prot_M-pyrifera_M_contig67212.16257.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67212.16257.1
Unique Nameprot_M-pyrifera_M_contig67212.16257.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: D8LC88_ECTSI (RNA-dependent RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC88_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.370e-19
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIP 76
            +EI +FF+ Y+ NDNLG IANAHLV AD SP+GA+  ECL+LAALHS AVDF KSGVPAV P
Sbjct:  761 KEIADFFLKYIQNDNLGKIANAHLVRADLSPLGARCDECLQLAALHSKAVDFPKSGVPAVFP 822          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: A0A433BKK0_9FUNG (RNA-dependent RNA polymerase (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433BKK0_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 1.680e-19
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    1 KNKTPTGHVVKTIGQEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAV 74
            K+    G V K    +I  FFVNY++NDNLG+IANAHL HAD+SP GAK   CLKLA LHS AVDF K+G PA+
Sbjct:   40 KSSYKPGEVDKVEILDIKRFFVNYILNDNLGMIANAHLAHADKSPEGAKDGRCLKLAQLHSIAVDFPKTGNPAI 113          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: D8LNY3_ECTSI (RNA-dependent RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY3_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.500e-19
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIP 76
            +EI +FF+ Y+ NDNLG IANAHLV AD SP GA+  ECL+LAALHS AVDF KSGVPAV P
Sbjct:  467 KEIADFFLKYIQNDNLGKIANAHLVRADLSPFGARCDECLQLAALHSKAVDFPKSGVPAVFP 528          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: A0A835IYY2_9MAGN (RNA-dependent RNA polymerase n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IYY2_9MAGN)

HSP 1 Score: 89.7 bits (221), Expect = 3.490e-19
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIP 76
            +EI EFFVNY++NDNLGVIA AHLVHAD+ P  A+  +CL LA LHS AVDF K+G PA +P
Sbjct:  894 EEIQEFFVNYMINDNLGVIATAHLVHADREPEKARSKKCLNLATLHSMAVDFAKNGAPAEMP 955          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: M8AI48_TRIUA (RNA-dependent RNA polymerase n=2 Tax=Triticum TaxID=4564 RepID=M8AI48_TRIUA)

HSP 1 Score: 87.4 bits (215), Expect = 4.820e-19
Identity = 39/63 (61.90%), Postives = 52/63 (82.54%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIPK 77
            QEI ++FV+Y++ND+LG I+ AHLVHAD+ P+ A+  ECL+LAALHS AVDF KSG PA +P+
Sbjct:   28 QEIQKYFVDYMINDSLGAISTAHLVHADRHPMKARSPECLQLAALHSMAVDFAKSGAPAEMPR 90          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: A0A453C5U7_AEGTS (RNA-dependent RNA polymerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453C5U7_AEGTS)

HSP 1 Score: 86.3 bits (212), Expect = 1.080e-18
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIPK 77
            QEI ++FV+Y++ND+LG I+ AHLVHAD+ P+ A+  ECL+LAALHS AVDF K+G PA +P+
Sbjct:   14 QEIQKYFVDYMINDSLGAISTAHLVHADRHPMKARSPECLQLAALHSMAVDFAKTGAPAEMPR 76          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: A0A0A9F2B6_ARUDO (RNA-dependent RNA polymerase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9F2B6_ARUDO)

HSP 1 Score: 83.2 bits (204), Expect = 1.570e-18
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIPK 77
            +EI + FV+Y++ND LG+I+ AHL+HAD  P+ A+  ECL+LAALHS AVDF K+G PA +P+
Sbjct:   18 EEIQKHFVDYMINDALGIISTAHLIHADHDPLKARSPECLQLAALHSMAVDFAKTGAPAEMPR 80          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: A0A2K3PMX5_TRIPR (RNA-dependent RNA polymerase n=3 Tax=Trifolium TaxID=3898 RepID=A0A2K3PMX5_TRIPR)

HSP 1 Score: 87.4 bits (215), Expect = 2.260e-18
Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIPK 77
            +E+ E+F NY++ND+LG+IANAH VHAD+ P+ A    C+KLA L STAVDF K+G+PAVIP+
Sbjct:  846 EEVEEYFTNYILNDSLGIIANAHTVHADKEPLKAMAEPCIKLAKLFSTAVDFPKTGIPAVIPR 908          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: S8CG21_9LAMI (RNA-dependent RNA polymerase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CG21_9LAMI)

HSP 1 Score: 87.0 bits (214), Expect = 3.080e-18
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0
Query:   15 QEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIPK 77
            QEI  FF +Y+V+D LG I+NAHLVHAD+ P  A  S+CL+LAALHSTAVD+ KSG PA +P+
Sbjct:  844 QEIQRFFADYMVSDTLGAISNAHLVHADREPEKALSSKCLELAALHSTAVDYAKSGAPAAMPR 906          
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Match: A0A1S3VQP1_VIGRR (RNA-dependent RNA polymerase n=7 Tax=Vigna TaxID=3913 RepID=A0A1S3VQP1_VIGRR)

HSP 1 Score: 87.0 bits (214), Expect = 3.080e-18
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0
Query:   16 EITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKGSECLKLAALHSTAVDFGKSGVPAVIPK 77
            E+ E+F NY+VND+LG+IANAH V AD+ P  A  +ECLKLA L STAVDF K+GVPAVIP+
Sbjct:  853 EVEEYFTNYMVNDSLGIIANAHTVFADRQPKKAMSAECLKLAKLFSTAVDFPKTGVPAVIPR 914          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67212.16257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC88_ECTSI1.370e-1970.97RNA-dependent RNA polymerase n=1 Tax=Ectocarpus si... [more]
A0A433BKK0_9FUNG1.680e-1960.81RNA-dependent RNA polymerase (Fragment) n=2 Tax=Ji... [more]
D8LNY3_ECTSI2.500e-1970.97RNA-dependent RNA polymerase n=1 Tax=Ectocarpus si... [more]
A0A835IYY2_9MAGN3.490e-1966.13RNA-dependent RNA polymerase n=1 Tax=Coptis chinen... [more]
M8AI48_TRIUA4.820e-1961.90RNA-dependent RNA polymerase n=2 Tax=Triticum TaxI... [more]
A0A453C5U7_AEGTS1.080e-1860.32RNA-dependent RNA polymerase n=1 Tax=Aegilops taus... [more]
A0A0A9F2B6_ARUDO1.570e-1857.14RNA-dependent RNA polymerase n=1 Tax=Arundo donax ... [more]
A0A2K3PMX5_TRIPR2.260e-1860.32RNA-dependent RNA polymerase n=3 Tax=Trifolium Tax... [more]
S8CG21_9LAMI3.080e-1863.49RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ge... [more]
A0A1S3VQP1_VIGRR3.080e-1866.13RNA-dependent RNA polymerase n=7 Tax=Vigna TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 15..74
e-value: 2.3E-17
score: 62.9
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 14..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67212contigM-pyrifera_M_contig67212:309..539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67212.16257.1mRNA_M-pyrifera_M_contig67212.16257.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67212 309..539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67212.16257.1 ID=prot_M-pyrifera_M_contig67212.16257.1|Name=mRNA_M-pyrifera_M_contig67212.16257.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
KNKTPTGHVVKTIGQEITEFFVNYLVNDNLGVIANAHLVHADQSPVGAKG
SECLKLAALHSTAVDFGKSGVPAVIPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007855RNA-dep_RNA_pol_euk-typ