prot_M-pyrifera_M_contig67635.16328.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67635.16328.1
Unique Nameprot_M-pyrifera_M_contig67635.16328.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length58
Homology
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BLAST of mRNA_M-pyrifera_M_contig67635.16328.1 vs. uniprot
Match: A0A6H5KY69_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY69_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 6.480e-13
Identity = 43/63 (68.25%), Postives = 47/63 (74.60%), Query Frame = 0 
Query:    1 MASYSAAVDFLR-----ATEGGGIDGIDGVAAEDMAAMQALLEEDERSPRTFAMAEDESLDYD 58
            MASY+AAVD  R     A   GG  G+DGVA EDMAAMQAL+EEDE +P  FAMAEDESLDYD
Sbjct:  219 MASYAAAVDNFRSAAAAARAAGG--GLDGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYD 279
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BLAST of mRNA_M-pyrifera_M_contig67635.16328.1 vs. uniprot
Match: D7FY13_ECTSI (Ring finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY13_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.640e-12
Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 0 
Query:    1 MASYSAAVDFLRATEGGGID---GIDGVAAEDMAAMQALLEEDERSPRTFAMAEDESLDYD 58
            MASY+AAVD  R+          G++GVA EDMAAMQAL+EEDE +P  FAMAEDESLDYD
Sbjct:   49 MASYAAAVDNFRSAAXXXXXXXGGMEGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYD 109
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67635.16328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY69_9PHAE6.480e-1368.25RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FY13_ECTSI2.640e-1263.93Ring finger protein n=1 Tax=Ectocarpus siliculosus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67635contigM-pyrifera_M_contig67635:833..1006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67635.16328.1mRNA_M-pyrifera_M_contig67635.16328.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67635 827..1006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67635.16328.1 ID=prot_M-pyrifera_M_contig67635.16328.1|Name=mRNA_M-pyrifera_M_contig67635.16328.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp
MASYSAAVDFLRATEGGGIDGIDGVAAEDMAAMQALLEEDERSPRTFAMA
EDESLDYD
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