mRNA_M-pyrifera_M_contig67293.16265.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67293.16265.1
Unique NamemRNA_M-pyrifera_M_contig67293.16265.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: A0A1X7V0J9_AMPQE (EamA domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V0J9_AMPQE)

HSP 1 Score: 139 bits (351), Expect = 4.520e-36
Identity = 78/212 (36.79%), Postives = 123/212 (58.02%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACSLGGAQTNNPNAHPSTTGYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSMLFLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGF 636
            LP+T+V AN  IYQSA  F ++LS+ LL E   + K +AV  SI GV   S+   +  +   H S  GY++L+ ST LYAL EVL+ K A         + G     M  +GLMG+ ++L++WP   +   + +EPF WP  D    +L N ++D  +N +L + V ++SPL  + GT+   PAS+IVD++ +  +   + Y+G+ ++I+GF
Sbjct:  106 LPQTSVPANVAIYQSAVAFTFILSVPLLRESVTVVKILAVSFSITGVALVSVYSERDKSGPVHQSVLGYVYLVTSTILYALMEVLFKKLASFKDDPASGYNG-----MRMVGLMGIHTVLWMWPPLIVLHYSNVEPFHWPSKDILYQILYNTVLDVTFNASLFICVALSSPLFATVGTVTAIPASVIVDYIRNRRSSFPLVYVGMMMIIVGF 312          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: A0A0D2WPC7_CAPO3 (EamA domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WPC7_CAPO3)

HSP 1 Score: 133 bits (335), Expect = 3.550e-33
Identity = 82/220 (37.27%), Postives = 126/220 (57.27%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACSLGGAQTNNPNA--HPSTTGYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSMLFLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGFYLLNAD 654
            L  T+V AN  IY S+   V++LS   L EK    K  AV +S+GGV   S   + +++ ++  +PS  GYI ++VST LYA YEVLY       T  +      + SS   LG +G  ++L +WP   +   TG E F+ P ++    L+  AL+D+V+ + L LG+L++SPL ++ G ML  P SI+ D++ H T L  ++  G+A++ +GF LLN D
Sbjct:  222 LDHTSVAANTGIYNSSCIVVFILSALFLKEKVTKFKVAAVALSVGGVLMISFAPSSSSSDSSTVNPSALGYIMVVVSTVLYAAYEVLYRMICVDVTITDRVLY--VASSFKVLGYIGFWNLLLVWPVLILCHYTGWELFELPSSEALPYLVGAALIDSVFQILLYLGILISSPLFIAVGCMLSIPGSIVADYIFHGTVLPALALGGIAVLSVGFALLNYD 439          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: A0A5A8DQ33_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DQ33_CAFRO)

HSP 1 Score: 112 bits (279), Expect = 3.990e-25
Identity = 55/115 (47.83%), Postives = 85/115 (73.91%), Query Frame = 1
Query:  307 EIESSMLFLGLMGVGSILFLWPFFFIFDATGLEPFQWP-DADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGFYLLN 648
            + E S L +GL GV ++LF+WP   + DATGLEPF+WP  A+   +++ NA +D VYNV LL+G+L++SPL++S G M+V P+S++VD ++H+T    ++Y GVAL++LGF +L 
Sbjct:  340 QTELSALMMGLFGVATLLFVWPLIPLLDATGLEPFEWPIPAEKWEMMMLNAALDTVYNVLLLIGILISSPLVISVGVMMVVPSSMVVDGILHNTRFQPLAYGGVALIVLGFLVLK 454          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: A0A8J4PZE7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PZE7_9MYCE)

HSP 1 Score: 106 bits (265), Expect = 4.120e-23
Identity = 69/218 (31.65%), Postives = 113/218 (51.83%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACSLGGAQTNNP---NAHP-STTGYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSML--FLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGF 636
            LP T+V  +  +YQSA+ FV++ SIF+L EK  + K I V++ I GV   +L   Q+ +    N +P ST G + +++S  L+  YEVL +K+            G+   +++  F+GL+G  ++LF  P   I   +G EPF WP      +L+ N  +    N  +  G+ VTSPL +  G ++  PA++  D +        +S  G  L++ GF
Sbjct:  280 LPMTSVSTSTALYQSATVFVFIFSIFILKEKITILKTIPVVLFIAGVIGITLADNQSKSSTDDNQYPNSTLGDVLMLISALLWGFYEVLTTKFF-----------GDANRTVVNTFIGLVGFFNLLFGIPMIAILHVSGAEPFAWPTVKVFGMLVLNGFLGFGLNYLINWGLTVTSPLFIRSGELMAIPATLFFDIIFKHVLFPLISLPGFLLIVAGF 486          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: A0A151ZEX3_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZEX3_9MYCE)

HSP 1 Score: 102 bits (254), Expect = 8.110e-22
Identity = 69/218 (31.65%), Postives = 114/218 (52.29%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACSLGG--AQTNNPNAHPSTTGYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSML--FLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGFYL 642
            L  T V  ++ +YQSA+ +V++ SIF+L EK  + K I+V++ I GV   +L    ++ +N     + TG I +I+S  L+ALYEV+ +K             G +  +++  FLGL+G+  ++   P  FI   TG EPF +P   T  ++L N       N  +  G+ +TSPL +  G ++  P +++ D +V       VS  G  L++ GF L
Sbjct:  227 LTMTEVSTSSALYQSATIWVFLFSIFILKEKITILKCISVVLFIAGVVGITLADMTSEDHNKQYPNAVTGDILMIISAVLWALYEVMTTKLV-----------GNLNRTVVHTFLGLVGLYDMVLGIPVIFILSETGFEPFAFPTPKTFGMMLLNTAFSFGLNYLVNWGLSITSPLFVRAGELMCIPTTLVFDLIVKHIYFPLVSIPGFLLIVAGFIL 433          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: UPI0006448DB9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448DB9)

HSP 1 Score: 100 bits (249), Expect = 4.770e-21
Identity = 65/214 (30.37%), Postives = 115/214 (53.74%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACSLGGAQTNNPNAHPSTTGYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSML--FLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGF 636
            LP T V  +  +YQSA+ +V+V SIF+L +K    K +++++ IGGV   +L    ++N     +  G I +IVS  L+ALYEVL +K+            GE+  +++  ++G + + +++F  P   I   +GLEP++ P   T  +L A+A +  + N  +  G+ VTSPL +  G ++  P ++I D ++       ++  G   +I GF
Sbjct:  216 LPLTEVSTSTALYQSATIWVFVFSIFILKDKPTPLKIVSIVLFIGGVVGITLADRSSSNSTFPKAVLGDILMIVSAVLWALYEVLTTKFV-----------GEVSRTLVNSYVGFIALWNVVFGVPMLIIISVSGLEPWETPSWTTFGMLTASASVSFMLNYLINWGLSVTSPLFVRSGELMTIPTTLIFDIIIKHVPFPPIAIPGFLCIIGGF 418          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: D3BUR3_POLPP (EamA domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BUR3_POLPP)

HSP 1 Score: 97.1 bits (240), Expect = 7.720e-20
Identity = 64/217 (29.49%), Postives = 112/217 (51.61%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACSLGGAQTNNPNAHPSTTGYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSML--FLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGFYLL 645
            LP T V  ++ +YQSA+ +V++ SI +L E+  L K I+  + I GV   +L    +++     +  G I +IVS FL+A+YEV  +K+            G++  +++  ++G + V S LF  P   I   TG E +  PD  T   +  +AL+  + N  +  G+ VTSPL +  G ++  P +++ D +V   +   V+  G   ++ GF L+
Sbjct:  225 LPLTEVSTSSALYQSATVWVFIFSIVILKERPTLLKCISTGLFIAGVIGITLADKSSSDSAYPKAVLGDILMIVSAFLWAMYEVFTTKFV-----------GDVPRTLVNTYIGFIAVWSTLFGIPMLIILSVTGFESWVTPDLKTFGFITLSALVACMLNYLINWGLSVTSPLFVRSGELMTIPTTLVFDIIVKHVHFPLVAIPGFLCIVAGFVLM 430          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: F4QFS1_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QFS1_CAVFA)

HSP 1 Score: 95.9 bits (237), Expect = 2.010e-19
Identity = 70/218 (32.11%), Postives = 118/218 (54.13%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACSLGGAQTNNPNA-HPSTT-GYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSML--FLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGFYL 642
            LP T V  +  I+QSA+ +V+  SIF+L +K  + K + VL  +GGV   S+   QTN  ++ +P+   G I +IVS+ ++ALYEVL +K+            G+ + +++  F+G +G+ S+L   P       +G E F  PD  T  ++L + L+  V N  +  G+ VTSPL +  G ++  P ++I D +        ++  G +L+I+GF L
Sbjct:  219 LPLTEVSTSNAIFQSATVWVFFFSIFILKDKVTILKIVYVLFFVGGVIGISIADHQTNGSSSKYPNPLLGDILMIVSSIMWALYEVLTTKFT-----------GDCKRTVVNTFIGGIGLFSVLIGIPMLLAVHYSGFERFVLPDQRTFLLILGSNLLAFVLNYLINWGLSVTSPLHVRSGELMTIPFTLIFDIVFKHMTFYPIAIPGFSLIIIGFVL 425          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: L8GP42_ACACA (EamA domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GP42_ACACA)

HSP 1 Score: 95.5 bits (236), Expect = 2.530e-19
Identity = 47/113 (41.59%), Postives = 77/113 (68.14%), Query Frame = 1
Query:  310 IESSMLFLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGFYLLN 648
            +E +MLF+GL+GV +IL  WP   I D TG+E F+ P   +   +L    +DA++N  L+LG++++SPL +S G++L  PAS++ D+L+H T L  +SY+G+  +++GF LL 
Sbjct:  308 VEHTMLFIGLLGVWTILLAWPGIIIVDKTGIESFELPHGKSLQGILITMGLDALFNCLLILGIVISSPLFISVGSLLTIPASVVSDWLLHGTVLPILSYMGMLAIVVGFLLLT 420          
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Match: A0A2S7YFJ6_BEABA (EamA domain-containing protein n=5 Tax=Beauveria TaxID=5581 RepID=A0A2S7YFJ6_BEABA)

HSP 1 Score: 90.1 bits (222), Expect = 2.030e-17
Identity = 68/228 (29.82%), Postives = 115/228 (50.44%), Query Frame = 1
Query:    1 LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTACS---LGGAQTNNPNAHP-STTGYIFL-----IVSTFLYALYEVLYSKYAEKHTHLEPEHQGEIESSMLFLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTT-TILLANALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFVSYLGVALVILGFYLLNAD 654
            L  T+V +   +  ++S +  V       E F+L+K   VL S+ G+   S   L G+   +  + P  TTG I +     ++S  +Y +Y  +  +       ++           LF GL+GV ++LFLWP FF+F  TG+EPFQ P       I+LAN+L   V ++     +L+T+PLI++ G  L  P S+I + + +    +FV ++G A+V L F  ++ +
Sbjct:  215 LEYTSVASVTILTSTSSIWTLVFCAIFEVESFSLRKLFGVLASLIGIVLISTVDLTGSSDEHRGSFPHKTTGQIAIGDSMALISAVVYGMYVTVMKRRVGDEDKVDMR---------LFFGLVGVFNMLFLWPLFFVFHWTGIEPFQLPPTGKIWAIILANSLSSFVSDIFWAFAMLLTTPLIVTVGLSLTIPLSLIGEMIQYGQYSSFVYWIGAAVVFLSFVFVSNE 433          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67293.16265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7V0J9_AMPQE4.520e-3636.79EamA domain-containing protein n=1 Tax=Amphimedon ... [more]
A0A0D2WPC7_CAPO33.550e-3337.27EamA domain-containing protein n=1 Tax=Capsaspora ... [more]
A0A5A8DQ33_CAFRO3.990e-2547.83Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A8J4PZE7_9MYCE4.120e-2331.65Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A151ZEX3_9MYCE8.110e-2231.65Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
UPI0006448DB94.770e-2130.37hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BUR3_POLPP7.720e-2029.49EamA domain-containing protein n=1 Tax=Polysphondy... [more]
F4QFS1_CAVFA2.010e-1932.11Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
L8GP42_ACACA2.530e-1941.59EamA domain-containing protein n=1 Tax=Acanthamoeb... [more]
A0A2S7YFJ6_BEABA2.030e-1729.82EamA domain-containing protein n=5 Tax=Beauveria T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67293contigM-pyrifera_M_contig67293:3..839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.5
Seed ortholog evalue2.4e-28
Seed eggNOG ortholog192875.XP_004347835.1
KEGG koko:K15289
KEGG TC2.A.7.24.1,2.A.7.24.4,2.A.7.24.6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activity
EggNOG OGsCOG0697@1,KOG2765@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons2
Model size654
Cds size654
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816563.121466-CDS-M-pyrifera_M_contig67293:2..3171622816563.121466-CDS-M-pyrifera_M_contig67293:2..317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67293 3..317 +
1692278048.573253-CDS-M-pyrifera_M_contig67293:2..3171692278048.573253-CDS-M-pyrifera_M_contig67293:2..317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67293 3..317 +
1622816563.1340864-CDS-M-pyrifera_M_contig67293:500..8391622816563.1340864-CDS-M-pyrifera_M_contig67293:500..839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67293 501..839 +
1692278048.5893204-CDS-M-pyrifera_M_contig67293:500..8391692278048.5893204-CDS-M-pyrifera_M_contig67293:500..839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67293 501..839 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67293.16265.1prot_M-pyrifera_M_contig67293.16265.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67293 3..839 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67293.16265.1

>prot_M-pyrifera_M_contig67293.16265.1 ID=prot_M-pyrifera_M_contig67293.16265.1|Name=mRNA_M-pyrifera_M_contig67293.16265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp
LPRTAVGANATIYQSASGFVYVLSIFLLNEKFNLQKAIAVLVSIGGVTAC
SLGGAQTNNPNAHPSTTGYIFLIVSTFLYALYEVLYSKYAEKHTHLEPEH
QGEIESSMLFLGLMGVGSILFLWPFFFIFDATGLEPFQWPDADTTTILLA
NALMDAVYNVALLLGVLVTSPLILSCGTMLVAPASIIVDFLVHSTNLTFV
SYLGVALVILGFYLLNAD
back to top

mRNA from alignment at M-pyrifera_M_contig67293:3..839+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67293.16265.1 ID=mRNA_M-pyrifera_M_contig67293.16265.1|Name=mRNA_M-pyrifera_M_contig67293.16265.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=837bp|location=Sequence derived from alignment at M-pyrifera_M_contig67293:3..839+ (Macrocystis pyrifera P11B4 male)
CTGCCTCGCACCGCCGTGGGTGCCAACGCCACCATCTACCAGTCTGCGTC GGGCTTTGTGTATGTGCTGTCCATTTTCCTGCTGAACGAAAAGTTCAACC TCCAAAAAGCAATCGCAGTGCTCGTGTCCATCGGAGGCGTCACGGCGTGC TCGCTAGGTGGCGCACAGACCAACAACCCAAACGCACACCCTTCCACCAC CGGGTACATCTTCCTCATCGTCTCCACCTTCCTCTACGCGCTCTACGAGG TGCTCTACTCCAAGTACGCAGAAAAACACACCCACCTGGAACCAGAGCAC CAAGGGGAAATCGAAGTGGACGTGGGGCACATTGACACGCCTCTGGTGGC GAGGAGAGGCACCGAGGAGAAGGCAGACGCACCGCTCCACAGCATCCAGA GACCTTCTTCCCGATCGCACTCGCTCTCCTCCTCCCTGTCCTCCTCGTCG GGCGAAGAAGACGGGGAAGAATTCTCCACCTTCCTGCTGCAACTCGAGTC CAGCATGCTATTCTTGGGCCTCATGGGAGTGGGCTCCATCCTCTTCTTGT GGCCCTTCTTCTTCATCTTCGACGCCACTGGCTTGGAGCCGTTCCAATGG CCAGACGCAGACACCACCACCATCCTCCTCGCCAATGCTCTCATGGACGC AGTCTACAACGTCGCCCTGCTCCTCGGCGTGCTCGTCACGTCTCCGCTCA TCCTCTCCTGTGGCACCATGCTCGTGGCACCCGCCTCCATCATCGTCGAC TTCCTCGTCCACTCCACCAACCTCACCTTCGTCTCCTACCTTGGCGTCGC GCTCGTCATCCTTGGCTTCTACCTCCTCAACGCCGAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig67293:3..839+

>mRNA_M-pyrifera_M_contig67293.16265.1 ID=mRNA_M-pyrifera_M_contig67293.16265.1|Name=mRNA_M-pyrifera_M_contig67293.16265.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig67293:3..839+ (Macrocystis pyrifera P11B4 male)
CTGCCTCGCACCGCCGTGGGTGCCAACGCCACCATCTACCAGTCTGCGTC
GGGCTTTGTGTATGTGCTGTCCATTTTCCTGCTGAACGAAAAGTTCAACC
TCCAAAAAGCAATCGCAGTGCTCGTGTCCATCGGAGGCGTCACGGCGTGC
TCGCTAGGTGGCGCACAGACCAACAACCCAAACGCACACCCTTCCACCAC
CGGGTACATCTTCCTCATCGTCTCCACCTTCCTCTACGCGCTCTACGAGG
TGCTCTACTCCAAGTACGCAGAAAAACACACCCACCTGGAACCAGAGCAC
CAAGGGGAAATCGAACTGCCTCGCACCGCCGTGGGTGCCAACGCCACCAT
CTACCAGTCTGCGTCGGGCTTTGTGTATGTGCTGTCCATTTTCCTGCTGA
ACGAAAAGTTCAACCTCCAAAAAGCAATCGCAGTGCTCGTGTCCATCGGA
GGCGTCACGGCGTGCTCGCTAGGTGGCGCACAGACCAACAACCCAAACGC
ACACCCTTCCACCACCGGGTACATCTTCCTCATCGTCTCCACCTTCCTCT
ACGCGCTCTACGAGGTGCTCTACTCCAAGTACGCAGAAAAACACACCCAC
CTGGAACCAGAGCACCAAGGGGAAATCGAATCCAGCATGCTATTCTTGGG
CCTCATGGGAGTGGGCTCCATCCTCTTCTTGTGGCCCTTCTTCTTCATCT
TCGACGCCACTGGCTTGGAGCCGTTCCAATGGCCAGACGCAGACACCACC
ACCATCCTCCTCGCCAATGCTCTCATGGACGCAGTCTACAACGTCGCCCT
GCTCCTCGGCGTGCTCGTCACGTCTCCGCTCATCCTCTCCTGTGGCACCA
TGCTCGTGGCACCCGCCTCCATCATCGTCGACTTCCTCGTCCACTCCACC
AACCTCACCTTCGTCTCCTACCTTGGCGTCGCGCTCGTCATCCTTGGCTT
CTACCTCCTCAACGCCGACTCCAGCATGCTATTCTTGGGCCTCATGGGAG
TGGGCTCCATCCTCTTCTTGTGGCCCTTCTTCTTCATCTTCGACGCCACT
GGCTTGGAGCCGTTCCAATGGCCAGACGCAGACACCACCACCATCCTCCT
CGCCAATGCTCTCATGGACGCAGTCTACAACGTCGCCCTGCTCCTCGGCG
TGCTCGTCACGTCTCCGCTCATCCTCTCCTGTGGCACCATGCTCGTGGCA
CCCGCCTCCATCATCGTCGACTTCCTCGTCCACTCCACCAACCTCACCTT
CGTCTCCTACCTTGGCGTCGCGCTCGTCATCCTTGGCTTCTACCTCCTCA
ACGCCGAC
back to top