mRNA_M-pyrifera_M_contig6731.16268.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6731.16268.1
Unique NamemRNA_M-pyrifera_M_contig6731.16268.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig6731.16268.1 vs. uniprot
Match: D8LJC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC7_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.130e-44
Identity = 117/206 (56.80%), Postives = 133/206 (64.56%), Query Frame = 1
Query:    1 RSPQVVAVVTSRDCRTVQAALAQITRQ-CLAVGGTASRRPLFMDSLGEWY--------TSLFE-EGEEEWGEXXXXXXXXXXXGVEXXXXXXXXXXXXXXXVVLLEDVEGIDKQVLRDLMDMLAQPPRSGNAVANRRGPTAPRIG-------RGFPLAVVAIASAGVGFPLDRLSPSATRQLFLENFSFPTSRDCADVLYCKLFVQ 567
            R PQVVAV+ ++DCRTV+AA  QI RQ C A GG  SRRPLFMD+L EWY        TS +E  GEEE GE           G      XXXXXXXX   VVLLEDVEG DKQVLRDL+++LAQPP     V  + G T  R+        R  PLA+VAIASA VGFP+DRLSPSA RQL  ENF FP+S +C D+LY KLFVQ
Sbjct:  160 RRPQVVAVLRAQDCRTVEAAFKQILRQKCHARGGARSRRPLFMDALEEWYGSCAISSSTSTWEPSGEEEGGEDGTAVDGARAPG-RRVAAXXXXXXXXGPVVVLLEDVEGFDKQVLRDLLNVLAQPPCKSRRVQRKTGGTVNRLXXXXXXXXRTLPLALVAIASARVGFPMDRLSPSAVRQLSPENFYFPSSVECIDLLYEKLFVQ 364          
BLAST of mRNA_M-pyrifera_M_contig6731.16268.1 vs. uniprot
Match: A0A6H5JMQ2_9PHAE (ORC3_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ2_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 8.590e-42
Identity = 125/206 (60.68%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    1 RSPQVVAVVTSRDCRTVQAALAQITRQCLAVGGTASRRPLFMDSLGEWY----------TSLFEEGEEEWGEXXXXXXXXXXXGVEXXXXXXXXXXXXXXXVVLLEDVEGIDKQVLRDLMDMLAQPPRSGNAVANRRGPTAPRIGRG-------FPLAVVAIASAGVGFPLDRLSPSATRQLFLENFSFPTSRDCADVLYCKLFVQ 567
            R PQVVAV+ ++DC TV+AA  QI RQC A GGT SRRPLFMD+L EWY          TS  +   E    XXXXXXXXXXX   XXXXXXXXXXXXX  VVLLEDVEG DKQVLRDL+++LAQPP     V  R G T  R            P+A+VAIASA VGFP+DRLSPSA RQL  ENF FP+S +C D+LY KLFVQ
Sbjct:  160 RRPQVVAVLRAQDCSTVEAAFKQILRQCHARGGTRSRRPLFMDALEEWYSSCAIPSSTSTSTSKCSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVVLLEDVEGFDKQVLRDLLNVLAQPPCKSRRVQGRTGGTVNRXXXXXXXXXXTLPMALVAIASARVGFPMDRLSPSAVRQLSPENFHFPSSVECVDLLYEKLFVQ 365          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6731.16268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJC7_ECTSI1.130e-4456.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMQ2_9PHAE8.590e-4260.68ORC3_N domain-containing protein n=1 Tax=Ectocarpu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6731contigM-pyrifera_M_contig6731:722..8373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size567
Cds size567
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6731.16268.1prot_M-pyrifera_M_contig6731.16268.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6731 722..8373 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816563.4179158-CDS-M-pyrifera_M_contig6731:721..8471622816563.4179158-CDS-M-pyrifera_M_contig6731:721..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 722..847 -
1692278048.7651455-CDS-M-pyrifera_M_contig6731:721..8471692278048.7651455-CDS-M-pyrifera_M_contig6731:721..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 722..847 -
1622816563.430152-CDS-M-pyrifera_M_contig6731:3466..35951622816563.430152-CDS-M-pyrifera_M_contig6731:3466..3595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 3467..3595 -
1692278048.778098-CDS-M-pyrifera_M_contig6731:3466..35951692278048.778098-CDS-M-pyrifera_M_contig6731:3466..3595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 3467..3595 -
1622816563.4420037-CDS-M-pyrifera_M_contig6731:4635..47291622816563.4420037-CDS-M-pyrifera_M_contig6731:4635..4729Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 4636..4729 -
1692278048.787912-CDS-M-pyrifera_M_contig6731:4635..47291692278048.787912-CDS-M-pyrifera_M_contig6731:4635..4729Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 4636..4729 -
1622816563.4550836-CDS-M-pyrifera_M_contig6731:4815..48741622816563.4550836-CDS-M-pyrifera_M_contig6731:4815..4874Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 4816..4874 -
1692278048.801798-CDS-M-pyrifera_M_contig6731:4815..48741692278048.801798-CDS-M-pyrifera_M_contig6731:4815..4874Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 4816..4874 -
1622816563.4693449-CDS-M-pyrifera_M_contig6731:5442..55201622816563.4693449-CDS-M-pyrifera_M_contig6731:5442..5520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 5443..5520 -
1692278048.8104498-CDS-M-pyrifera_M_contig6731:5442..55201692278048.8104498-CDS-M-pyrifera_M_contig6731:5442..5520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 5443..5520 -
1622816563.4827216-CDS-M-pyrifera_M_contig6731:8292..83731622816563.4827216-CDS-M-pyrifera_M_contig6731:8292..8373Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 8293..8373 -
1692278048.8188844-CDS-M-pyrifera_M_contig6731:8292..83731692278048.8188844-CDS-M-pyrifera_M_contig6731:8292..8373Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6731 8293..8373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6731.16268.1

>prot_M-pyrifera_M_contig6731.16268.1 ID=prot_M-pyrifera_M_contig6731.16268.1|Name=mRNA_M-pyrifera_M_contig6731.16268.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp
RSPQVVAVVTSRDCRTVQAALAQITRQCLAVGGTASRRPLFMDSLGEWYT
SLFEEGEEEWGEDEEEEGEEDGEGVEEARRRKRRKRRRPAVVVLLEDVEG
IDKQVLRDLMDMLAQPPRSGNAVANRRGPTAPRIGRGFPLAVVAIASAGV
GFPLDRLSPSATRQLFLENFSFPTSRDCADVLYCKLFVQ
back to top

mRNA from alignment at M-pyrifera_M_contig6731:722..8373-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6731.16268.1 ID=mRNA_M-pyrifera_M_contig6731.16268.1|Name=mRNA_M-pyrifera_M_contig6731.16268.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7652bp|location=Sequence derived from alignment at M-pyrifera_M_contig6731:722..8373- (Macrocystis pyrifera P11B4 male)
CGCAGTCCTCAGGTGGTAGCCGTGGTAACATCCCGAGACTGCAGGACGGT CCAAGCCGCTTTGGCCCAGATCACTCGTCAGGTGAGAGGGGACGGCAGCA CGATGCATGGTGCATGATTCATGCTGCTATGGTATGTATCCAGCTAATGT CTACGATGCTCCTAACTTGAGGGGCTTTTCCAGCAGAAATTCGTCCGTTT CAGGTTTACACTGTTTCAGTTAGGATGTGTATCTGACTGTTTTTGTATTT TTTTATTTGCGTGTATTTTCCCCTCGAAGTATTCTTCCGCTCCAGTTTTT CGGAGCCTGTCCTGTGACCAGGAACTCAATGTTTCGGACATGAGTTTATG TGACTACAACGCCGTACGATTAGCAAGTCACCCAGCGAAACGACTACGAG AAAAAGAAGCGGTTGCAACCCGATGGACAAAACACCATGGCCTAGGTATC ATAACAAACCAATTAATGGTATTCCCATTATAAGGCATGCCTTATTGGCC CAGGCATCATAACGCACTAATTAGTATCGTACTGTATTAATAGTGATGAT ACATAGGTATCGTGTGTAAACTTGAACAAAGGGGGGTATACATGGTTTTG GGTCCATCGTGAGTTCTGATTTATGTATCCCTCTGGGCGGAAATATTGGT ATCGTTTACACATTAATATCAAGGCCAATCGGTCCTTGTATTCCCGCCCA TAGTGGCATTGTACTATATTTAGTATAGTATAGTATAGTATAGTATAGTA TAGCATAGCATAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTA TAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTAATATGCCCCC CCTCGTACTACTGTAGAGTGGTAGGCCGGTATGATAGTCTGTCTATGTCT GTGTCGCCATAATAGTTTCGTTATTCCCCACGTCATCTAGTAAACCCAGT GAGCGCAGTGAGCGCACCGCACGAGCCTGCTGCGGTTGCGAGGCGCTTGC GAGTTTTTTGTGGACACAAGCTGTTGTGGGGAAACATACAGTAGTAATCG GAACCTACAGCTGTAGTAATATGTACCTGGCATGGTGTACCGTATTAATA TGTGTGCGTATGGGGGGATACTTTTTTTCTGTACCCACCCCCGCAATACG AGACAGATACTGGAGATATATGCAAGGCGCTTCGCTCCGCGGGCGGCCTA CGCCGCCCGCTACGCTCGCTCAGGAAGGGAAGTACATCAAAATATGCGAA GCGGACAGAGGTCCATGATTGAATATAGGTTTTTCATGATTGATCGTAGT TGCAAACTGGTGACTTGATGATTCCAAGAGTCCCGCCGCCATGCTTCATT CATTCAGGAGAAAACTGCGCGGACGCCACATACGCTTCGCGTCGCGAGCG GTTTTCCGCTACGCTCGCTCACATGCCGTACGTACGTACATACCCCAGGT AGGGTACTTATTTTCTTCTTTTGATATGCTCCATGTCTGTACTCGTATGT ACGAAAGAGAAAGCACAGCAGGGCACAGCAGCACCGCAAAAACAATGAAA ATGAAACCGAAAATGTGGGAAAGACAAAAAATCCCCGTCCCCTCTGTAAT AATGTCCTGCCTGATTGGAACACCTTACACCGGTCAAAAATAAATAAAGA AGAAAATCGAACAGCAGAGCTTCTCTCTCAGCCCCGTACGCCGCCCGCCC CTCTCGCGATCATCTTGCCACCGATTCGGTCCGGGTAAAGCTGTCCTCAC TCTCTGCCACAGTGAGCCCCGTCGCCCGCCTCGCGTGAAGCCTGGTGCTC ACCGTGGACCTCCTTCGCCAGCTCGACAATGTTGGTGCTCAGATTGCGTA GCTCTCTCTGTGAACTTCCGCTTGGTCGCAAAAATAAGCACCGATTGAAT TTTATTTTGCATATCAAAATCGCCCTTATATACTCGTACATAGTGAAACC GGAACCACACCAGGAAGCCAGTCAGAGCCCATTCATGCTTCCGTCGTGTC TCGAGGCACACGCGACGCCTAGCCACGAAACGGCGACCGCACTCCTTGCA ACCCCCCCTCTACCCGCCACCACCCGCTGACACCCGCGCCCGCGGTGCCG TGCTTGGAGTAGACGCACGCACTAACACACACGAAACGAAAGAAGAAAGG GAAACATAACTGAAAGTGCTAAGAAAAATGGAGAAAACAAAGAACCGCTG GAAAGGTCCGGCGAGTAATCAAAGGAGGCGATGTTCGTGTGGGAGCTCTG AGAGGCCGGGGATGTACCAACCGAGCTCGCTCAGAGAGGGAGATATCTGT AAGTAGTTGTATATCCTTTGAGGACTTCAGTCCCGTTTTGGGGACACACC GGTTATAATTTTGACTGATTTGTCCCTAGATCGGGAATGCAGTTCTAATG AGGTCAATATGTCATACGACAACAGCAGCAACGACAACAACAGCAACAAC AGCAACACCAGCAACCTACAGCAACCAATAGCAATAAATAGCAAATATCA ACATCATATAACGAGAAACAAGAACGACCTACGCACGAACTTCCTGCGCC TAAAAACAACCCCATCGACAAACTATTAAATACAACCAACAATCTATAAC AAAACTCCGACACGAAAAAACAGTAAGAGCAAATACGAGGTAACAAACAA GAAACAGCAACAACAAACTTACAACAAGGAACAACAAGAAACAACACCAG CGGCAGCGACGACAACAATAACTTGCCTCCTGCCCAAAAAAACAATATAA ATCGCGCATTTTTATTCACATCTCCTCCGCGTCTATCTACATACGAAAAA TTTAAGTCAACCCGTTTGTCTGTCCTTTCCGTCCGTCCGTGTCGCAATAT TAGTGCCTTGCCGTGGGCGGGACAGCTTCGCGCCGTCCCCTGTTTATGGA CAGCCTCGGAGAGTGGTACACCTCGCTCTTCGTTCCGCCCCCGACAAGGC CTCGAGCCGCCTCGCCGACCTTACCCTCAACTTCAACGGTTGCTTCAACG TTCCCTTCGAAGTCCTCTCGAAAATCAGTGTCAAGTTCAGCCATGACTGT TGCCTCACCTGCAACTTCAGATTCAACTTCAACGATGGCTTCAACGTCCA CGCCGAGTTACTCTCGAAAGTCAGTGTCAAGTTCAACCATGGCTTTTGCC TCACCTTCAAGTTCAAGTTCAACTTCACGTCCACCGGTGCCTTCAACTTC CGCTCCAACTTCAAGCATGGCCTCTTCTTCAAGTTCAGCGTCAACGGTAG CTTCACATGCCGCTCGAAGTTCAACAGTGACTTTCGCCTCGCCTTCGAGT TCGACGGCTTTTTCTGCCTCGTTTTCAAATCCAGGTTCGAATTCAAATGC ACCTCCTCGAACTCCAACAGGAAGTTTAAGTTCAACATCAGTGGCGGCGG CCGCGGTCGCCACGGGGCCTGCGTCCGGAAAAGGAAAAGAAAGAGAAGGA CGATATGATAAACAAGGACAAGGAGGAGCGGGAGCAAGAGGACGGGGAGG AGGAGGGGGAGGAGGAATGGGGGGAGGACGAGGAGGAGGAGGGGGAGGAA GATGGAGAGTAGGAGGAGAAGCAGGAGGTGGAGGAATTGGGAGAGCAGGA GCGGGAGGAGATGTGGGAGATGGACAAGGAGAGAGGGGGGTCAGGGGTGT GGAGGAGGCAAGGAGGAGAAAAAGGAGGAAGCGGAGGCGCCCCGCCGTGG TGGTGCTCCTCGAAGACGTCGAGGGAATAGACAAACAGGTGATGTTCTCA CTGTCTGTTTCGTGTCCGCCTTCGATTGTTGTTGTTGTTGTTGTTGTTGC TACTGTTGCTGTTGCTGTGTTCTTGCTGTAGTTGGTGTTGTTGTTGTTGG TGGTGTTATTCTGGCCGATTTTGTTTTTGGTGGGGGTGGTGGCGTTGGTG ATGGTGATGGTGATGGTGATGGTGCTGTTAGTGGTTCTGTCTTTGGTGTA GTGGTCTTCGTGGTGGTGGTGGTGGTGGTATTGACGACGACGGTGTTGAT GGGAGTCGTTCTGGTGTTGGTGATGATGATGTTGGTGTTGGCGGCGATCG CGATGGTGCTGTTGTTGAAGGTGGTGTTGTCGTTTGACGGTCTTGTTGAT GGTGTGTGGTGATGGTTTTGGTGGTGTTATGGTGGCAGCTTTCGCGGCGT TGGCGGTTGTGCGGGTTGTGCTTGTGATGGTGCTGGGTGACCGTGGTGGT GCTGGTGCTGGAGTTGTCTGTGGTGGTCTTGATGGTGTTTGGGCTGATCT TGACGGTGAGAGTGTGCGTGGTGGTGTTGGTGTGCGTGCTGTTGTTGTCG GTGGTTGTGGTGGTGGTGGTTTAGGTGCTGGCGTCGTTGATGGGTGAGCT GATTTTGCTAGCGGTAGCGGGGGTAATGTCCTTGGTTCGATAGTAGTACT AGTGGTGGTGGTGGTGGAGTGTGGTTTTGTTGGTGTTGGTGTTCGCCGTA TTGATGTTGGCGTTGGTCGTGGTGGTGGTGGATGTGTCCGTGTTGGTGTT GAGGATAGTGTGTGCGCCGGTGTTGGTGCTGTTGGTTCTGGTTGTAGCGT TGGCTGCTGTCCTGCCGACTCGATTGTGTGGGCGTGTTCAGTTTTAACGA TTTACATTTCTTTACCTAGAGAGGAGCGCTGGAGGGGGCCGGAAGGACTT GTGCCTCCTTGGGTTGCTTTTCGTTTCATATGTTGTCGCTCTCTCTCACA ATACACTCATGTTCTCCGTCTCTCCTCTTTACTCTCTCTCTCCCTCTTTC TCTGACCTTCTCTCTGGAATGCATTCAGGTACTAAGGGACCTCATGGACA TGTTGGCCCAGCCCCCTCGCTCCGGAAACGCGGTTGCCAATAGGAGGGGA CCGACCGCTCCTCGGATTGGCCGCGGGTTTCCACTGGCAGTTGTGGCCAT AGCATCGGTGAGTACCCCTTTCGGTGTGTTCCGGCTTGGACTACGTACCC CGGTAGCTTTTGTGGCAGTTGCATCGATGTGTACCTTTTTTCTGAATTCA TTTATTCTCTCCTGGTTGCGGTTGAGTAGTTAGACTGGTTAAGTGTTTCG GATAGCCCTTTGTGGCGATAGCATCGGAGAGTACTGCTGTACCTCTTTTT ACCTGGTAGATTAGGCTGCCCTCGGGTCGCTTTTGTGGCCATACCATCCA TGAATACCCCCTCTTTTTCTTCTAATGTAGAGTAGTACCTTGGGCGCCAT CCACGGTAGTGCGTACATTTGTTTTTCGGGGGGAAGGGGGATGGTGGTGA ATAATCCCCGGGTCAGGTCTGAAAATGCATTACGACGTTGATGACAGTCC TCTATTTGATCACACGTCAATTTTGGGAACTTTTTTCATGGGTAGTGCTC GGGTTTCAACGGTTTTACCGGCTCCCATTTGATATATTGTCTGACACGCA AGAAACCGGGGATGGTAGCGACACATCCCTTCCCTCTAGAACAGCTCCGA TTGTACTAAACAACTCAGGGTGGCGTGATTCTGGGGTGGCGATCACAAAT CAGTCGCCATATTTCTCGACTACGTTCATGCTACCAAGTTACGGCTACCT GGTTTGGTGGAAGGAAATGAGAAGTTGATCATATATGAACGGACGTAACG TTTGACTACGATTGTAGTTTTTTTTTGCGAATAAATGCATCTCGACGACG CCCGCAAAAAAACGAAGAATATCAGTGAACTCGTTATTTGTTTTGGTTGC AAAAGGTGTACCATATTGTTCAGGTACAAAAATTGTCACCAAAACAATTA AAAAGGGACGCCGCGAGATTCGAAGTCACGAACTAGAGACTAAACAAAAA GTAACACTCTAGACCATAAAGTCACAACATCAGCTTATATTTCATTGGAA ACGACTGTAGTTAGCATGTGACAGGTAACACATCGCTTCATGGGATTCGT GTCTCCAAAAAATGAATGAAATCGACCTTCGAACCCACCGACATGCCTCC AACTTTTTTTTTCCCTCATGGTTACACTTGAAGATGTGGCCATGGGTATG CCTGGTACGTTTTTCGTTTTTGTCATTTTGTGTCGAGTCTTACAGGGGAC GGGGGACCATTCCGATTCCATAACAAAAAAACTGTTCTGCGTAGCTTTCC AAATCTGCTGTTGTTTTCGGTTGGGCCACCGCAGTTGTCGATGTATGGCG ACATGCGTGCGGCTAAGCACCTTCTTGGGATGGTCAACACGCCTTGGCGA GCTTCACAGCGGACTCCTGCGGTTGGAGTGCGGCTCATTCGAAAGCTCTT AAATTGCGCTTTTCGAGGTATTTTTTTGTATGTGCTCGATTCCTGTAAGA CCCTGCCAAACACAAAATCCAAACCTCCCAAAATTGGGTGCCAGATGGTT CCACCATAGTACACAAAAAACACGCCAAAAGGCCGGGATCGCCGTGAAAA AAGCATCATCCTAATCTGCCAATAATTTACCGGAATATGTGCCGAAATAA TGAGGTGCGAGTCAGTTTAGTGCGGAGCACGAATCCGTCTTTGGACATGT CTAAATTTTGTGAAACAGCTATATGCGAAAGTGGCCTTTCCGTAGGACGA CGGAAACACGAATTTTCAAGGTTTAAGTTGAAAAAATATTGTTTTCAAGA AACAGCTGAAGATAATTGTGCTGATATGGGGGGAAAAAGGAACAAAACTT TTCGATTTTTCTCCATTTTTTTTCGCGCGGCTGCACGCGGCGCAATTGTT TTCTTTTCTCGTTGTAAATTGTTTACACGCTGCTAAAAAAACCAGCTCAT GCGACGATGGACCTTCGATCTCGAACATAGACTCAACCCACGGCCAACCC GCTTTGGTGTCGGGCAAGGCCAACGAGTGTACTCGGAGATACCAGGTGTC AGGCGGATGCGAGGTCTAGGGGGCGAGAGCTTGCCGGCGGCGTCCTACGC TCCTCTCCCAAACCTGAAATAAAAAATTAATCCATGTTTTGCCGTCCGGT AGGATGCAGCTCACGCTTCATGCGACTCGCCGAACACCTCACGGCGCTAC GCGCTTGGTGCAAGCAATGTCTTCCCGGTCGGTGAAAGCTCGACGTGCTC CGTCCCGGCATTGCAGGGGTGCGAGGGTCTATGGTCATACGACTGTGGCC ACGCATGATAAGGAGTACAACCCCTCCCCCCCGTTGACGTGAGCGCGATG GTAACCATCGTCGTTGTTATCGCTCCCTGCTCGAAACAAACACACGTCGT CGCCGAGAAGCTCCTCATGTTCCCAGCCAGTTACCGCTGCTTGTTCTGTT GAAATGCTGACGTGGGTTTCCCTTCGGGCAGGCTTTCTCTCCCACGCCTC CAACCCCCCGTCTCTAACTATGTATTTGTTTTTACGCTTTCATCTTGTTT AGCATGACTAGCTTGGGTTTCCTTCACCCGCCCCTCCCCTAACTTTTTTT TTCGGTGGATTCATTTTTTGTTTTTGCGGGTCTCCCCATCAACAGGCCCA TTCCCGCACACGCCCCCAACCCCCCCCCCCCTCTCCTACATTCTTTTCTC CCCTTCATTTTCTCTCTTTTTTTTAGGCCGGAGTGGGTTTCCCACTGGAC AGGCTTTCTCCCTCCGCGACGAGGCAGCTATTCCTGGAGAATTTCTCCTT TCCCACCTCCCGGGACTGCGCCGACGTGCTCTACTGCAAGCTGTTTGTTC AG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig6731:722..8373-

>mRNA_M-pyrifera_M_contig6731.16268.1 ID=mRNA_M-pyrifera_M_contig6731.16268.1|Name=mRNA_M-pyrifera_M_contig6731.16268.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig6731:722..8373- (Macrocystis pyrifera P11B4 male)
CGCAGTCCTCAGGTGGTAGCCGTGGTAACATCCCGAGACTGCAGGACGGT
CCAAGCCGCTTTGGCCCAGATCACTCGTCAGCGCAGTCCTCAGGTGGTAG
CCGTGGTAACATCCCGAGACTGCAGGACGGTCCAAGCCGCTTTGGCCCAG
ATCACTCGTCAGTGCCTTGCCGTGGGCGGGACAGCTTCGCGCCGTCCCCT
GTTTATGGACAGCCTCGGAGAGTGGTACACCTCGCTCTTCTGCCTTGCCG
TGGGCGGGACAGCTTCGCGCCGTCCCCTGTTTATGGACAGCCTCGGAGAG
TGGTACACCTCGCTCTTCGAGGAGGGGGAGGAGGAATGGGGGGAGGACGA
GGAGGAGGAGGGGGAGGAAGATGGAGAGAGGAGGGGGAGGAGGAATGGGG
GGAGGACGAGGAGGAGGAGGGGGAGGAAGATGGAGAGGGTGTGGAGGAGG
CAAGGAGGAGAAAAAGGAGGAAGCGGAGGCGCCCCGCCGTGGTGGTGCTC
CTCGAAGACGTCGAGGGAATAGACAAACAGGGGTGTGGAGGAGGCAAGGA
GGAGAAAAAGGAGGAAGCGGAGGCGCCCCGCCGTGGTGGTGCTCCTCGAA
GACGTCGAGGGAATAGACAAACAGGTACTAAGGGACCTCATGGACATGTT
GGCCCAGCCCCCTCGCTCCGGAAACGCGGTTGCCAATAGGAGGGGACCGA
CCGCTCCTCGGATTGGCCGCGGGTTTCCACTGGCAGTTGTGGCCATAGCA
TCGGTACTAAGGGACCTCATGGACATGTTGGCCCAGCCCCCTCGCTCCGG
AAACGCGGTTGCCAATAGGAGGGGACCGACCGCTCCTCGGATTGGCCGCG
GGTTTCCACTGGCAGTTGTGGCCATAGCATCGGCCGGAGTGGGTTTCCCA
CTGGACAGGCTTTCTCCCTCCGCGACGAGGCAGCTATTCCTGGAGAATTT
CTCCTTTCCCACCTCCCGGGACTGCGCCGACGTGCTCTACTGCAAGCTGT
TTGTTCAGGCCGGAGTGGGTTTCCCACTGGACAGGCTTTCTCCCTCCGCG
ACGAGGCAGCTATTCCTGGAGAATTTCTCCTTTCCCACCTCCCGGGACTG
CGCCGACGTGCTCTACTGCAAGCTGTTTGTTCAG
back to top