prot_M-pyrifera_M_contig67330.16271.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67330.16271.1
Unique Nameprot_M-pyrifera_M_contig67330.16271.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length108
Homology
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BLAST of mRNA_M-pyrifera_M_contig67330.16271.1 vs. uniprot
Match: A0A1Y2F7J1_PROLT (Nuclear protein Es2-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F7J1_PROLT)

HSP 1 Score: 50.1 bits (118), Expect = 8.820e-5
Identity = 30/111 (27.03%), Postives = 55/111 (49.55%), Query Frame = 0 
Query:    3 VVEDDLFLECLQHIVQRDFFPGVEGSGRGEV------GGVAEVLAGFRLPDADPVSDASLAAGGRVAEEVVRRGVSLDLFLSKFCSEDDFEAQQLLRSDVREHRERHWWAY 107
            V+++D++++ L HI++RDFFPG+E     ++      G +       R P          A G   +++     +SLD F +++ SED+   Q++L       RE++ W Y
Sbjct:   30 VLDEDIYVDSLSHIIKRDFFPGLETHSSSQIEDSRHSGSIRPSSTRMRTPHFAQEVTTDEAPGN--SDKRPASSLSLDRFQARYTSEDNASFQEILDEGNLARREKYSWLY 138
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67330.16271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1Y2F7J1_PROLT8.820e-527.03Nuclear protein Es2-domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019148Nuclear protein DGCR14/ESS-2PFAMPF09751Es2coord: 64..108
e-value: 7.9E-5
score: 22.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67330contigM-pyrifera_M_contig67330:281..604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67330.16271.1mRNA_M-pyrifera_M_contig67330.16271.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67330 281..604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67330.16271.1 ID=prot_M-pyrifera_M_contig67330.16271.1|Name=mRNA_M-pyrifera_M_contig67330.16271.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
RIVVEDDLFLECLQHIVQRDFFPGVEGSGRGEVGGVAEVLAGFRLPDADP
VSDASLAAGGRVAEEVVRRGVSLDLFLSKFCSEDDFEAQQLLRSDVREHR
ERHWWAYE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019148Nuclear_protein_DGCR14_ESS-2