mRNA_M-pyrifera_M_contig6762.16322.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6762.16322.1
Unique NamemRNA_M-pyrifera_M_contig6762.16322.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: D8LBF3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF3_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 2.830e-145
Identity = 257/379 (67.81%), Postives = 274/379 (72.30%), Query Frame = 1
Query:   13 DSGAFMEDFGDSLNDEDDDSQTKSGRNAIEGLDTSLQAPNANDFSNARLIEEARMDAERGQSRRNLENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAEEKALQDQLRAERQLREWLEDQKHLRAEERRKTEEK 1149
            D+ AFMED+GDSLND  D  +TK+ RNA E LD SLQAPNANDFSNARLIEE             LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEI EI KD RIEFWL LVKQN+TPPTARI+VNS+TARALAK+MWTNTSLTSLDLS N IDD AG YVARLLK                                          L+  G ++SGI+AL DMFSKN TLTS+NLWRC LGAEAG ALSRGMESN TITFLEVG NGLAMADQHKVKTALE N K FEE Q VRR E +I +KILAEEKA+Q+QLRA               AEERRK EEK
Sbjct:    3 DNDAFMEDYGDSLNDAGDPYETKTTRNAAEALDASLQAPNANDFSNARLIEE-------------LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLNLVKQNATPPTARIDVNSVTARALAKSMWTNTSLTSLDLSRNGIDDAAGTYVARLLKRNTALVNVALGSNQLGVFACRAFGESLCSNSTLKCLSLESNSLTSDGANMSGIQALTDMFSKNSTLTSVNLWRCALGAEAGVALSRGMESNHTITFLEVGLNGLAMADQHKVKTALENNFKRFEECQAVRRQELSIADKILAEEKAMQEQLRAXXXXXXXXXXXXXXXAEERRKAEEK 368          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A835YIK2_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK2_9STRA)

HSP 1 Score: 263 bits (672), Expect = 2.040e-81
Identity = 210/352 (59.66%), Postives = 256/352 (72.73%), Query Frame = 1
Query:  100 EGLDTS-LQAPNANDFSNARLIEEARMDAERGQSRRNLENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAEEKALQDQLRAERQLREWLEDQKHLRAEERRKTEEKR 1152
            E  DTS LQAPNANDFSNARLIEE             LE R  R +GFRDQD++ LQK+LDAEFE EKE +I+   EK+EQA K+AGLQR+R  LE+QL EE  E+ ++  +  WL+LVKQ+ TP TARIEVNSI+ARALAKAMWTNTSLTSLDL+ N +DD AGAY      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+  GE  +G R +    SKN  LTS+NLWRC LG  AG  L+ G+++N+TITFLE+G N LA++D  ++   +++N   ++  Q     +Q  +++IL EEK  QD LR ER+L +WLE Q+ LRAEERR  EE+R
Sbjct:   39 ETFDTSQLQAPNANDFSNARLIEE-------------LEGRRMRPTGFRDQDIIALQKVLDAEFEQEKEHLIRQHNEKKEQAMKEAGLQRRRAQLEKQLTEEKQEVAQNKIVAGWLSLVKQDETPLTARIEVNSISARALAKAMWTNTSLTSLDLARNNLDDFAGAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTNEGEKPAGFRYMVQALSKNAALTSLNLWRCGLGTPAGHDLAAGIQANRTITFLELGNNSLALSDLRQIGARVKDNRCHYDALQQQAMAKQREQDRILQEEKKAQDLLRKERELHDWLEAQRLLRAEERRAEEEER 377          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A6H5JI07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI07_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.960e-57
Identity = 116/147 (78.91%), Postives = 120/147 (81.63%), Query Frame = 1
Query:   13 DSGAFMEDFGDSLNDEDDDSQTKSGRNAIEGLDTSLQAPNANDFSNARLIEEARMDAERGQSRRNLENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLV 453
            D+ AFMED+GDSLND  D  + K+ RNA E LD SLQAPNANDFSNARLIEE             LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEI EI KD RIEFWL LV
Sbjct:    3 DNDAFMEDYGDSLNDAGDPYEPKTTRNAAEALDASLQAPNANDFSNARLIEE-------------LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLHLV 136          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: F0Y577_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y577_AURAN)

HSP 1 Score: 172 bits (437), Expect = 6.090e-44
Identity = 157/311 (50.48%), Postives = 210/311 (67.52%), Query Frame = 1
Query:  208 LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAE---EKALQDQLRAERQLREWLEDQKHLRAEER 1131
            +E R+    GF + D   LQK  D E   E E I + +RE+R+++  +A LQ+KR+ LE+QLREE   +  D +IE WL++V+ + T P+ARI VNS+TARALAKAMW N SLTSLDLS N + D AGA + R+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +    D +G+ ALA   S N +LT +NLWRC LG  AGA L++ +  N +I  L+VG NG+ +AD+ ++   ++ N K   E + +     A + ++  E    +A+ D+ +  R+L EW++ QK LRA ER
Sbjct:   56 MERRHLHPKGFFNDDAKELQKYFDQEHFKELEKIKEERREQRQRSXMKAQLQKKRLQLEKQLREEQDAVANDPQIEAWLSVVRSDQTRPSARIGVNSVTARALAKAMWNNKSLTSLDLSRNDLSDFAGAQIGRMLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNESTDQTGVVALAQALSSNASLTLLNLWRCDLGTTAGAELAKALHLNSSIINLDVGNNGVLVADKRRIADKVDANKK---ETRAIALQNHAFQEQLRKEAAGRQAIADEEQKARELEEWMDAQKDLRAAER 363          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A7S3XPA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPA2_HETAK)

HSP 1 Score: 156 bits (395), Expect = 4.090e-40
Identity = 149/309 (48.22%), Postives = 196/309 (63.43%), Query Frame = 1
Query:  208 LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGG-EDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAEEKALQDQLRAERQLREWLEDQKHLRAEER 1131
            LE R  +  GF   D   LQK  D E E      +K + E++E+ A QAGL R++ ++E+QL+EE+  I++D R E WL LV+ ++TPP AR+E+ S+ AR LAKA+W N SL SLDLS N +DD AGA+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+  G  + +G    ADM   N TLTS+NL+RC LG EAG  L  G+E N ++ FL+VG N    +   ++   ++EN     + ++  +      +K  AE        + ER  ++WLE+QK  RAEER
Sbjct:   63 LEMRGEKPKGFFTDDAKVLQKYFDVEHEEYLAKQMKERAEQQEKLAAQAGLIRRKRLVEKQLKEELLAIQRDRRAEHWLALVRGDATPPQARVELGSVAARCLAKALWGNGSLVSLDLSRNGLDDKAGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTESGLAEKTGAPEFADMLKHNNTLTSLNLFRCHLGPEAGTELLGGLEQNASLVFLDVGGNHFLQSHDARINGKIQENQSLRADLKSQAKQAAEKRSKEEAEXXXXXXXXQKERDTKQWLEEQKQKRAEER 371          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A7R9VZE3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZE3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.470e-35
Identity = 90/239 (37.66%), Postives = 130/239 (54.39%), Query Frame = 1
Query:  208 LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNG 924
            LE R  +  GF   D   LQ+  D E EL  E+  + +RE RE  AK+A  QR+R+++E ++REE  EI +D R++ WL L ++   PP +RIEVN+I+AR+LAKA+ T++S+  LD+S   + D AGAY+ R L+                                          L+    DISGI A+A+M SKNK L  ++LWRC  GA++G A++  M  N  +T +EVG NG
Sbjct:   62 LEKRGLQARGFFADDAKVLQEKFDEEHELYVEAKRREKREAREADAKRAAEQRRRLLMETEVREEREEIGRDRRMKSWLLLTEEGMAPPHSRIEVNNISARSLAKALLTDSSILCLDVSNLGLSDLAGAYLCRALRSNRTLIKIELGSNKFGPKTCKSLGDALTSNNVVRFVSLESNPLTGEKNDISGIIAIAEMLSKNKALRYLSLWRCGTGADSGKAIADAMAFNDALTCIEVGYNG 300          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A482S097_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S097_9ARCH)

HSP 1 Score: 137 bits (346), Expect = 8.730e-34
Identity = 130/288 (45.14%), Postives = 189/288 (65.62%), Query Frame = 1
Query:  262 LQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAEEKALQDQLRAERQLREWLEDQKHLRAE 1125
            LQ+  + EF+ E E     +RE+  + A+Q GL+++R+ +ER L+EE  E+ ++H+I   + ++K+N    + RI V S++AR+LAKAMW N ++T LDLS N + D AG Y+AR+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++    D+SG+ +LA+    NKT+TS+NLWR  +    G  L+  +E N+T+ F + G N + + D  K+   L+ NL  FE  + VRR  + +  +          Q   E +L++WLE+++  R+E
Sbjct:    2 LQRAFEEEFKSELEQRRAKRREQLRKDAQQRGLRQRRLDMERSLQEEQDELARNHQIGMMIDMIKENMMGTSLRINVTSVSARSLAKAMWINDTITCLDLSSNDLSDHAGCYLARILKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIA-SESDLSGLTSLANALKMNKTITSLNLWRTNIPEAGGNILASALEVNETLLFCDTGHNFIEIGDVKKITDKLDANLAQFEANERVRRRHEEVRGQQRXXXXXXXSQRSKEVELKKWLEERRDHRSE 288          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A7S3ZT07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT07_9STRA)

HSP 1 Score: 134 bits (336), Expect = 8.150e-32
Identity = 134/311 (43.09%), Postives = 183/311 (58.84%), Query Frame = 1
Query:  208 LENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAEE---KALQDQLRAERQLREWLEDQKHLRAEER 1131
             E R     GF + D   LQK+LD EF    E +   +R   ++   +A LQ+KR+ LE+QLREE   I      + WL  +K N T    RIE +SI  RALAKA+W+++S+T LDLS N + D AGA + R+LK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L+    D +G+ ALA     N TLT +N+WRC LG  AGAA++  + +N+T+   +VG  G+   D  ++   +  N +   E +   + E+A  +++  EE   KA+ D     R L  + ++Q+  RA ER
Sbjct:   55 FERRGMHPKGFFNDDARELQKVLDKEFSENLEKLKAEKRAALQRNRMKAKLQKKRLQLEKQLREEQDAIHDSLDAKAWLNTIKNNQTRDACRIECDSIVCRALAKALWSSSSITCLDLSRNGLSDFAGAQLGRMLKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMETNPLTNESTDQTGVVALAKALGSNTTLTRLNMWRCDLGTAAGAAIADALVANETLIDFDVGHGGILELDAQRIADRIAHNKR---ETKAKNKREKAYRDQLAREEAGRKAMADAEEERRLLEVYYQEQRDARALER 362          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A3R7IFG4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IFG4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.660e-29
Identity = 133/304 (43.75%), Postives = 192/304 (63.16%), Query Frame = 1
Query:  199 RRNLENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAEEKALQDQLRAERQLREWLEDQK 1110
            RR + +R  +  GF + D   LQ+  + E   EK+S ++ + +   ++  +  + R+R+  E+++REE+ EI K+ ++E WL L K + TP  A + VNSI ARAL K +    SL SL+LS N +DD  G ++A LLK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+   +D SG+ AL +M +KNKTL ++NLWR  LG+E G  L+  +  N ++  L+VG N +A AD   +   L++N   FEE+Q  +   +  + +   +E+  QD L   ++  EW+E +K
Sbjct:  698 RREMIDRGIQPKGFYNDDAARLQEEFNREHAAEKDSRVQQKVQFAAKSYLRETVHRRRLEREKEVREEVEEIAKNPQLEVWLGLAKADETPKHADLRVNSIGARALCKTLAFTHSLRSLNLSRNALDDATGKWLALLLKRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTDDEKDFSGVAALGNMLTKNKTLRTLNLWRTRLGSEGGKQLALYIARNSSLVCLDVGNNRIATADAVSLDVQLKKNRVLFEEQQLQQLKYREAQWRAADKERERQDNLAKRQEDEEWMEKRK 1001          
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Match: A0A485L7F3_9STRA (Aste57867_16606 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7F3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.190e-28
Identity = 127/269 (47.21%), Postives = 169/269 (62.83%), Query Frame = 1
Query:  199 RRNLENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTLVKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYVARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRGGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGA------ALSRGMESNQTITFLEVGQNGLAMADQHKVKTALEENLKTFE 987
            RR L +R  +  GF + D + LQ+  D E   EKES +K + +   +   +  ++RKR  LE +L+EEI E+ K+ ++E WL LVK N+TP  A + VNSI  RALAK +  N SL +L+LS N ++            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L+    D +G+ A+  M +KN TLTS+NLWR  LG E G       AL++GM+ N+T+  L++G N + + D   +  AL ENL  +E
Sbjct:   52 RRELIDRGIQPKGFFNDDALRLQEEFDREHVAEKESRMKQRIQTAAKTYLRETIKRKRQQLETELKEEIDELAKNPKLEVWLDLVKSNTTPIEALLRVNSIATRALAKVLPFNLSLRALNLSGNHLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNPLTSDETDFTGVTAIGAMLAKNTTLTSLNLWRTRLGMEGGKVMEMMWALAKGMQQNETMLCLDIGNNKVGLGDATAISKALAENLARYE 320          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6762.16322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LBF3_ECTSI2.830e-14567.81Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835YIK2_9STRA2.040e-8159.66Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A6H5JI07_9PHAE1.960e-5778.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y577_AURAN6.090e-4450.48F-box domain-containing protein n=1 Tax=Aureococcu... [more]
A0A7S3XPA2_HETAK4.090e-4048.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9VZE3_9STRA3.470e-3537.66Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A482S097_9ARCH8.730e-3445.14Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3ZT07_9STRA8.150e-3243.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3R7IFG4_9STRA2.660e-2943.75Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A485L7F3_9STRA3.190e-2847.21Aste57867_16606 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6762contigM-pyrifera_M_contig6762:4548..7232 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score433.0
Seed ortholog evalue1.5e-118
Seed eggNOG ortholog2880.D8LBF3
KEGG koko:K17576
Hectar predicted targeting categoryother localisation
EggNOG free text desc.interleukin-8 biosynthetic process
EggNOG OGsKOG4308@1,KOG4308@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Exons3
Model size1152
Cds size1152
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6762.16322.1prot_M-pyrifera_M_contig6762.16322.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6762 4548..7232 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816566.7596362-CDS-M-pyrifera_M_contig6762:4547..52491622816566.7596362-CDS-M-pyrifera_M_contig6762:4547..5249Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6762 4548..5249 -
1692278050.7875655-CDS-M-pyrifera_M_contig6762:4547..52491692278050.7875655-CDS-M-pyrifera_M_contig6762:4547..5249Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6762 4548..5249 -
1622816566.7715082-CDS-M-pyrifera_M_contig6762:6584..68271622816566.7715082-CDS-M-pyrifera_M_contig6762:6584..6827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6762 6585..6827 -
1692278050.8056116-CDS-M-pyrifera_M_contig6762:6584..68271692278050.8056116-CDS-M-pyrifera_M_contig6762:6584..6827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6762 6585..6827 -
1622816566.7848606-CDS-M-pyrifera_M_contig6762:7025..72321622816566.7848606-CDS-M-pyrifera_M_contig6762:7025..7232Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6762 7026..7232 -
1692278050.8158033-CDS-M-pyrifera_M_contig6762:7025..72321692278050.8158033-CDS-M-pyrifera_M_contig6762:7025..7232Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6762 7026..7232 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6762.16322.1

>prot_M-pyrifera_M_contig6762.16322.1 ID=prot_M-pyrifera_M_contig6762.16322.1|Name=mRNA_M-pyrifera_M_contig6762.16322.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=384bp
MDTGDSGAFMEDFGDSLNDEDDDSQTKSGRNAIEGLDTSLQAPNANDFSN
ARLIEEARMDAERGQSRRNLENRNSRVSGFRDQDVVTLQKILDAEFELEK
ESIIKHQREKREQAAKQAGLQRKRMMLERQLREEIFEIEKDHRIEFWLTL
VKQNSTPPTARIEVNSITARALAKAMWTNTSLTSLDLSCNQIDDPAGAYV
ARLLKRNTALVNVSLGSNQLGARACRAFGESLCSNTTLKCISLEANSLSR
GGEDISGIRALADMFSKNKTLTSINLWRCTLGAEAGAALSRGMESNQTIT
FLEVGQNGLAMADQHKVKTALEENLKTFEERQTVRRHEQAIENKILAEEK
ALQDQLRAERQLREWLEDQKHLRAEERRKTEEKR
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mRNA from alignment at M-pyrifera_M_contig6762:4548..7232-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6762.16322.1 ID=mRNA_M-pyrifera_M_contig6762.16322.1|Name=mRNA_M-pyrifera_M_contig6762.16322.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2685bp|location=Sequence derived from alignment at M-pyrifera_M_contig6762:4548..7232- (Macrocystis pyrifera P11B4 male)
ATGGACACAGGCGACAGCGGCGCGTTCATGGAAGATTTTGGAGACTCGCT GAATGATGAAGATGACGACAGTCAGACGAAGAGTGGGCGCAACGCGATAG AGGGACTGGATACGTCGTTGCAAGCGCCCAATGCAAATGACTTTTCTAAT GCGCGCCTAATCGAAGAGGCAAGGATGGATGCAGAACGAGGACAAAGTCG TCGTAATGTATTTTACGGGTCCGGTATCTTACATGCATCAACGCCAAACG CCCCGTTACGGCAACGAGCAAACGTTTATCGTGTTAGTCTTGCATGTTAG TCTTGCCGTTTGGGTTTCCTCGGAGGCACCGCAGGCAAAATACGAATTAC CCAATCTTTGTAAACGTTCTCCCCATTCTGCCGTTCATTATGCCTGATTA TGCAGCTCGAGAACAGGAATTCGCGTGTCAGCGGATTCCGAGATCAAGAC GTGGTCACACTGCAAAAAATTTTGGACGCAGAATTTGAATTGGAGAAGGA GAGCATAATCAAGCACCAGCGAGAGAAGAGAGAGCAAGCAGCCAAGCAAG CCGGCTTGCAGAGGAAACGCATGATGCTGGAGAGACAACTGAGAGAAGAG ATATTTGAAATCGAAAAAGATCACAGAATCGAATTCTGGTTGACGCTGGT GAGTGCTCGTTGACATGTGCTTTTGGTTGCGATGATGGTGACGGCACACA GAAGAATGCCACAGGTATGGCCCATGGTGTGTACCAGGTACCAGGAACGT AAGTATGTACTAGCCCCCCCCTTGGGACCCCGAGGTAGCGACCAAAACAA ATTGACTCTAGTGGTATCAGTCGTCTACGAGCAGCGTGAGCTTCCAGCAG TACGAGTAGGACCATGTTGCGCCCCAGGCTGGGCCCCACGACTCCTTGCA TCGCAGCTCGAACACCAACCATTGTATCATCCCCCAATCATGCAGTAGCC GCTACTGTAATCATACGGCAGTAGTCACTTTTGTAGTGTCAATTTTCCCC TCTAAAGGTCGAAGAGGGTTTTTACGTTCCCTGTGTCTGGATGCGAGGTT GGATAGGTAAGGGAATCTCAAACAAAATGGTGTACTATCTGCTCGCTCAT ACAGTACATAATAATTTCCGATGTTTTTTTGCGGCGGCCGAATGCACATC TACAAGTGCAGTTAGCTATCTGGTACCAGTAGCGTATAATATCGATCTCC ATCCGCGGTTAGGCGTTCAGTTTAGTTGTTATTTTGTGCAGAGGGTCAAC AGATACATTCTAAGACGCGAACTGTTGCATGTATGTGTATCCGCTCAAGC CACGTGGATCACGAATCTGTACTTAGTTTTGCTTGTGAACTTGAGACATT GAGAATTTAGGAGAGGAAATCTGGGGGAAAACGGCCGATTTGGGCGAAAA ACGCCCCCCGCGGATGTTTGGCAAATATTCCCTTACCTTCCGAACCGTGT CATTTTTCAGGGTTGTGCATGTAACAGGGGTATCAGCGTTTGTTTGCGAA GTCAAAAGTGAAAACAAATATGTTCCGCATCAGCTTCATCTCTCCACAAA ACAGTTTTTCGACCCACCGGAGATAGAAATTTCTTGAATCCCGGCGCACT TCACTTTTGCTCTGATCTCTACTTCGTAAAGTTCTACCCCCACTAAAAAG CGGCCACGCCGAATCGATTGGCGAGAGGTGCAACGAGGAGTGAATTCGGG AATGCGGCGATTCATTTTTTCAATGCAATCCGAATTTCGTTCGTTTTTTT TGTATCTTTTTTTCAACGACGGTTTTGGCGGTTTTAGAACGATCCACGGA ACATTTTTTTGCTATTGTTTTTTTCAGGTGGGCCGAGCGATTTGAACAAA AATCTCACCGTAGATGACACCCATAGCACTGATTTTGACTATCGATAAGA CTAGCTTATGCCCCCCAGATTTTGTTTTCGTGTGGGGAACTTGTTAACGC GCCTGCTCCGTTTGATATGTATCATACGCACAGGTTAAGCAAAATTCCAC ACCGCCAACCGCTCGGATTGAGGTCAACTCCATCACGGCCCGTGCTCTTG CTAAAGCTATGTGGACGAATACATCACTAACCAGCCTAGACTTATCGTGC AACCAAATTGACGATCCAGCGGGCGCGTACGTTGCACGCTTGCTCAAGCG CAACACAGCACTGGTGAACGTTTCGCTTGGGTCGAACCAACTTGGAGCAC GTGCGTGTCGAGCTTTCGGCGAGTCGTTGTGCTCAAACACAACGCTGAAG TGTATAAGTCTTGAAGCTAACTCACTATCACGCGGTGGTGAAGATATTTC GGGAATACGAGCTCTCGCCGATATGTTCAGCAAGAACAAAACGCTGACAT CGATTAATCTTTGGAGATGTACACTGGGTGCAGAAGCAGGGGCGGCATTA TCGCGGGGGATGGAATCAAATCAGACGATAACCTTCCTTGAAGTCGGACA AAACGGACTCGCAATGGCAGACCAGCACAAGGTCAAAACTGCACTTGAGG AGAACCTCAAAACGTTTGAAGAGCGCCAAACGGTACGACGCCATGAGCAA GCAATTGAGAACAAGATCTTGGCGGAGGAGAAAGCCTTGCAGGACCAGCT CAGAGCAGAGAGGCAATTACGCGAATGGCTTGAGGATCAAAAGCACCTAC GTGCCGAGGAGCGTCGAAAAACAGAGGAGAAAAGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig6762:4548..7232-

>mRNA_M-pyrifera_M_contig6762.16322.1 ID=mRNA_M-pyrifera_M_contig6762.16322.1|Name=mRNA_M-pyrifera_M_contig6762.16322.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2304bp|location=Sequence derived from alignment at M-pyrifera_M_contig6762:4548..7232- (Macrocystis pyrifera P11B4 male)
ATGGACACAGGCGACAGCGGCGCGTTCATGGAAGATTTTGGAGACTCGCT
GAATGATGAAGATGACGACAGTCAGACGAAGAGTGGGCGCAACGCGATAG
AGGGACTGGATACGTCGTTGCAAGCGCCCAATGCAAATGACTTTTCTAAT
GCGCGCCTAATCGAAGAGGCAAGGATGGATGCAGAACGAGGACAAAGTCG
TCGTAATATGGACACAGGCGACAGCGGCGCGTTCATGGAAGATTTTGGAG
ACTCGCTGAATGATGAAGATGACGACAGTCAGACGAAGAGTGGGCGCAAC
GCGATAGAGGGACTGGATACGTCGTTGCAAGCGCCCAATGCAAATGACTT
TTCTAATGCGCGCCTAATCGAAGAGGCAAGGATGGATGCAGAACGAGGAC
AAAGTCGTCGTAATCTCGAGAACAGGAATTCGCGTGTCAGCGGATTCCGA
GATCAAGACGTGGTCACACTGCAAAAAATTTTGGACGCAGAATTTGAATT
GGAGAAGGAGAGCATAATCAAGCACCAGCGAGAGAAGAGAGAGCAAGCAG
CCAAGCAAGCCGGCTTGCAGAGGAAACGCATGATGCTGGAGAGACAACTG
AGAGAAGAGATATTTGAAATCGAAAAAGATCACAGAATCGAATTCTGGTT
GACGCTGCTCGAGAACAGGAATTCGCGTGTCAGCGGATTCCGAGATCAAG
ACGTGGTCACACTGCAAAAAATTTTGGACGCAGAATTTGAATTGGAGAAG
GAGAGCATAATCAAGCACCAGCGAGAGAAGAGAGAGCAAGCAGCCAAGCA
AGCCGGCTTGCAGAGGAAACGCATGATGCTGGAGAGACAACTGAGAGAAG
AGATATTTGAAATCGAAAAAGATCACAGAATCGAATTCTGGTTGACGCTG
GTTAAGCAAAATTCCACACCGCCAACCGCTCGGATTGAGGTCAACTCCAT
CACGGCCCGTGCTCTTGCTAAAGCTATGTGGACGAATACATCACTAACCA
GCCTAGACTTATCGTGCAACCAAATTGACGATCCAGCGGGCGCGTACGTT
GCACGCTTGCTCAAGCGCAACACAGCACTGGTGAACGTTTCGCTTGGGTC
GAACCAACTTGGAGCACGTGCGTGTCGAGCTTTCGGCGAGTCGTTGTGCT
CAAACACAACGCTGAAGTGTATAAGTCTTGAAGCTAACTCACTATCACGC
GGTGGTGAAGATATTTCGGGAATACGAGCTCTCGCCGATATGTTCAGCAA
GAACAAAACGCTGACATCGATTAATCTTTGGAGATGTACACTGGGTGCAG
AAGCAGGGGCGGCATTATCGCGGGGGATGGAATCAAATCAGACGATAACC
TTCCTTGAAGTCGGACAAAACGGACTCGCAATGGCAGACCAGCACAAGGT
CAAAACTGCACTTGAGGAGAACCTCAAAACGTTTGAAGAGCGCCAAACGG
TACGACGCCATGAGCAAGCAATTGAGAACAAGATCTTGGCGGAGGAGAAA
GCCTTGCAGGACCAGCTCAGAGCAGAGAGGCAATTACGCGAATGGCTTGA
GGATCAAAAGCACCTACGTGCCGAGGAGCGTCGAAAAACAGAGGAGAAAA
GGGTTAAGCAAAATTCCACACCGCCAACCGCTCGGATTGAGGTCAACTCC
ATCACGGCCCGTGCTCTTGCTAAAGCTATGTGGACGAATACATCACTAAC
CAGCCTAGACTTATCGTGCAACCAAATTGACGATCCAGCGGGCGCGTACG
TTGCACGCTTGCTCAAGCGCAACACAGCACTGGTGAACGTTTCGCTTGGG
TCGAACCAACTTGGAGCACGTGCGTGTCGAGCTTTCGGCGAGTCGTTGTG
CTCAAACACAACGCTGAAGTGTATAAGTCTTGAAGCTAACTCACTATCAC
GCGGTGGTGAAGATATTTCGGGAATACGAGCTCTCGCCGATATGTTCAGC
AAGAACAAAACGCTGACATCGATTAATCTTTGGAGATGTACACTGGGTGC
AGAAGCAGGGGCGGCATTATCGCGGGGGATGGAATCAAATCAGACGATAA
CCTTCCTTGAAGTCGGACAAAACGGACTCGCAATGGCAGACCAGCACAAG
GTCAAAACTGCACTTGAGGAGAACCTCAAAACGTTTGAAGAGCGCCAAAC
GGTACGACGCCATGAGCAAGCAATTGAGAACAAGATCTTGGCGGAGGAGA
AAGCCTTGCAGGACCAGCTCAGAGCAGAGAGGCAATTACGCGAATGGCTT
GAGGATCAAAAGCACCTACGTGCCGAGGAGCGTCGAAAAACAGAGGAGAA
AAGG
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