prot_M-pyrifera_M_contig67625.16326.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67625.16326.1
Unique Nameprot_M-pyrifera_M_contig67625.16326.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length286
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67625.16326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 203..220
e-value: 0.1
score: 13.1
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 83..100
e-value: 0.0029
score: 15.4
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 6..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67625contigM-pyrifera_M_contig67625:226..1083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67625.16326.1mRNA_M-pyrifera_M_contig67625.16326.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67625 226..1083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67625.16326.1 ID=prot_M-pyrifera_M_contig67625.16326.1|Name=mRNA_M-pyrifera_M_contig67625.16326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
ATTIFRNNTAGFTGGAMRVTNGSSAFWSGNTRFIENSGLSGGAMMISGGS
TASSSGNTTFSANTAGKWGGAVFVSVYSNMILSGETTFSSNVATQGGAVS
VFDNAIVEMSGETKLSRNLAEDGGAMFVQPNSNLSMGEITTFHQNMAVGV
SLSAIPRSGGGALGVVESTVTLSGNTTFSVNTAEALGGAVYGSDYSNIAW
DGETTFSSNVAGQGGAAYAQHRSHLSLDGRTTFHGNLALGTNRSDITPAG
GALTMVDSAVTFGGETMFAENQALGSGGAVFVDSTT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat