mRNA_M-pyrifera_M_contig67195.16253.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_M-pyrifera_M_contig67195.16253.1
Unique Name	mRNA_M-pyrifera_M_contig67195.16253.1
Type	mRNA
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))

Homology

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: A0A5A8DFA9_CAFRO (HRDC domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFA9_CAFRO)

HSP 1 Score: 228 bits (580), Expect = 4.850e-66
Identity = 146/315 (46.35%), Postives = 177/315 (56.19%), Query Frame = 1

Query:   49 TLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELR-SELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLT-SATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQDSAALRA 987
            T V+T   + A+ +HL     V+  A D+EAH+EHSFQG+TCL+Q+STRW  FLVD L L   EL  LN  F DP ++K+ HGCDRDV+WLQRC GI++V +FDTGQAARVL LP   LAYLL   A V  DKSLQ ADWRRR      + P +L YA EDT +L+PI DRLRN LLD    +                                + EV  RS  LC + Y  P     A AR LAAR  ++        D +GRAL      AL  WRD + R  DEA  T+LPKRA++RIA A P   A L A
Sbjct:  255 TWVDTPAAVAAMAEHLGEQR-VQSVAIDVEAHNEHSFQGLTCLIQVSTRWQDFLVDPLALGPEELAPLNAVFTDPAVLKLLHGCDRDVVWLQRCCGIYLVGVFDTGQAARVLDLPSAGLAYLLRTMAGVEADKSLQRADWRRRP-----LPPAMLGYAAEDTRFLVPIADRLRNRLLDQGGEAA-------------------------------VMEVLDRSRKLCAQTYTIPAFRPGAGARDLAARAGLKLD------DAQGRAL-----DALSDWRDLVARATDEAPHTILPKRALLRIAEAAPVTLAGLAA 521

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: UPI000C03C047 (exosome component 10-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03C047)

HSP 1 Score: 223 bits (568), Expect = 2.020e-64
Identity = 133/308 (43.18%), Postives = 174/308 (56.49%), Query Frame = 1

Query:   49 TLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLTSATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQDS 972
            T++ T+EQLE L QHL T   V EFA DLEAHS  SFQG  CLMQ+ST+   FL+DTLELRSEL+ LN++F +P I+KV HG D D+ WLQR FGI++V +FDTGQAARVL+  K+SLA+LL  +  V  +K  QLADWR R      +   ++RYA EDT+YLL I DR+ N+L+    A+                              NLL+ V+ RS  +C + YEKP  TS + R +  +         M            AF  L  WRD I R  DE+   VLP   M +IA  +P+++
Sbjct:  188 TMIETAEQLEQLCQHLAT---VTEFAVDLEAHSYRSFQGFCCLMQISTQHQDFLIDTLELRSELQILNDYFTNPNILKVLHGADMDIGWLQRDFGIYVVNMFDTGQAARVLNYEKYSLAFLLKKFCDVTANKQYQLADWRIRP-----LPSEMVRYAREDTHYLLYICDRMHNDLIKRGNANN-----------------------------NLLQSVYSRSKDICLKCYEKPLFTSESYRKVLEKHKRTFNTAQM-----------HAFRLLFAWRDNIAREEDESCGFVLPNHMMFQIAETMPREA 447

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: A0A5A8EKH7_CAFRO (HRDC domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EKH7_CAFRO)

HSP 1 Score: 228 bits (580), Expect = 3.290e-64
Identity = 146/315 (46.35%), Postives = 177/315 (56.19%), Query Frame = 1

Query:   49 TLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELR-SELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLT-SATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQDSAALRA 987
            T V+T   + A+ +HL     V+  A D+EAH+EHSFQG+TCL+Q+STRW  FLVD L L   EL  LN  F DP ++K+ HGCDRDV+WLQRC GI++V +FDTGQAARVL LP   LAYLL   A V  DKSLQ ADWRRR      + P +L YA EDT +L+PI DRLRN LLD    +                                + EV  RS  LC + Y  P     A AR LAAR  ++        D +GRAL      AL  WRD + R  DEA  T+LPKRA++RIA A P   A L A
Sbjct:  255 TWVDTPAAVAAMAEHLGEQR-VQSVAIDVEAHNEHSFQGLTCLIQVSTRWQDFLVDPLALGPEELAPLNAVFTDPAVLKLLHGCDRDVVWLQRCCGIYLVGVFDTGQAARVLDLPSAGLAYLLRTMAGVEADKSLQRADWRRRP-----LPPAMLGYAAEDTRFLVPIADRLRNRLLDQGGEAA-------------------------------VMEVLDRSRKLCAQTYTIPAFRPGAGARDLAARAGLKLD------DAQGRAL-----DALSDWRDLVARATDEAPHTILPKRALLRIAEAAPVTLAGLAA 521

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: UPI0009E370EF (exosome component 10-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E370EF)

HSP 1 Score: 224 bits (571), Expect = 3.620e-63
Identity = 135/310 (43.55%), Postives = 178/310 (57.42%), Query Frame = 1

Query:   46 VTLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLTSAT-ARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQDS 972
            +TLV T+EQL+ L QHL     V EFA DLE HS  SFQG  CLMQ+STR H +L+DTLELR+EL+ LN+ F +P+I+KV HG D D+ WLQR FG+++V +FDTGQAARVL+  KFSLAYLL  +  V  +K  QLADWR R      +   ++RYA EDT+YLL I DRL NEL+ +  A++                             NL++ V+ RS  +C + YEKP  TS +  + L         +Q+             AF  L  WRD I R  DE+A  VLP   M +IA  +P+++
Sbjct:  279 LTLVETTEQLQELSQHL---SAVSEFAVDLEHHSYRSFQGFCCLMQISTRDHDYLIDTLELRNELQILNDSFTNPKILKVFHGADMDIGWLQRDFGVYVVNMFDTGQAARVLNFEKFSLAYLLKKFCDVTANKQYQLADWRIRP-----LPLEMVRYAREDTHYLLYICDRLHNELIKSGNANS-----------------------------NLIQSVYARSKDVCLKRYEKPLFTSVSFQKVLEKHKQTFNTEQIC------------AFRLLYAWRDNIAREEDESAGFVLPNHMMFQIAETMPREA 539

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: A7SSB3_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SSB3_NEMVE)

HSP 1 Score: 218 bits (555), Expect = 5.900e-63
Identity = 140/307 (45.60%), Postives = 172/307 (56.03%), Query Frame = 1

Query:   49 TLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLTSATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQD 969
            TLV T EQLE+L Q L      +EFA DLE HS  SF G  CLMQ+STR H FLVDTLELR++L  LNE F +P I+KV HG D DV WLQR FGI++V +FDTGQA+RVL+L +FSLA+LL  +  V  DK  QLADWR R      +   ++RYA EDT+YLL I+DRLRNEL+     +                              NLL  V+ RS  +C + YEKP  TS +   L  +     R+ L  V         RAF AL  WRD I R  DE+   VLP   +  IA  LP++
Sbjct:  251 TLVETVEQLESLSQKLMEA---QEFAVDLEHHSYRSFLGFVCLMQISTRDHDFLVDTLELRNDLHLLNESFTNPNILKVFHGADMDVGWLQRDFGIYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTADKQYQLADWRIRP-----LPEEMIRYAREDTHYLLYIHDRLRNELIRTGNENN-----------------------------NLLLSVYSRSTEVCQKHYEKPLFTSESYMNLYTK----QRRPLNPVQL-------RAFRALYAWRDTIARREDESYGYVLPNHMLFTIAETLPRE 509

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: A0A6P8IPB7_ACTTE (exosome component 10-like n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IPB7_ACTTE)

HSP 1 Score: 218 bits (556), Expect = 3.070e-61
Identity = 133/307 (43.32%), Postives = 171/307 (55.70%), Query Frame = 1

Query:   49 TLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLTSATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQD 969
            T V T EQLE L Q L +   V EFA DLE HS  SFQG  CLMQ+STR H +LVDTLELRS+L  LNE F +P+I+KV HG D D+ WLQR FG++IV +FDTGQA+RVL+  +FSL+YLL  +  V  +K  QLADWR R      +   +++YA+EDT+YLL IYDRLRNEL+ +  A                               NLL  V++RS  +C + YEKP  T  +   L  +       Q + V           F AL  WRD I R  DE+   VLP   +  +  +LP++
Sbjct:  271 TYVETVEQLEELCQKLSS---VTEFAVDLEHHSYRSFQGFVCLMQISTRDHDYLVDTLELRSDLSILNESFTNPKILKVLHGADMDIGWLQRDFGLYIVNMFDTGQASRVLNYERFSLSYLLKKFCGVTANKQYQLADWRIRP-----LPAEMIQYAIEDTHYLLYIYDRLRNELIKSGNAQN-----------------------------NLLMSVYQRSKAVCLKKYEKPLFTKESYLNLYKKQRRPLNPQQLQV-----------FQALYEWRDTIARQEDESYGYVLPNHMLFNLTESLPRE 529

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: UPI00139000DC (exosome component 10 isoform X1 n=3 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00139000DC)

HSP 1 Score: 218 bits (555), Expect = 6.610e-61
Identity = 140/307 (45.60%), Postives = 172/307 (56.03%), Query Frame = 1

Query:   49 TLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLTSATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQD 969
            TLV T EQLE+L Q L      +EFA DLE HS  SF G  CLMQ+STR H FLVDTLELR++L  LNE F +P I+KV HG D DV WLQR FGI++V +FDTGQA+RVL+L +FSLA+LL  +  V  DK  QLADWR R      +   ++RYA EDT+YLL I+DRLRNEL+     +                              NLL  V+ RS  +C + YEKP  TS +   L  +     R+ L  V         RAF AL  WRD I R  DE+   VLP   +  IA  LP++
Sbjct:  274 TLVETVEQLESLSQKLMEA---QEFAVDLEHHSYRSFLGFVCLMQISTRDHDFLVDTLELRNDLHLLNESFTNPNILKVFHGADMDVGWLQRDFGIYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTADKQYQLADWRIRP-----LPEEMIRYAREDTHYLLYIHDRLRNELIRTGNENN-----------------------------NLLLSVYSRSTEVCQKHYEKPLFTSESYMNLYTK----QRRPLNPVQL-------RAFRALYAWRDTIARREDESYGYVLPNHMLFTIAETLPRE 532

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: UPI001E1DCEFC (exosome component 10-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCEFC)

HSP 1 Score: 216 bits (549), Expect = 6.610e-60
Identity = 134/308 (43.51%), Postives = 171/308 (55.52%), Query Frame = 1

Query:   49 TLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLTSATARTLAAR-LDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQD 969
            T ++  EQL  L++ L+      E A DLE HS  +FQGITCLMQ+STR H +L+DTL+LR +L+CLNE F DP IVKV HG D DV WLQR  G++IV +FDTGQAARV++L +FSLA+LL  Y  V  DK  QLADWR R   D      L +YA EDT+YLL IYD+++NELL+    S                              NLL  V  RS  +C +VY KP+ TS   + L  +   V   QQL             A + +  WRD   RL DE+   VLP   M++I   LP++
Sbjct:  214 TYISKVEQLPDLIEELKKQ---TEIAVDLEHHSYRTFQGITCLMQISTRVHDYLIDTLDLRGDLQCLNEVFTDPRIVKVFHGADMDVEWLQRDLGVYIVNMFDTGQAARVMNLGRFSLAHLLHHYCNVTADKQYQLADWRIRPLPD-----ELKKYAREDTHYLLHIYDKMKNELLERGNESK-----------------------------NLLMSVLHRSTQVCLKVYRKPQCTSEGYKDLYVKNKKVFNSQQLF------------ALSEMFTWRDETARLEDESYGYVLPNHMMLQICDILPRE 472

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: A0A7S1C3K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3K2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 3.530e-58
Identity = 134/313 (42.81%), Postives = 170/313 (54.31%), Query Frame = 1

Query:   46 VTLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEK-PRLTSATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALPQDSAAL 981
            VT V+T   L+ LV  L     VRE A DLE HS HSFQG  CLMQLSTR   +LVDT+ LR+ L  LN  F +P +VKV HGCD DV WLQR FG+++V +FDTGQA RVL   ++SLA+LL  +  V+ +K+ QLADWR R      ++  +++YA EDT+YLL IYDRL NELLD                                   NLL+    RS      VY K P  T +    L  RL           D    A + R FAAL  WRDR+ R VDE+   VLP+ A+ ++A  +P ++ AL
Sbjct:  270 VTWVDTPAALDQLVAALDRED-VRELAIDLENHSLHSFQGFVCLMQLSTRDADWLVDTIALRAHLGVLNHVFTNPNVVKVLHGCDHDVRWLQRDFGLYLVNVFDTGQATRVLRYERYSLAFLLKKFCDVDANKAYQLADWRIRP-----LSREMMKYAREDTHYLLGIYDRLVNELLDRGARERV----------------------------NLLDSTLARSKERSQYVYAKFPEWTPSAHEALMTRLGF---------DAGTPASKVRVFAALYEWRDRVAREVDESTGVVLPQLALKKLATEVPTNTDAL 539

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BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Match: A0A5D6Y008_9STRA (HRDC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y008_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.690e-57
Identity = 130/303 (42.90%), Postives = 169/303 (55.78%), Query Frame = 1

Query:   55 VNTSEQLEALVQHLRTGGGVREFAFDLEAHSEHSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCDRDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSLQLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTTPXXXXXXXXXXXXXXXXXXXXXXXXXXPNLLEEVWRRSHGLCCRVYEKPRLTSATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLVDEAAETVLPKRAMVRIAVALP 963
            VN+ E L  +V  L +   VR  A DLE HS  S+ G+ CLMQ+ST    FLVDTL LR++L+ LN  F DP  VKV HG D D+LWLQR  G++IV +FDTGQAAR+L  P+FSLAYLL  +  V+ DK  QLADWR R      +  N+++YA EDT YLL IYD L+ ELL A+  +                              +LL E  +RS  LC +VYEKP         L+ RL     +  + +  E   L+ R FA L +WRDR+ R  DE+   VLP  A++++A A P
Sbjct:  260 VNSDETLAEMVAAL-SQPAVRVLAVDLEHHSYRSYMGLVCLMQISTATEDFLVDTLALRAKLQVLNRVFCDPAKVKVLHGADMDILWLQRDLGLYIVNMFDTGQAARLLQYPRFSLAYLLKRHCGVDADKQYQLADWRARP-----LDANMVKYAREDTRYLLYIYDALKLELLAASDKTRA----------------------------SLLFETLQRSSALCLQVYEKPSAREDDCEALSDRL-----KSTVGL-AELSPLQRRVFALLYFWRDRVARREDESTGYVLPNHALMKLAQAAP 522

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig67195.16253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5A8DFA9_CAFRO	4.850e-66	46.35	HRDC domain-containing protein n=1 Tax=Cafeteria r...	[more]
UPI000C03C047	2.020e-64	43.18	exosome component 10-like n=1 Tax=Stylophora pisti...	[more]
A0A5A8EKH7_CAFRO	3.290e-64	46.35	HRDC domain-containing protein n=3 Tax=Cafeteria r...	[more]
UPI0009E370EF	3.620e-63	43.55	exosome component 10-like n=1 Tax=Orbicella faveol...	[more]
A7SSB3_NEMVE	5.900e-63	45.60	Predicted protein (Fragment) n=1 Tax=Nematostella ...	[more]
A0A6P8IPB7_ACTTE	3.070e-61	43.32	exosome component 10-like n=2 Tax=Actinia tenebros...	[more]
UPI00139000DC	6.610e-61	45.60	exosome component 10 isoform X1 n=3 Tax=Nematostel...	[more]
UPI001E1DCEFC	6.610e-60	43.51	exosome component 10-like n=1 Tax=Mercenaria merce...	[more]
A0A7S1C3K2_9STRA	3.530e-58	42.81	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A5D6Y008_9STRA	3.690e-57	42.90	HRDC domain-containing protein n=1 Tax=Pythium bra...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig67195	contig	M-pyrifera_M_contig67195:227..1270 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Metazoa
Seed ortholog score	222.2
Seed ortholog evalue	3.5e-55
Seed eggNOG ortholog	45351.EDO33428
Preferred name	EXOSC10
KEGG ko	ko:K12591
KEGG Pathway	ko03018,map03018
Hectar predicted targeting category	other localisation
GOs	GO:0000175,GO:0000176,GO:0000178,GO:0000278,GO:0000460,GO:0000737,GO:0000785,GO:0000956,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005652,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006364,GO:0006378,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006810,GO:0006897,GO:0006909,GO:0006915,GO:0006921,GO:0006950,GO:0006952,GO:0007049,GO:0007059,GO:0007275,GO:0007549,GO:0008150,GO:0008152,GO:0008219,GO:0008298,GO:0008334,GO:0008408,GO:0009048,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010639,GO:0012501,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0016192,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019219,GO:0019222,GO:0019439,GO:0022411,GO:0022613,GO:0030262,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032204,GO:0032205,GO:0032210,GO:0032211,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0034399,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0035327,GO:0040029,GO:0042254,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043277,GO:0043631,GO:0043632,GO:0043633,GO:0043634,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051607,GO:0051641,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070034,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071030,GO:0071033,GO:0071034,GO:0071035,GO:0071043,GO:0071044,GO:0071046,GO:0071048,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097194,GO:0098542,GO:0098657,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1904356,GO:1904357,GO:1904872,GO:1905354,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2001251
EggNOG free text desc.	exosome component 10
EggNOG OGs	38D24@33154,3BK12@33208,COG0349@1,KOG2206@2759
COG Functional cat.	J
Best tax level	Metazoa
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03019
Exons	2
Model size	987
Cds size	987
Stop	0
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816562.360888-CDS-M-pyrifera_M_contig67195:226..338	1622816562.360888-CDS-M-pyrifera_M_contig67195:226..338	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig67195 227..338 +
1692278048.1591055-CDS-M-pyrifera_M_contig67195:226..338	1692278048.1591055-CDS-M-pyrifera_M_contig67195:226..338	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig67195 227..338 +
1622816562.3728418-CDS-M-pyrifera_M_contig67195:395..1270	1622816562.3728418-CDS-M-pyrifera_M_contig67195:395..1270	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig67195 396..1270 +
1692278048.1728249-CDS-M-pyrifera_M_contig67195:395..1270	1692278048.1728249-CDS-M-pyrifera_M_contig67195:395..1270	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig67195 396..1270 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig67195.16253.1	prot_M-pyrifera_M_contig67195.16253.1	Macrocystis pyrifera P11B4 male	polypeptide	M-pyrifera_M_contig67195 227..1270 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at M-pyrifera_M_contig67195:227..1270+
coding sequence from alignment at M-pyrifera_M_contig67195:227..1270+

protein sequence of mRNA_M-pyrifera_M_contig67195.16253.1

>prot_M-pyrifera_M_contig67195.16253.1 ID=prot_M-pyrifera_M_contig67195.16253.1|Name=mRNA_M-pyrifera_M_contig67195.16253.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=329bp
MPTLPPTPVLLSTKAVTLVNTSEQLEALVQHLRTGGGVREFAFDLEAHSE
HSFQGITCLMQLSTRWHTFLVDTLELRSELKCLNEFFADPEIVKVGHGCD
RDVLWLQRCFGIFIVRLFDTGQAARVLSLPKFSLAYLLSVYAAVNPDKSL
QLADWRRRREGDVWIAPNLLRYAVEDTYYLLPIYDRLRNELLDATIASTT
PSSSSSSSSSASSSSSSSSPPSSPSSPPNLLEEVWRRSHGLCCRVYEKPR
LTSATARTLAARLDVRTRQQLMAVDGEGRALRGRAFAALVWWRDRIGRLV
DEAAETVLPKRAMVRIAVALPQDSAALRA

mRNA from alignment at M-pyrifera_M_contig67195:227..1270+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_M-pyrifera_M_contig67195.16253.1 ID=mRNA_M-pyrifera_M_contig67195.16253.1|Name=mRNA_M-pyrifera_M_contig67195.16253.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig67195:227..1270+ (Macrocystis pyrifera P11B4 male)
ATGCCCACTCTCCCACCCACCCCAGTGCTCCTCTCCACCAAGGCAGTCAC
CCTCGTGAACACCTCGGAGCAACTCGAAGCACTCGTCCAACACCTTCGCA
CAGGAGGAGGAGGTGGAGGTGAGGGAGAAGGTGGAGGAGGAGGAGGAGGG
GAAATGGGGGGTGGGAAAGTGCGGGAATTTGCGTTTGACCTGGAAGCACA
CTCAGAGCACTCGTTCCAAGGCATCACCTGCCTCATGCAGCTCAGCACAC
GATGGCACACTTTCTTGGTGGACACCCTCGAGCTTCGCTCCGAGCTCAAG
TGTCTGAATGAATTCTTCGCAGATCCGGAGATCGTCAAGGTGGGGCATGG
GTGTGACCGCGATGTGCTGTGGCTCCAACGCTGCTTTGGCATCTTCATCG
TGCGGCTCTTTGACACAGGACAGGCCGCGAGAGTCCTCTCTCTGCCCAAA
TTCAGCCTCGCATACCTCCTGTCCGTCTACGCAGCCGTCAACCCAGACAA
GTCTCTGCAACTCGCAGATTGGAGGCGCAGAAGAGAAGGGGACGTGTGGA
TCGCACCAAACTTACTCCGATACGCAGTCGAAGACACCTACTACCTCCTC
CCAATCTACGACAGACTCCGAAACGAACTACTCGATGCCACCATCGCATC
CACAACACCATCTTCGTCATCATCTTCATCATCATCAGCTTCATCATCAT
CATCATCATCCTCCCCACCTTCCTCACCTTCCTCCCCGCCCAACCTGTTG
GAGGAGGTGTGGCGGCGGTCGCACGGGCTGTGTTGCCGGGTGTATGAGAA
GCCTCGCCTGACCTCTGCGACCGCTCGCACCCTTGCTGCTCGGTTGGATG
TGCGCACGCGGCAGCAGCTGATGGCTGTGGATGGGGAAGGGAGAGCGTTG
CGTGGGAGGGCGTTTGCGGCGCTCGTGTGGTGGCGTGACCGCATTGGCAG
ACTTGTGGATGAAGCTGCAGAAACTGTTCTCCCAAAACGAGCCATGGTAC
GCATCGCTGTCGCACTGCCACAAGACTCTGCAGCACTCAGAGCT

Coding sequence (CDS) from alignment at M-pyrifera_M_contig67195:227..1270+

>mRNA_M-pyrifera_M_contig67195.16253.1 ID=mRNA_M-pyrifera_M_contig67195.16253.1|Name=mRNA_M-pyrifera_M_contig67195.16253.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1974bp|location=Sequence derived from alignment at M-pyrifera_M_contig67195:227..1270+ (Macrocystis pyrifera P11B4 male)
ATGCCCACTCTCCCACCCACCCCAGTGCTCCTCTCCACCAAGGCAGTCAC
CCTCGTGAACACCTCGGAGCAACTCGAAGCACTCGTCCAACACCTTCGCA
CAGGAGGAGGAGATGCCCACTCTCCCACCCACCCCAGTGCTCCTCTCCAC
CAAGGCAGTCACCCTCGTGAACACCTCGGAGCAACTCGAAGCACTCGTCC
AACACCTTCGCACAGGAGGAGGAGTGCGGGAATTTGCGTTTGACCTGGAA
GCACACTCAGAGCACTCGTTCCAAGGCATCACCTGCCTCATGCAGCTCAG
CACACGATGGCACACTTTCTTGGTGGACACCCTCGAGCTTCGCTCCGAGC
TCAAGTGTCTGAATGAATTCTTCGCAGATCCGGAGATCGTCAAGGTGGGG
CATGGGTGTGACCGCGATGTGCTGTGGCTCCAACGCTGCTTTGGCATCTT
CATCGTGCGGCTCTTTGACACAGGACAGGCCGCGAGAGTCCTCTCTCTGC
CCAAATTCAGCCTCGCATACCTCCTGTCCGTCTACGCAGCCGTCAACCCA
GACAAGTCTCTGCAACTCGCAGATTGGAGGCGCAGAAGAGAAGGGGACGT
GTGGATCGCACCAAACTTACTCCGATACGCAGTCGAAGACACCTACTACC
TCCTCCCAATCTACGACAGACTCCGAAACGAACTACTCGATGCCACCATC
GCATCCACAACACCATCTTCGTCATCATCTTCATCATCATCAGCTTCATC
ATCATCATCATCATCCTCCCCACCTTCCTCACCTTCCTCCCCGCCCAACC
TGTTGGAGGAGGTGTGGCGGCGGTCGCACGGGCTGTGTTGCCGGGTGTAT
GAGAAGCCTCGCCTGACCTCTGCGACCGCTCGCACCCTTGCTGCTCGGTT
GGATGTGCGCACGCGGCAGCAGCTGATGGCTGTGGATGGGGAAGGGAGAG
CGTTGCGTGGGAGGGCGTTTGCGGCGCTCGTGTGGTGGCGTGACCGCATT
GGCAGACTTGTGGATGAAGCTGCAGAAACTGTTCTCCCAAAACGAGCCAT
GGTACGCATCGCTGTCGCACTGCCACAAGACTCTGCAGCACTCAGAGCTT
GCGGGAATTTGCGTTTGACCTGGAAGCACACTCAGAGCACTCGTTCCAAG
GCATCACCTGCCTCATGCAGCTCAGCACACGATGGCACACTTTCTTGGTG
GACACCCTCGAGCTTCGCTCCGAGCTCAAGTGTCTGAATGAATTCTTCGC
AGATCCGGAGATCGTCAAGGTGGGGCATGGGTGTGACCGCGATGTGCTGT
GGCTCCAACGCTGCTTTGGCATCTTCATCGTGCGGCTCTTTGACACAGGA
CAGGCCGCGAGAGTCCTCTCTCTGCCCAAATTCAGCCTCGCATACCTCCT
GTCCGTCTACGCAGCCGTCAACCCAGACAAGTCTCTGCAACTCGCAGATT
GGAGGCGCAGAAGAGAAGGGGACGTGTGGATCGCACCAAACTTACTCCGA
TACGCAGTCGAAGACACCTACTACCTCCTCCCAATCTACGACAGACTCCG
AAACGAACTACTCGATGCCACCATCGCATCCACAACACCATCTTCGTCAT
CATCTTCATCATCATCAGCTTCATCATCATCATCATCATCCTCCCCACCT
TCCTCACCTTCCTCCCCGCCCAACCTGTTGGAGGAGGTGTGGCGGCGGTC
GCACGGGCTGTGTTGCCGGGTGTATGAGAAGCCTCGCCTGACCTCTGCGA
CCGCTCGCACCCTTGCTGCTCGGTTGGATGTGCGCACGCGGCAGCAGCTG
ATGGCTGTGGATGGGGAAGGGAGAGCGTTGCGTGGGAGGGCGTTTGCGGC
GCTCGTGTGGTGGCGTGACCGCATTGGCAGACTTGTGGATGAAGCTGCAG
AAACTGTTCTCCCAAAACGAGCCATGGTACGCATCGCTGTCGCACTGCCA
CAAGACTCTGCAGCACTCAGAGCT