R GGA + + GR G +F +L +EGRW+G+ E V S DL F W +RQ GL+ Q P DG+ ++E D P+ G+ +T++E+ NVI+VTA S +G+PL+VETI +DS+RR RTIQRFD SG + E RV D+V+GA+ Y
Sbjct: 70 KTLAELGITDGDVLVHIEAAHQPFHP----LNYKLLAESIKSRRK-HEDAAMQMLKQDNIWAAGADGTV---HRLGMDKSIISRSPNGGASAHFTPKQATKGRAFFNQLSVRVNGCSFHVLPSMEGRWNGELATIPEQDEGSQVCSNDLVFRDDEGVWSQRQSRTTMSGLTSMQHMWIKPVSDGILKIETDD--PSLRGSDITMQELGTNVIIVTATSKRSGRPLMVETITGIDSSRRLRTIQRFDESGGFRSVYVMNEVRVVDAVSGAMEKY 332
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: A0A0P1ASR6_PLAHL (Ubiquitin domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASR6_PLAHL) HSP 1 Score: 115 bits (289), Expect = 7.830e-27 Identity = 86/271 (31.73%), Postives = 130/271 (47.97%), Query Frame = 1
Query: 1 RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGAMTALEPTSSSSSSTPSTALTSRYGGVLSRPIQRFSPGGAMGRGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSVP------MVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
+TL +GITDG L + A+H +Y E R+RRK E+ E ++ S + ++SR + P + S GR G ++ +L +EGRW+G+ ++P V S DL F W +RQ GL+ Q P DG+ ++E D P G+ +T++E+ NV+++TA S +G+PL+VETI +DS+RR RTIQRFD SG + E RV D+V+GA+ Y
Sbjct: 66 KTLAELGITDGDVLVHIEAAHQPFQP----LNYKLLAESIRNRRKHEDSNMQMLKEDNIWAAGSDGTVHRLGMEKSIISRSLNGSVPPPFNHKKASKGRAFFNQLSVRVNGCSYHVLPSMEGRWNGELT--TIPPQEEGSQVCSNDLLFRDDECVWSQRQSRTTMSGLTSMQHMWIKPVSDGILKIETDD--PLLRGSDITMQELGTNVLIITATSKRSGRPLMVETITGIDSSRRLRTIQRFDESGAFRSVYVMNEVRVVDAVSGAMEKY 328
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: A0A8J5J4K9_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J4K9_9STRA) HSP 1 Score: 116 bits (291), Expect = 9.330e-26 Identity = 86/271 (31.73%), Postives = 130/271 (47.97%), Query Frame = 1
Query: 1 RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGAMTALEPTSSSSSSTPSTALTSRYGGVLSRPIQRFSPGGAMGRGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSVP------MVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
+TL +GITDG L + A+H H +Y E ++RRK E+ E ++ S + ++SR + P + GR G ++ +L +EGRW+G+ ++P V S DL F W +RQ GL+ Q P DG+ ++E D P+ G+ +T++E+ NVI++TA S +G PL+VETI +DS+RR RTIQRFD SG + E RV D+V+GA+ Y
Sbjct: 2037 KTLAELGITDGDVLVHIEAAHQPFHP----LNYKLLAESIKNRRKHEDNNMQMLKEDNIWAAGSDGTVHRLGMEKSIISRSLNGSLPPHFSTKKAGSGRAFFNQLSVRVNGCSYHVLPSMEGRWNGELT--TIPPQDEGSQVCSNDLIFRDDEGVWSQRQSRTTMSGLTSMQHMWIKPVSDGILKIETDD--PSLRGSDITMQELGTNVIIITATSKRSGCPLMVETITGIDSSRRLRTIQRFDESGAFRSVYVMNEVRVVDAVSGAMEKY 2299
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: A0A3F2RJS8_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJS8_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.040e-25 Identity = 84/276 (30.43%), Postives = 133/276 (48.19%), Query Frame = 1
Query: 1 RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGAMTALEPTSSSSSSTPSTALTSRYGGVLSRPI-----QRFSPGGAMGRGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSVP------MVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
+TL +GITDG L + +H H +Y E ++RRK E+ E ++++ + ++SR + Q F+P + GR G ++ +L +EGRW+G+ ++P V S DL F W +RQ GL+ Q P DG+ ++E D P+ G+ T++E+ NVI++TA S +G+PL+VETI +D++RR RT+QRFD SG + E RV D+V+GA+ Y
Sbjct: 62 KTLAELGITDGDVLVHIEPAHQPFHP----LNYKLLAESIKNRRKHEDSNMQMLKEDNIWAAAADGTVHRLGMEKSIISRSMNGTSSQHFTP-----KKVGTGRAFFNQLSVRVNGCSYHVLPSMEGRWNGELT--TIPPQDEGSQVCSNDLVFRDDEGVWSQRQSRTTMSGLTSMQHMWIKPVSDGILKIETDD--PSLRGSDTTMQELGTNVIIITATSKRSGRPLMVETITAIDNSRRLRTVQRFDESGAFRSVYVMNEVRVVDAVSGAMEKY 324
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: M4BPQ0_HYAAE (Ubiquitin-like domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPQ0_HYAAE) HSP 1 Score: 112 bits (280), Expect = 1.600e-25 Identity = 86/274 (31.39%), Postives = 127/274 (46.35%), Query Frame = 1
Query: 1 RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGAMTALEPTSSSSSSTPSTALTSRYG---GVLSRPIQRFSPGGAMGRGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSVP------MVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
+TL +GITDG L + + H +Y E ++RRK EE E S R G ++SR + P + GR G +F +L +EGRW+G+ ++P V S +L F W +RQ GL+ Q P DG+ ++E D P G+ +T++E+ NVI++TA S +G+P++VETI +DS+RR RTIQRFD SG + E RV D+V+GA+ Y
Sbjct: 74 KTLAELGITDGDVLVHLEVAQQPFHP----LNYKVLAESIKNRRKHEEVNMQMLKEG---------SDGTVHRLGMEKSIISRSLNSSLPSHFAKQNVGAGRAFFNQLSVRVNGCSFHVLPSMEGRWNGELA--TIPPQDEGSQVCSNELVFRDDEGVWSQRQSRTTMSGLTSTQHMWIKPVSDGILKIETDD--PTLRGSDITMQELGTNVIIITATSKRSGRPMMVETITGIDSSRRLRTIQRFDESGAFRSVYVMNEVRVVDAVSGAMEKY 330
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: T0RKI6_SAPDV (Ubiquitin-like domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RKI6_SAPDV) HSP 1 Score: 110 bits (274), Expect = 7.970e-25 Identity = 68/195 (34.87%), Postives = 105/195 (53.85%), Query Frame = 1
Query: 229 VLSRPIQRFSPGGAMGRGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSVP------MVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
++SR + +P + R S GR G ++ +L +EGRW+G+ E S+P V S +L F + W RQ GL+ Q P DG+ ++E D P+ G+ +T++EV N++++TA S TG+P++VETI +DSTRR RT+QRFD +G + E RV D+V+GA+ Y
Sbjct: 121 IISRSSPKSTP---LPRQKSSGRTFFNQVSVLVNGCSYHVLPSMEGRWNGELE--SIPSQDEGTQVCSCELTFREEEGVWNLRQMRTSISGLTTTQHLWIKPAADGVLKLETDD--PSLRGSDITMREVGANILIITATSKRTGRPVMVETITSIDSTRRLRTVQRFDETGGFRFVYVMNERRVVDAVSGAMERY 308
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: A0A8K1CC55_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC55_PYTOL) HSP 1 Score: 109 bits (273), Expect = 1.350e-24 Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 1
Query: 307 RVYLCEARGHTFKLLHQLEGRWHGDCEGMSVP------MVVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPYQ 798
RV C T+ +L LEGRW+G+ +VP V S DLAF W +RQ GL+ Q + P DG+ ++E D P + +T++E+ NVI++TA S TG+P++VET+ ++D++RR RTIQRFD SG + E RV DSV+GA+ Y+
Sbjct: 160 RVNAC-----TYHVLPALEGRWNGELA--TVPPKEDGNQVCSMDLAFRDDEGVWSQRQSRTTISGLTSTQHFWIKPVADGILKIETDD--PTLRNSDITMQELGLNVIIITATSKRTGQPIMVETMTVIDTSRRIRTIQRFDESGAFRSVYVMNERRVMDSVSGAMEKYE 320
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Match: A0A484E4H0_BRELC (Ubiquitin-like domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4H0_BRELC) HSP 1 Score: 108 bits (271), Expect = 3.500e-24 Identity = 85/271 (31.37%), Postives = 129/271 (47.60%), Query Frame = 1
Query: 1 RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGAMTALEPTSSSSSSTPSTALTSRYGGVLSRPIQRFSPGGAMGRGGSVGRVLKRVYLCEARGHTFKLLHQLEGRWHGDCEGMSVPM------VVSTDLAFDQAARQWRERQRFVEEDGLSREQIYVFIPTGDGMCRVERPDGTPARMGAQVTLKEVTENVILVTARSLATGKPLVVETIVMVDSTRRTRTIQRFDASGRAAKPVHIRETRVFDSVAGAVTPY 795
+TL +GITDG L + A+H +Y E ++RRK E+ E ++ S + ++SR + P + R G +F +L +EGRW+G+ ++VP+ V S+DL F W +RQ GL+ Q DG+ ++E D P +++T++E+ NVI+ TA S TG+PL+VETI +DS+RR RTIQRFD SG + E RV D+V+GA+ Y
Sbjct: 75 KTLAELGITDGDVLVHIEAAHQPFQP----LNYRLLAESIKNRRKHEDTNMQMLKEDNIWAAGSDGTVHRLGMEKSIVSRSQHKSVPLPFGSKHAGKSRAFFNQLSVRVNGCSFHVLPSMEGRWNGEL--ITVPLQDEGSQVCSSDLVFRDDEGVWSQRQSRTTMSGLTSMQHMWIKAVSDGILKIETDD--PTLRDSEITMQELGLNVIITTATSKRTGRPLMVETITGIDSSRRLRTIQRFDESGAFRSVYVMNEVRVVDAVSGAMEKY 337 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67780.16355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67780.16355.1 >prot_M-pyrifera_M_contig67780.16355.1 ID=prot_M-pyrifera_M_contig67780.16355.1|Name=mRNA_M-pyrifera_M_contig67780.16355.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp RTLGSVGITDGSELHQVAASHTTSHGHRDYASYSAELERARDRRKSEEEGback to top mRNA from alignment at M-pyrifera_M_contig67780:324..1247- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67780.16355.1 ID=mRNA_M-pyrifera_M_contig67780.16355.1|Name=mRNA_M-pyrifera_M_contig67780.16355.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig67780:324..1247- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67780:324..1247- >mRNA_M-pyrifera_M_contig67780.16355.1 ID=mRNA_M-pyrifera_M_contig67780.16355.1|Name=mRNA_M-pyrifera_M_contig67780.16355.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig67780:324..1247- (Macrocystis pyrifera P11B4 male)back to top |