mRNA_M-pyrifera_M_contig67191.16252.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67191.16252.1
Unique NamemRNA_M-pyrifera_M_contig67191.16252.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A0L0HFN4_SPIPD (Abhydrolase_2 domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HFN4_SPIPD)

HSP 1 Score: 191 bits (484), Expect = 6.970e-58
Identity = 95/203 (46.80%), Postives = 127/203 (62.56%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            LHGLGD+GNGW  V +MLQP LPH++WV P AP++PV+IN GM MPAWYDI  LG    +   GV ++   +   + +E+  GI ++RI++GGFSQGAA S+      + +LAG   LSGYLP          + NK TP+LMCHGDAD VV  +W K  + KL E   L     FK YRG+ H +   E++D+A F+ + LP
Sbjct:   25 LHGLGDSGNGWAPVAKMLQPLLPHVKWVLPHAPQKPVSINFGMAMPAWYDIHHLGPGGREDEAGVMDSVSKITELINDEIRSGISADRIVLGGFSQGAAVSIVYSLTSNTRLAGFTCLSGYLPLTTNIDKLTNSTNKGTPMLMCHGDADEVVAYQWGKMTYDKLKE---LDRKVEFKTYRGMGHSSSNDEVKDVAEFLKELLP 224          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A8K1CEC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEC7_PYTOL)

HSP 1 Score: 183 bits (465), Expect = 6.260e-55
Identity = 97/203 (47.78%), Postives = 129/203 (63.55%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            +HGLGDT +GW D   ML   LPHI+++ PTA  +PVT+N GM MP+WYDIK L        DG+EE++E L   + +E+  GIP  RI++GGFSQG A SLF+ FQ+   LAGV  LSGY+P       AVT E  + PLLMCHGD D VV+ EW + + AKL E   + +   F+VY G+ H A M+E+ D+  ++   LP
Sbjct:   26 VHGLGDTAHGWADAMGMLSKDLPHIKFILPTAKSQPVTLNMGMRMPSWYDIKSLTKTEGDDADGIEESRERLLGIIEKEVEGGIPHSRIVLGGFSQGGAMSLFTGFQIKTVLAGVLCLSGYIPKMGSY--AVTPETVNVPLLMCHGDQDPVVRFEWGQQSKAKL-ESAGVKNIE-FRVYPGMQHSACMEEIDDIKRWLGRVLP 224          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A0G4J559_PLABS (Abhydrolase_2 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J559_PLABS)

HSP 1 Score: 184 bits (467), Expect = 9.660e-55
Identity = 98/204 (48.04%), Postives = 128/204 (62.75%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADK-AVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            LHGLGDT  GW      LQ ++PH+R V PTAP  PVT+NGGM M +W+DI  L S  ++ + G+EE+   +   + +E+ RGIPS RI++GGFSQGAA SL+S  Q    LAG+ ++SGYLPH    A A ++A NK TP+L+CHG AD VV     K  H  LS       P+ FK Y GL HGA+ QEL D+  F+   +P
Sbjct:   66 LHGLGDTSAGWAGEFRNLQRSMPHVRMVLPTAPISPVTLNGGMRMTSWHDIHSLQSIDSEKMAGLEESFAAIHELIDDEVKRGIPSNRIVIGGFSQGAALSLYSGLQYKSPLAGIISMSGYLPHYQTFATAKLSAANKQTPVLVCHGQADPVVHFVAGKTTHEILSRA---GVPAQFKQYPGLGHGANAQELNDVREFVTKAIP 266          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A2D4BUL8_PYTIN (Abhydrolase_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUL8_PYTIN)

HSP 1 Score: 177 bits (450), Expect = 1.160e-52
Identity = 95/203 (46.80%), Postives = 126/203 (62.07%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            +HGLGDT +GW D  +ML   LPH+++V PTA  +PVT+N GM MP+WYDIK L         G+E +++ L   + +E+  GIP  RI++GGFSQG A SLF+ FQ+   LAGV  LSGY+P   KA A VT E K  PLLMCHG+ D VV+ +W K +  K+    S      F+VY    HGA M+EL D+  ++   LP
Sbjct:   27 VHGLGDTAHGWADAMQMLSKDLPHVKFVLPTAKSQPVTLNMGMRMPSWYDIKSLSKSDDDEAXGIEASRDRLVGLIEKEVAAGIPHSRIVLGGFSQGGAMSLFTGFQMKVALAGVLCLSGYIPKM-KAFA-VTPETKQVPLLMCHGEIDPVVQFQWGKLSKEKIES--SSVQXVEFRVYPDXEHGACMEELDDVKRWLTRVLP 225          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A1V9ZF70_9STRA (Acyl-protein thioesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZF70_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.300e-52
Identity = 91/203 (44.83%), Postives = 127/203 (62.56%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            +HGLGDT  GW D    L  ++PH++ + PTAP +PVT+N GM MP+WYDI+ L  R      G+E+++E +   +  E+  GIP+ RI++GGFSQG A SLF+ FQ+   LAGV  LSGY+P A     +V    K+ PLLMCHGD D VV+L WA+ +  K+ E+    +   FKVY  L HGA M+E+  +  ++   LP
Sbjct:   36 MHGLGDTAFGWADTIHHLSQSMPHLKCILPTAPTQPVTLNNGMTMPSWYDIQSLTDREGDPCSGIEDSRERILGVINNEIQAGIPASRIVLGGFSQGGAMSLFTGFQMQHALAGVLVLSGYVPKAG--FFSVPTALKNVPLLMCHGDCDMVVRLSWAEKSIEKVKEQGV--ANVEFKVYENLDHGASMEEITKVQKWLEKILP 234          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A5D6XR29_9STRA (Abhydrolase_2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR29_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.950e-52
Identity = 92/205 (44.88%), Postives = 127/205 (61.95%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLPSQ 615
            +HGLGDT +GW D    L   LPH+++V PTA  +PVT+N GM MP+WYDIK L         G+EE++E++   + +E+  GIP  RI++GGFSQGAA S ++ +Q+   LAGV  LSGY+P       AVT E K  P L+CHGD+D VV+ +W + +  KL    S      F+VY G+ HG+ M+EL D+  F+   LP Q
Sbjct:   49 MHGLGDTAHGWSDAMVSLSKHLPHVKFVLPTASNKPVTLNMGMPMPSWYDIKTLAKTENDENAGIEESRELVLGLIEKEVAAGIPHSRIVLGGFSQGAAMSYYTGYQMKTALAGVLILSGYIPKMQ--AFAVTPEAKAVPALICHGDSDPVVRFQWGQMSMEKLQ---SAGVGLDFRVYSGMGHGSCMEELADIRGFLEKVLPLQ 248          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A507E173_9FUNG (Abhydrolase_2 domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E173_9FUNG)

HSP 1 Score: 176 bits (446), Expect = 4.000e-52
Identity = 93/205 (45.37%), Postives = 132/205 (64.39%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAA-TSLFSCFQLHQKLAGVAALSGYLPHADKAVAAV-TAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            LHGLGD+G+GW  V +MLQP LPH+++V P APERP+TIN G  MP WYDI+ LG    +  +GV  +   +   + +E+  GIP++RI++GGFSQG A T+++S    H KLAG+ ALS Y+P  +K +  +    NK+TP+ M HGDAD VV  +W K ++ K+ E      P  FK YRG+ H +  +E+ D+ AF+   LP
Sbjct:   24 LHGLGDSGHGWAPVAKMLQPLLPHVKFVLPHAPERPITINFGTKMPGWYDIQALGPGGKEDPEGVATSISQVSQLIEDEIKGGIPADRIVLGGFSQGGAVTNIYSLGGSH-KLAGLVALSSYVPLTEKRLEQIQNPTNKETPMFMGHGDADQVVAHKWGKMSYDKIVELGKKVEP--FKTYRGMGHSSSPEEISDVGAFLKKVLP 225          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A7S0L536_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L536_9EUKA)

HSP 1 Score: 176 bits (447), Expect = 7.930e-52
Identity = 93/203 (45.81%), Postives = 128/203 (63.05%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            +HGLGDT  GW DV  +L   L HI++V P AP  PVT+NGGM MP+WYDI  L  +  Q   G+ +++  ++  +AEE+  GIP +RI+VGGFSQG A SL++  Q   +LAGV  LSGYL  A+K   A  A N  TP+   HG  D VV ++WA+++ AK+  +L   S    K Y  L H A M+E+ D+ A++A+RLP
Sbjct:   57 IHGLGDTNRGWLDVASLLHTRLSHIKFVLPNAPTSPVTLNGGMQMPSWYDITSLDDKLGQPCTGIADSRATIDQLIAEEVASGIPLDRIVVGGFSQGGAMSLYAGLQYPGQLAGVLVLSGYLAAAEKFALAPEAAN--TPVAHFHGADDPVVNVQWARES-AKMLRELGC-SHYTLKEYESLGHSASMEEIADVEAWLAERLP 255          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A167REW0_PHYB8 (Abhydrolase_2 domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167REW0_PHYB8)

HSP 1 Score: 174 bits (442), Expect = 1.610e-51
Identity = 88/206 (42.72%), Postives = 126/206 (61.17%), Query Frame = 1
Query:    1 LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQA--LDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLPS 612
            +HGLGD+G GW  + E L    P+++W+ P AP  PVT+NGGM MPAW+DIKELG + A +   DG+ ++   +   L +E+ +GIP+ RI++GGFSQG+  SL +      KLA +   SG+LP  D+     +  NK TP+LMCHGDAD VV   + K++  +L +   L     FK Y  L H A  QEL D+++F+   +PS
Sbjct:   22 MHGLGDSGAGWSFLAEQLSGLFPYVKWILPNAPSIPVTLNGGMSMPAWFDIKELGRKNATSEDRDGMLQSVTTINKILRDEVDKGIPANRIVLGGFSQGSVMSLLAGLTSEYKLAAIIGCSGWLPMPDRIQNMASDANKKTPILMCHGDADPVVNYTFGKESAERLQQ---LKYDVEFKTYHNLGHSAAPQELLDISSFLKKNIPS 224          
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Match: A0A1C7NFW9_9FUNG (Acyl-protein thioesterase 1 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NFW9_9FUNG)

HSP 1 Score: 174 bits (441), Expect = 2.210e-51
Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 1
Query:    4 HGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYDIKELGSRAAQALD--GVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAATSLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADAVVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIADRLP 609
            HGLGD+G GW  +GE L    P+++WV P AP RP+ +NGG  MP W+D+  L  R  +  D  G+  +   +   + EE+ +GIP+ERII+GGFSQGA  SL +     QKLAG+ A SG+L  + K     +  NK TP+LMCHGD D VV+ E+ +++  KL    SL    +FK Y GL H A+ QEL D+A FI   +P
Sbjct:   22 HGLGDSGAGWSFIGEELGQLFPYVKWVLPNAPARPIALNGGFPMPGWFDLHSLDKRILENEDEKGIMASSASIGQLIQEEINQGIPAERIILGGFSQGACLSLVTGLSSQQKLAGIIACSGWLGLSSKFANIASETNKQTPILMCHGDRDPVVRYEYGQESADKLR---SLGYQISFKAYPGLVHSANEQELADIAQFIKKVIP 222          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67191.16252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0HFN4_SPIPD6.970e-5846.80Abhydrolase_2 domain-containing protein n=2 Tax=Sp... [more]
A0A8K1CEC7_PYTOL6.260e-5547.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0G4J559_PLABS9.660e-5548.04Abhydrolase_2 domain-containing protein n=1 Tax=Pl... [more]
A0A2D4BUL8_PYTIN1.160e-5246.80Abhydrolase_2 domain-containing protein n=1 Tax=Py... [more]
A0A1V9ZF70_9STRA1.300e-5244.83Acyl-protein thioesterase n=1 Tax=Thraustotheca cl... [more]
A0A5D6XR29_9STRA3.950e-5244.88Abhydrolase_2 domain-containing protein n=1 Tax=Py... [more]
A0A507E173_9FUNG4.000e-5245.37Abhydrolase_2 domain-containing protein n=1 Tax=Po... [more]
A0A7S0L536_9EUKA7.930e-5245.81Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A167REW0_PHYB81.610e-5142.72Abhydrolase_2 domain-containing protein n=1 Tax=Ph... [more]
A0A1C7NFW9_9FUNG2.210e-5144.61Acyl-protein thioesterase 1 n=1 Tax=Choanephora cu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67191contigM-pyrifera_M_contig67191:2..697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score193.7
Seed ortholog evalue8.3e-47
Seed eggNOG ortholog109760.SPPG_05114T0
KEGG rclassRC00020,RC00037,RC00041,RC00094
KEGG koko:K06128,ko:K06130,ko:K06999
KEGG ReactionR02746,R02747,R03416,R03417
KEGG Pathwayko00564,ko05231,map00564,map05231
Hectar predicted targeting categoryother localisation
GOsGO:0002084,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008474,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030163,GO:0035601,GO:0036211,GO:0042157,GO:0042159,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0052689,GO:0071704,GO:0098599,GO:0098732,GO:0098734,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.Acyl-protein thioesterase 1
EggNOG OGs38RN5@33154,3NZH9@4751,COG0400@1,KOG2112@2759
EC3.1.1.5
COG Functional cat.I
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size618
Cds size618
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816562.3186624-CDS-M-pyrifera_M_contig67191:1..961622816562.3186624-CDS-M-pyrifera_M_contig67191:1..96Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67191 2..96 +
1692278048.1389768-CDS-M-pyrifera_M_contig67191:1..961692278048.1389768-CDS-M-pyrifera_M_contig67191:1..96Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67191 2..96 +
1622816562.32949-CDS-M-pyrifera_M_contig67191:174..6971622816562.32949-CDS-M-pyrifera_M_contig67191:174..697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67191 175..697 +
1692278048.1499498-CDS-M-pyrifera_M_contig67191:174..6971692278048.1499498-CDS-M-pyrifera_M_contig67191:174..697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67191 175..697 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67191.16252.1prot_M-pyrifera_M_contig67191.16252.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67191 2..697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67191.16252.1

>prot_M-pyrifera_M_contig67191.16252.1 ID=prot_M-pyrifera_M_contig67191.16252.1|Name=mRNA_M-pyrifera_M_contig67191.16252.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
LHGLGDTGNGWKDVGEMLQPTLPHIRWVFPTAPERPVTINGGMMMPAWYD
IKELGSRAAQALDGVEEAKEMLENHLAEEMGRGIPSERIIVGGFSQGAAT
SLFSCFQLHQKLAGVAALSGYLPHADKAVAAVTAENKDTPLLMCHGDADA
VVKLEWAKDAHAKLSEKLSLPSPSAFKVYRGLAHGADMQELRDLAAFIAD
RLPSQ*
back to top

mRNA from alignment at M-pyrifera_M_contig67191:2..697+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67191.16252.1 ID=mRNA_M-pyrifera_M_contig67191.16252.1|Name=mRNA_M-pyrifera_M_contig67191.16252.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig67191:2..697+ (Macrocystis pyrifera P11B4 male)
CTGCATGGCCTTGGAGACACAGGAAATGGCTGGAAGGACGTCGGAGAGAT GCTCCAGCCCACTCTCCCGCACATCCGCTGGGTCTTCCCCACTGCGTACG TCTACTCGTTCCGCTTCTACCTGCTGGCTGGGCCGGAGAGCCAACCTATC CATACTGACGTCTGCATGTGAAGCCCAGAGAGGCCAGTGACCATCAACGG TGGCATGATGATGCCAGCCTGGTACGACATCAAGGAGCTCGGCAGCAGGG CTGCCCAGGCGTTGGACGGAGTGGAGGAGGCGAAGGAGATGCTGGAGAAC CACCTGGCGGAGGAGATGGGCCGGGGCATCCCCTCCGAGCGCATCATTGT CGGTGGCTTCTCTCAGGGAGCTGCGACGAGCCTCTTCTCTTGCTTCCAGC TCCACCAGAAGCTGGCTGGCGTTGCCGCGCTCAGTGGATACCTGCCACAT GCTGACAAGGCTGTGGCTGCTGTCACTGCAGAGAACAAGGACACGCCCTT GCTCATGTGCCATGGCGATGCCGATGCAGTTGTCAAGCTGGAATGGGCCA AGGACGCGCACGCAAAGCTCTCGGAAAAGCTCTCTCTTCCCAGCCCCTCT GCCTTCAAGGTCTACCGTGGCCTTGCCCATGGTGCTGACATGCAGGAGCT GCGAGACCTGGCTGCATTCATTGCCGACCGCCTTCCCTCTCAGTAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig67191:2..697+

>mRNA_M-pyrifera_M_contig67191.16252.1 ID=mRNA_M-pyrifera_M_contig67191.16252.1|Name=mRNA_M-pyrifera_M_contig67191.16252.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig67191:2..697+ (Macrocystis pyrifera P11B4 male)
CTGCATGGCCTTGGAGACACAGGAAATGGCTGGAAGGACGTCGGAGAGAT
GCTCCAGCCCACTCTCCCGCACATCCGCTGGGTCTTCCCCACTGCCTGCA
TGGCCTTGGAGACACAGGAAATGGCTGGAAGGACGTCGGAGAGATGCTCC
AGCCCACTCTCCCGCACATCCGCTGGGTCTTCCCCACTGCCCCAGAGAGG
CCAGTGACCATCAACGGTGGCATGATGATGCCAGCCTGGTACGACATCAA
GGAGCTCGGCAGCAGGGCTGCCCAGGCGTTGGACGGAGTGGAGGAGGCGA
AGGAGATGCTGGAGAACCACCTGGCGGAGGAGATGGGCCGGGGCATCCCC
TCCGAGCGCATCATTGTCGGTGGCTTCTCTCAGGGAGCTGCGACGAGCCT
CTTCTCTTGCTTCCAGCTCCACCAGAAGCTGGCTGGCGTTGCCGCGCTCA
GTGGATACCTGCCACATGCTGACAAGGCTGTGGCTGCTGTCACTGCAGAG
AACAAGGACACGCCCTTGCTCATGTGCCATGGCGATGCCGATGCAGTTGT
CAAGCTGGAATGGGCCAAGGACGCGCACGCAAAGCTCTCGGAAAAGCTCT
CTCTTCCCAGCCCCTCTGCCTTCAAGGTCTACCGTGGCCTTGCCCATGGT
GCTGACATGCAGGAGCTGCGAGACCTGGCTGCATTCATTGCCGACCGCCT
TCCCTCTCAGTAACCCAGAGAGGCCAGTGACCATCAACGGTGGCATGATG
ATGCCAGCCTGGTACGACATCAAGGAGCTCGGCAGCAGGGCTGCCCAGGC
GTTGGACGGAGTGGAGGAGGCGAAGGAGATGCTGGAGAACCACCTGGCGG
AGGAGATGGGCCGGGGCATCCCCTCCGAGCGCATCATTGTCGGTGGCTTC
TCTCAGGGAGCTGCGACGAGCCTCTTCTCTTGCTTCCAGCTCCACCAGAA
GCTGGCTGGCGTTGCCGCGCTCAGTGGATACCTGCCACATGCTGACAAGG
CTGTGGCTGCTGTCACTGCAGAGAACAAGGACACGCCCTTGCTCATGTGC
CATGGCGATGCCGATGCAGTTGTCAAGCTGGAATGGGCCAAGGACGCGCA
CGCAAAGCTCTCGGAAAAGCTCTCTCTTCCCAGCCCCTCTGCCTTCAAGG
TCTACCGTGGCCTTGCCCATGGTGCTGACATGCAGGAGCTGCGAGACCTG
GCTGCATTCATTGCCGACCGCCTTCCCTCTCAGTAA
back to top