mRNA_M-pyrifera_M_contig6774.16344.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: D8LGE8_ECTSI (EDR2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGE8_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.460e-69 Identity = 107/154 (69.48%), Postives = 124/154 (80.52%), Query Frame = 1
Query: 1 MEAGSTVPQTHCATSDGAGMPPHSWSHVTAEKFLVRQGPNYLKTKRKAKS-GDSFYEVRGVDWYRAGKKVDGVGSLV---DLPEPEFSHPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARALEDLETADPSLRLLVGYFR 450
ME +TVPQ C ++DGAGMPPHSWS + AEKF+VR GPNY K KRK ++ G SFYE R +DWYR KVDGV L LPE +FSHPSVPSLLVVNVQLPME+P+ FKGAKLDGPTLHAVFY TL+EETA+AL+DLE+A+PS+RLL YFR
Sbjct: 1 MEVRATVPQVDCPSADGAGMPPHSWSQLDAEKFMVRHGPNYSKNKRKGRNAGGSFYEARAMDWYRGTGKVDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLPMESPQAFKGAKLDGPTLHAVFYLTLREETAKALQDLESAEPSVRLLAEYFR 154
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A835ZBF7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF7_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.230e-28 Identity = 63/133 (47.37%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 7 AGSTVPQTHCATSDGAGMPPHSWSHVTAEKFLVRQGPNYLKTKRKAKSGDSFYEVRGVDWYR-AGKKVDGVGSLVDLPEPEFS--HPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARAL 396
AG+++PQ A + G H W+ A F+VR GPNY + K S + YEV VDW+ AG+K D VG+ V LP P + HPS+PS+++VN QLP+EAP + A LDGPTL VFY L E ARAL
Sbjct: 169 AGASLPQLAAAAAHGEHPLTHCWAPTKASSFMVRHGPNYKRRGLKVPSAPALYEVVAVDWFTCAGRKADNVGARVLLPAPPHASPHPSIPSIIIVNAQLPLEAPSMVAPA-LDGPTLQCVFYLALSAEAARAL 300
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A7S2W974_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W974_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.250e-21 Identity = 54/131 (41.22%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 67 HSWSHVTAEKFLVRQGPNYLKTKRKAKSGDSFYEVRGVDWYRAGKKVDGVGSLVDLPEPEFSHP---SVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARALEDLETADPSLRLLVGYFR 450
H+W ++F +R GPNY K RK SG E+ VD +++ V +G + LPEP P +VP + VV+ LP EAP + + +GPTL+AVFYF L+EET +AL LETA +++LL + R
Sbjct: 80 HAWEPGDHQRFRLRVGPNYKKYGRKEPSGPVLLELLEVDLFKSSALVHNLGEFIALPEPRVPVPEGSAVPPIFVVHGSLPFEAPSMLGNS--NGPTLNAVFYFGLREETQQALASLETAPKAVQLLETFCR 208
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A7S3H9C8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9C8_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.210e-14 Identity = 42/136 (30.88%), Postives = 67/136 (49.26%), Query Frame = 1
Query: 61 PPHSWSHVTAEKFLVRQGPNYLKTKRKAKSGDSFYEVRGVDWYRAGKKVDGVGSLVDLPEP--------EFSHPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARALEDLETADPSLRLLVGY 444
P H+W +F VR GP+Y + K+KA S YE VD + + D L +P + HP VPS+ V+ +Q+P + P F + DGP + Y+ + E++ L+DL TA P+++L +
Sbjct: 373 PEHTWCKADYRQFNVRVGPDYNRHKKKAPSAVPIYEPFAVDVFCTKLRADHCSPRFQLLDPASKAPINVDTGHPFVPSVFVIQIQIPSDPPSGFFTSADDGPGWAIMMYYRITEDSLNQLKDLSTASPAIKLFAEW 508
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A2U1PU95_ARTAN (EDR2_C domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PU95_ARTAN) HSP 1 Score: 74.3 bits (181), Expect = 1.250e-12 Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 64 PHSWSHVTAEKFLVRQGPNYLKTKRKAKSGD-SFYEVRGVDWYRAGKKVDGVGSLVDLPEPEFSHPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARAL 396
P SWS + + F +R G NYL+ K+K + + + Y GVD + + KK+D + V+LP S +PS+LVVNVQ+P+ FKG ++DG + V YF L + + L
Sbjct: 481 PDSWSDIEPQTFRIR-GKNYLRDKKKELASNYAAYYPFGVDVFLSQKKIDHIARFVELPVVGASSAEIPSILVVNVQIPLYPASFFKG-EIDGEGISFVLYFKLSDGYTKEL 590
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A6S9LM18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LM18_HETAK) HSP 1 Score: 73.9 bits (180), Expect = 1.270e-12 Identity = 58/165 (35.15%), Postives = 77/165 (46.67%), Query Frame = 1
Query: 1 MEAGSTVPQTHCATSDGAGMPPHSWSHVTAEKFLVRQGPNYLKTKRKAKSGDSFYEVRGVDWYRAGKKVDG---VGSLVDLPEP-EFSHPSVPSLLVVNVQLPMEAPEVF-----KGAKLDGPTLHAVFYFTLKEETARALEDLE------TADPSLRLLVGYFR 450
+EAGST P+ HSW A+ F VRQ P Y T +KA SG +FYE VD +R ++ +G +L P E HP VPS+ VVN Q+P V K + DGP VF+F + E+T L L+ P+LRL + R
Sbjct: 95 VEAGSTFPRNGEDEE-------HSWEPSPADMFRVRQ-PGYSSTGQKAPSGPAFYETLRVDTFRTPERREGRLVPRTLRPCPHTVESGHPDVPSVFVVNCQIPNIDGAVVHSPFNKNPEYDGPCFQIVFHFGITEQTRDWLRQLQEEGAAAAVPPALRLWALWCR 251
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A118JXL2_CYNCS (EDR2_C domain-containing protein n=3 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JXL2_CYNCS) HSP 1 Score: 73.9 bits (180), Expect = 1.610e-12 Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 70 SWSHVTAEKFLVRQGPNYLKTKRKAKSGD-SFYEVRGVDWYRAGKKVDGVGSLVDLPEPEFSHPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARAL 396
SWSHV + F VR G NYL+ K+K + + + Y GVD + + +K+D + V+LP S +PS+LVVNVQ+P+ F+G ++DG ++ V YF L + ++ L
Sbjct: 243 SWSHVEPKTFRVR-GVNYLRDKKKEHAPNYAAYYPFGVDVFLSQRKIDHIARFVELPVVGSSSTELPSILVVNVQVPLYPAAFFQG-EIDGEGMNVVLYFKLSDSYSKEL 350
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: UPI001CB9AB8B (uncharacterized protein LOC122595808 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9AB8B) HSP 1 Score: 73.2 bits (178), Expect = 2.950e-12 Identity = 44/124 (35.48%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 67 HSWSHVTAEKFLVRQGPNYLKTKRKAK-SGDSFYEVRGVDWYRAGKKVDGVGSLVDLPEPEFSHPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARALEDLETADPSLRLL 435
+SWS+V E F +R G NYL+ K+K S + Y GVD + + +K+D + V+LP + S +PS+LVVN+Q+P+ F+G +++G + V YF L + ++ L L+ D R+L
Sbjct: 219 NSWSYVEPEIFRIR-GKNYLRDKKKEHASNTAAYNPFGVDVFLSRRKIDHIARFVELPAVDPSSGELPSILVVNIQIPLYPTAFFQG-EINGEGMSFVLYFKLSDSYSKELS-LQFQDNMRRIL 339
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A2U1N0K6_ARTAN (EDR2_C domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1N0K6_ARTAN) HSP 1 Score: 72.8 bits (177), Expect = 4.470e-12 Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 64 PHSWSHVTAEKFLVRQGPNYLKTKRKAKSGD-SFYEVRGVDWYRAGKKVDGVGSLVDLPEPEFSHPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARAL 396
P SWS + + F +R G NYL+ K+K + + + Y GVD + + KK+D + V+LP S +PS+LVVNVQ+P+ FK ++DG + V YF L + + L
Sbjct: 588 PDSWSDIEPQTFRIR-GKNYLRDKKKELASNYAAYYPFGVDVFLSQKKIDHIARFVELPVVGASSAEIPSILVVNVQIPLYPASFFKS-EIDGEGISFVLYFKLSDSYTKEL 697
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Match: A0A6S7MIF9_LACSI (EDR2_C domain-containing protein n=4 Tax=Lactuca TaxID=4235 RepID=A0A6S7MIF9_LACSI) HSP 1 Score: 72.4 bits (176), Expect = 5.680e-12 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 70 SWSHVTAEKFLVRQGPNYLKTKRKAKSGD-SFYEVRGVDWYRAGKKVDGVGSLVDLPEPEFSHPSVPSLLVVNVQLPMEAPEVFKGAKLDGPTLHAVFYFTLKEETARAL 396
SWS+V + F VR G NYL+ K+K + + + Y GVD + + K+D + V+LP E S +PS+LVVNVQ+P+ F+G ++DG ++ V YF L E ++ L
Sbjct: 226 SWSNVEPKTFRVR-GDNYLRDKKKEHAPNYAAYYPFGVDVFLSQTKIDHIARFVELPVLESSSGDLPSILVVNVQVPLYPCAFFQG-EIDGEGMNVVLYFKLSETYSKQL 333 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6774.16344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6774.16344.1 >prot_M-pyrifera_M_contig6774.16344.1 ID=prot_M-pyrifera_M_contig6774.16344.1|Name=mRNA_M-pyrifera_M_contig6774.16344.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp MEAGSTVPQTHCATSDGAGMPPHSWSHVTAEKFLVRQGPNYLKTKRKAKSback to top mRNA from alignment at M-pyrifera_M_contig6774:10076..13389+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6774.16344.1 ID=mRNA_M-pyrifera_M_contig6774.16344.1|Name=mRNA_M-pyrifera_M_contig6774.16344.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3314bp|location=Sequence derived from alignment at M-pyrifera_M_contig6774:10076..13389+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6774:10076..13389+ >mRNA_M-pyrifera_M_contig6774.16344.1 ID=mRNA_M-pyrifera_M_contig6774.16344.1|Name=mRNA_M-pyrifera_M_contig6774.16344.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig6774:10076..13389+ (Macrocystis pyrifera P11B4 male)back to top |