mRNA_M-pyrifera_M_contig67647.16329.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: H3G703_PHYRM (Ribosomal protein L37 n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3G703_PHYRM) HSP 1 Score: 121 bits (303), Expect = 1.430e-33 Identity = 66/118 (55.93%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGTQ+FG RHNK+HT+CRRCG+SSYHIQKS C+SCGYPAAKMRK NW+ KALRRRTTGSGRMRHLK++ RR KNGFREG
Sbjct: 1 TKGTQSFGMRHNKTHTICRRCGRSSYHIQKSTCSSCGYPAAKMRKY--------------------------------------NWSQKALRRRTTGSGRMRHLKNVQRRFKNGFREG 80
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A6G0WKJ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WKJ3_9STRA) HSP 1 Score: 121 bits (304), Expect = 3.480e-33 Identity = 66/118 (55.93%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGT +FGKRHNKSHT+CRRCGKSSYHIQKS C SCGYPAAKMRK NW+ KALRRRTTG+GRMR+LK +PR+ KNGFREG
Sbjct: 2 TKGTSSFGKRHNKSHTICRRCGKSSYHIQKSTCGSCGYPAAKMRKY--------------------------------------NWSVKALRRRTTGTGRMRYLKTVPRKFKNGFREG 81
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A4S2N5B7_9PEZI (Ribosomal protein L37 n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N5B7_9PEZI) HSP 1 Score: 119 bits (299), Expect = 8.740e-33 Identity = 65/118 (55.08%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGT +FGKRHNKSHTLCRRCG+ S+HIQKS C+SCGYPAAK+RKCT P L P P+ +NW+ KA RR+TTG+GRMR+LK + RR KNGF+ G
Sbjct: 2 TKGTSSFGKRHNKSHTLCRRCGRRSFHIQKSTCSSCGYPAAKVRKCTF--PELDP-------------------------PTTNNWSEKAKRRKTTGTGRMRYLKTVSRRFKNGFQIG 92
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A425D2K7_9STRA (Ribosomal protein L37 n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A425D2K7_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.340e-32 Identity = 63/118 (53.39%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGT ++GKRHNK+HT+CRRCGKSSYHIQKS C SCGYPAAK+RK NW+ KALRRRTTG+GRMR+LK +PR+ KNGFREG
Sbjct: 13 TKGTSSYGKRHNKTHTICRRCGKSSYHIQKSTCGSCGYPAAKLRKY--------------------------------------NWSVKALRRRTTGTGRMRYLKTVPRKFKNGFREG 92
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A024UFB8_9STRA (60S ribosomal protein L37 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFB8_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.790e-32 Identity = 64/118 (54.24%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGT ++GKRHNK+HT+CRRCGKSSYHIQKS C SCGYPAAKMRK NW+ KALRRRTTG+GRMR+LK +PR+ KNGFREG
Sbjct: 53 TKGTSSYGKRHNKTHTICRRCGKSSYHIQKSTCGSCGYPAAKMRKY--------------------------------------NWSVKALRRRTTGTGRMRYLKTVPRKFKNGFREG 132
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A1E1K1L7_9HELO (Related to 60S ribosomal protein L37 n=1 Tax=Rhynchosporium agropyri TaxID=914238 RepID=A0A1E1K1L7_9HELO) HSP 1 Score: 119 bits (299), Expect = 5.770e-32 Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGT +FGKRHNK+HTLCRRCG+ S HIQK C+SCGYPAAK+R+CT + C+G + + + DNW KA RR+TTG+GRMRH+K +PRR KNGF+ G
Sbjct: 50 TKGTASFGKRHNKTHTLCRRCGRRSLHIQKHTCSSCGYPAAKIRQCTFYSTLGQEASICEGQQEE----------VQEANKETDNWGEKAKRRKTTGTGRMRHMKGVPRRFKNGFQTG 157
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A5J4Y7Z1_9CHLO (Ribosomal protein L37 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y7Z1_9CHLO) HSP 1 Score: 117 bits (292), Expect = 7.780e-32 Identity = 62/117 (52.99%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 7 KGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
KGT +FGKR NK+HTLCRRCG+ S+HIQKS C+SCGYPAA++RK NW+AKA+RR+TTG+GRMRHL+DMPRRAKNGFREG
Sbjct: 6 KGTGSFGKRRNKTHTLCRRCGRRSFHIQKSTCSSCGYPAARIRKY--------------------------------------NWSAKAIRRKTTGTGRMRHLRDMPRRAKNGFREG 84
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A3R7ACW7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7ACW7_9STRA) HSP 1 Score: 119 bits (298), Expect = 9.390e-32 Identity = 64/118 (54.24%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGT ++GKRHNK+HT+CRRCGKSSYHIQKS C SCGYPAAKMRK NW+ KALRRRTTG+GRMR+LK +PR+ KNGFREG
Sbjct: 1 TKGTSSYGKRHNKTHTICRRCGKSSYHIQKSTCGSCGYPAAKMRKY--------------------------------------NWSVKALRRRTTGTGRMRYLKTVPRKFKNGFREG 80
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: W2K1Q1_PHYPR (Ribosomal protein L37 (Fragment) n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2K1Q1_PHYPR) HSP 1 Score: 115 bits (289), Expect = 3.070e-31 Identity = 63/116 (54.31%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFR 351
TKGTQ+FG RHNK+HT+CRRCG+SSYHIQKS C+SCGYPAAKMRK NW+ KALRRRTTG+GRMRHLK++ RR KNGFR
Sbjct: 30 TKGTQSFGMRHNKTHTICRRCGRSSYHIQKSTCSSCGYPAAKMRKF--------------------------------------NWSQKALRRRTTGTGRMRHLKNVQRRFKNGFR 107
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Match: A0A2R5G8N7_9STRA (Ribosomal protein L37 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8N7_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.550e-31 Identity = 62/118 (52.54%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 4 TKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSAPSLAPGPRCDGSGLDTWSCVEAAAPLGRTDPSADNWAAKALRRRTTGSGRMRHLKDMPRRAKNGFREG 357
TKGTQAFGK+HNKSH LCRRCGKSSYH+QK+ CASCGYP+ KMR+ W KALRRRT G+GRMR+LK +PR+AKNGFREG
Sbjct: 2 TKGTQAFGKKHNKSHVLCRRCGKSSYHVQKATCASCGYPSPKMRRY--------------------------------------QWGKKALRRRTEGTGRMRYLKTIPRKAKNGFREG 81 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67647.16329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67647.16329.1 >prot_M-pyrifera_M_contig67647.16329.1 ID=prot_M-pyrifera_M_contig67647.16329.1|Name=mRNA_M-pyrifera_M_contig67647.16329.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp QTKGTQAFGKRHNKSHTLCRRCGKSSYHIQKSQCASCGYPAAKMRKCTSSback to top mRNA from alignment at M-pyrifera_M_contig67647:53..433+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67647.16329.1 ID=mRNA_M-pyrifera_M_contig67647.16329.1|Name=mRNA_M-pyrifera_M_contig67647.16329.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=381bp|location=Sequence derived from alignment at M-pyrifera_M_contig67647:53..433+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67647:53..433+ >mRNA_M-pyrifera_M_contig67647.16329.1 ID=mRNA_M-pyrifera_M_contig67647.16329.1|Name=mRNA_M-pyrifera_M_contig67647.16329.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig67647:53..433+ (Macrocystis pyrifera P11B4 male)back to top |