mRNA_M-pyrifera_M_contig67072.16231.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67072.16231.1
Unique NamemRNA_M-pyrifera_M_contig67072.16231.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: A0A812M8T8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812M8T8_9DINO)

HSP 1 Score: 187 bits (475), Expect = 2.660e-48
Identity = 149/406 (36.70%), Postives = 225/406 (55.42%), Query Frame = 1
Query:    4 GRVLVRGGLGVSKGGSVLVASGA--GKRLGS------GNITLRSE-----QGRSTGHITLQTGDAQWDEAGSVHLIAGASLRNSTAV---RGGHVQVSAGASRG------GMGGDLSLSAG--DGRSG--GNVVVKGGSGV---------GGRSF---GGDIILTPGSAA-----LGTFTNTEAMARQRRGALKLQDA------GGEDRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSS 1074
            G V++RGG G  +GG V +A+GA  G R+G+      G     SE     Q  S GH+ L +G  Q  EA S    +GA +  + +V   +G H + S  AS        G+ GDL L  G   G++G  G+V + GG  V         GG S    G  + +  GS A     +   +    +A + + AL    +      G    LL+  +GS   S+A     ++   D+  + V +  G+  EL+  H D  + G+   R R +K++ HVPL +VEV++PSD RIKRD+  +D  +L  ++  L + +Y+Y+D WRKVRGI+DIEVRGVIAQEV +V PEYI++T ++ F E  F ++NFHEV+KIK+++DLLAAFQ+H++RF+    + +++GSV V+S
Sbjct: 2209 GTVMIRGGDGW-QGGKVSIAAGASRGGRMGASVLIRAGKAFPSSESDSVGQAASGGHLQLVSGALQVPEARSA---SGAFVSGNVSVSSAQGAHRESSGAASMASGSVIDGIAGDLLLLGGGASGQAGTAGSVRLAGGDAVRKXXGVSIEGGSSVDSQGASVTVRAGSGANHSGAVNILSPASDLATEAKLALDSSSSKASLSLGSGPELLLGASGSTFRSSAAGTSFSLQGSDSNTAAVSVSSGAANELQVLHGDATTTGNVVFRARADKVFSHVPLDAVEVISPSDVRIKRDLASVDGLDLLHKLQRLTVKRYRYSDAWRKVRGIEDIEVRGVIAQEVYKVMPEYISITDQVNFPEANFSMDNFHEVDKIKMSVDLLAAFQAHHKRFTIAEATGTATGSVSVTS 2610          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: G4ZCG7_PHYSP (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCG7_PHYSP)

HSP 1 Score: 175 bits (443), Expect = 1.790e-46
Identity = 105/267 (39.33%), Postives = 157/267 (58.80%), Query Frame = 1
Query:  352 GRSFGGDIILTPGSAALGTFTNTEAMARQRRGALKLQDA-GGEDRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSSQSAGSRAFTGATPVSDSGSVLVASG 1149
            G + GG+I +  G+A+  T +      +   G + +         + VS +GSVS+ A  +  + I      G  + I V +GE L   H +TK  G    RL+ +KM  HVP    E+  PSD+RIK DI D+DED++ QR+ +L + KY+Y++ WR++RGI D+ VRGVIAQ+V E FPEY+TV+  L   E  F LE FHEVNK +I +DL+AA  + ++RF  GP+S + SG + +++  AGS  +  A+P   SG V + +G
Sbjct:   80 GSTHGGNIDIVSGAASAPTGSGGHVTLKSGGGDIVVSGTDAAASHMSVSGDGSVSVKADTSSSMEI----RGGDSLNISVQTGE-LTVSHGETKVPGGVIWRLQPDKMISHVPAQITEITYPSDRRIKTDIEDVDEDDILQRIQTLEVKKYRYSEMWREIRGIPDVTVRGVIAQQVEETFPEYVTVST-LTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEAQSGRIDIATADAGS--YVNASPTGSSGDVSIETG 338          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: D0MTD8_PHYIT (Peptidase S74 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MTD8_PHYIT)

HSP 1 Score: 173 bits (438), Expect = 2.760e-46
Identity = 113/290 (38.97%), Postives = 163/290 (56.21%), Query Frame = 1
Query:  274 GGDLSLSAGDGRS-GGNVVVKGGSGVGGRSFGGDIILTPGSAALGTFTNTEAMARQRRGALKLQDAGGEDRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSSQSAGSRAFTGATPVSDSGSVLV 1140
            GG ++L +G G + GGN  +  G+   G   GG + L  G   +   + T A A                 + V+ +GS+ + AA    + I      G+ + I V +GE L   H +T   G    RL+  KM  HVP    EV  PSD+RIK DI DIDED++ QR+ +L + KY+Y++ WR++RGI D+ VRGVIAQ+V E FPEY+T++  L   E  F LE FHEVNK +I +DL+AA  + +RRF  GP+S + SG + +++  AGS  +T A+P   SG + V
Sbjct:   11 GGGITLVSGKGSTQGGNSEIASGTASAGDGIGGRLALKSGGGDV-VVSGTNATA---------------SHMSVTSDGSIRVKAAATSSLEI----RGGNNMNISVDTGE-LTVSHGETTVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIPDVTVRGVIAQQVEETFPEYVTIST-LTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHRRFKVGPNSEAQSGRIDIATADAGS--YTNASPTGSSGDISV 276          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: A0A329SQ29_9STRA (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SQ29_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.340e-44
Identity = 106/267 (39.70%), Postives = 155/267 (58.05%), Query Frame = 1
Query:  352 GRSFGGDIILTPGSAALGTFTNTEAMARQRRGALKLQDAGGE-DRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSSQSAGSRAFTGATPVSDSGSVLVASG 1149
            G + GGDI +  G+A+  T T      +   G + +         + VS +GS+ + AA    + I      G+ + I V +GE L   H +T   G    RL+  KM  HVP    EV  PSD+RIK DI DIDED++ QR+ +L + KY+Y++ WR++RGI D+ VRGVIAQ+V E FPEY+T++  L   E  F LE FHEVNK +I +DL+AA  + ++RF  GP+S   SG + +++  AGS  +T A+P   SG + + +G
Sbjct: 3066 GSTQGGDIEIASGTASAATGTGGRLALKSGGGNVVISGTNATASHMSVSGDGSIKMKAATTSSMEI----RGGNNMNISVDTGE-LTVSHGETAVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIPDVSVRGVIAQQVEETFPEYVTIST-LTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEVQSGRIDIATADAGS--YTNASPTGSSGDISIETG 3324          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: W2Q547_PHYPN (Peptidase S74 domain-containing protein n=13 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q547_PHYPN)

HSP 1 Score: 174 bits (442), Expect = 6.080e-44
Identity = 110/279 (39.43%), Postives = 157/279 (56.27%), Query Frame = 1
Query:  358 SFGGDIILTPGSAA-----LGTFTNTEAMARQRRGALKLQDAGGE----------DRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSSQSAGSRAFTGATPVSDSGSVLVASG 1149
            S GGDIIL  G  +     +   + T + A    G L L+  GG+            + VS +GS+ + AA    + I      G+ + I V +GE L   H +T   G    RL+  KM  HVP    EV  PSD+RIK DI DIDED++ QR+ +L + KY+Y+  WR++RGI D+ VRGVIAQ+V E FPEY+T++  L   E  F LE FHEVNK +I +DL+AA  + ++RF  GP+S + SG + +++   GS  +  A+P   SG + + SG
Sbjct: 3072 SSGGDIILASGKGSTQXXNIEIASGTASAAAGTGGHLALKSGGGDVVVSGMNVTASHMSVSGDGSIRVKAATTSTMEI----RGGNNMNISVDTGE-LTVSHGETTVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIQDIDEDDILQRIQTLEVKKYRYSKMWREIRGIPDVTVRGVIAQQVEETFPEYVTIST-LSLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSETQSGRIDIATADGGS--YANASPTGSSGDISIESG 3342          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: A0A833WMN7_PHYIN (Chaperone of endosialidase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WMN7_PHYIN)

HSP 1 Score: 173 bits (439), Expect = 1.480e-43
Identity = 108/273 (39.56%), Postives = 156/273 (57.14%), Query Frame = 1
Query:  352 GRSFGGDIILTPGSAALGTFTNTEAMARQRRGALKLQDAGGE----------DRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSSQSAGSRAFTGATPVSDSGSVLV 1140
            G + GG+I +  G+A+ G             G L L+  GG+            + V+ +GS+ + AA    + I      G+ + I V +GE L   H +T   G    RL+  KM  HVP    EV  PSD+RIK DI DIDED++ QR+ +L + KY+Y++ WR++RGI D+ VRGVIAQ+V E FPEY+T++  L   E  F LE FHEVNK +I +DL+AA  + +RRF  GP+S + SG + +++  AGS  +T A+P   SG + V
Sbjct: 3080 GSTQGGNIEIASGTASAGDGIG---------GRLALKSGGGDVVVSGTNATASHMSVTSDGSIRVKAAATSSLEI----RGGNNMNISVDTGE-LTVSHGETTVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIPDVTVRGVIAQQVEETFPEYVTIST-LTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHRRFKVGPNSEAQSGRIDIATADAGS--YTNASPTGSSGDISV 3335          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: A0A2D4CB88_PYTIN (Peptidase S74 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB88_PYTIN)

HSP 1 Score: 159 bits (402), Expect = 9.790e-42
Identity = 99/234 (42.31%), Postives = 139/234 (59.40%), Query Frame = 1
Query:  322 VVVKGGSGVGGRSFGGDIILTPGSAALGTFTNTEAMARQRRGALKLQDAGGEDRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRF 1023
            V V  GSG    + GGDI L  G+ + G  T           ++ ++D  G   + +   GSVSI+A+    + I     AG  + + + SGE +   H  T   G T  RL+ +KM  HVP    EV  PSD+RIK DI D+DEDE+ QRM  L + +Y+Y+++WR++RGI D++VRGVIAQ+V E+FPEY+TV+      E  F  + FHEVNK +IALDL+AAF + +RRF
Sbjct:   44 VSVVAGSG----ARGGDISLLGGNGSGGKIT---IATNASDSSIDIKDINGGG-VRIDGQGSVSIAASSTAAMRID----AGDNLNVSLQSGE-MAVSHAQTSVPGHTVWRLQSDKMVTHVPAQFTEVTYPSDRRIKTDIKDVDEDEILQRMQKLEIKQYRYSEKWREIRGIGDVQVRGVIAQQVGEIFPEYVTVSN-FTLPEKNFTFQXFHEVNKQQIALDLVAAFHAQHRRF 263          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: A0A0P1AVT1_PLAHL (Uncharacterized conserved protein (Fragment) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVT1_PLAHL)

HSP 1 Score: 168 bits (425), Expect = 1.080e-41
Identity = 94/212 (44.34%), Postives = 134/212 (63.21%), Query Frame = 1
Query:  565 GSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSSQSAGSRAF-------------TGATPVSDSGSVLVASGDVEA 1161
            GS + I VGSGE L   H ++   G+   RL+ +KM  H+P    EV+ PSD+RIK +I DIDED++ QR+ +L + KY+Y++ WR +RGI D+ VRGVIAQ+V E FPEY+T++      E  F LE FHEVNK +I +DL+AA  + +RRF  GP+S   SG + +++  AGS A              TG++ +S SG V++ASG+  A
Sbjct: 3147 GSNMNISVGSGE-LTVSHGESTVPGEVIWRLQPKKMISHIPAQMTEVIYPSDRRIKTNIEDIDEDDILQRLQTLEVKKYRYSEMWRGIRGISDVAVRGVIAQQVEETFPEYVTISN-FTLPEKNFSLEQFHEVNKQQITIDLIAAIHAQHRRFKVGPNSKEESGRIDIATADAGSYAAASPRGSSGSINIGTGSSSLSKSGDVVIASGEAHA 3356          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: A0A8K1FDS2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDS2_PYTOL)

HSP 1 Score: 167 bits (424), Expect = 1.520e-41
Identity = 112/288 (38.89%), Postives = 162/288 (56.25%), Query Frame = 1
Query:  328 VKGGSGVGGRSFGGDIILTPGSAALGTFTNTEAMARQRRGALKLQDAGGEDRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSSSGSVKVSSQSAGS-------------RAFTGATPVSDSGSVLVASGD 1152
            +KGG G G  +  G + L P S  +              GA+ + D      + VS +GSV I    +  + I    A G+ + I V SGE L   H+ T   G    R++  K   HVP    EV+ PSD+RIK DI D+DEDE+ QR+ +L + +Y+Y++ WR++RGI D+ VRGVIAQ+V   FPEY++V+K     E  F LE FHEVNK ++++DL+AA  + +RRF  G ++P++SG+V V++  AG+             R  TGA+    SG VL+ASGD
Sbjct: 1839 LKGGHG-GDVNIAGGVGLGPDSTGVXXXXXXXXXXXXXXGAVIVGDKAS-GMVAVSGDGSVGIKTGNSSTMEI----AGGNNLNISVQSGE-LSVSHEQTPVPGKIVWRIQSNKTITHVPAQFTEVIYPSDRRIKTDIEDVDEDEILQRLQTLEIKQYRYSELWREIRGIPDVPVRGVIAQQVGATFPEYVSVSK-FELPEKNFVLEQFHEVNKQQMSIDLIAAMHAQHRRFKVGANAPTTSGNVDVTTADAGAYVNAAPNGDSGRLRVQTGASSAGSSGDVLLASGD 2118          
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Match: A0A5A8EBR6_CAFRO (Peptidase S74 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBR6_CAFRO)

HSP 1 Score: 165 bits (418), Expect = 8.690e-41
Identity = 91/180 (50.56%), Postives = 119/180 (66.11%), Query Frame = 1
Query:  571 GVRIQVGSGEELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDIDEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYITVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHS------PSSSGSVKVSSQSAGSR 1092
            G R     G E  F H    S G   +R+R +K++ HVP  +VEV+ PSD+RIKR+I  I ED +  R+  LR+ +Y+YTD WRKVRGI+D EVRGVIAQEV+EV PEYIT+T++L   E  F +E+FHEVNKI+IA+DLLAA Q+   RF+ G         P+S+  V VSS   GS+
Sbjct: 3158 GYRFGAYEGAEATFTHNQAASEGGVVMRVRPDKIFSHVPFDAVEVITPSDRRIKRNIRGISEDSILHRLQRLRVRRYRYTDAWRKVRGIEDREVRGVIAQEVQEVMPEYITITEKLTLPEQNFTIEDFHEVNKIRIAVDLLAAVQAQFARFNFGELQQENGTLPASTAFVSVSSADGGSQ 3337          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67072.16231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812M8T8_9DINO2.660e-4836.70Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
G4ZCG7_PHYSP1.790e-4639.33Peptidase S74 domain-containing protein (Fragment)... [more]
D0MTD8_PHYIT2.760e-4638.97Peptidase S74 domain-containing protein n=1 Tax=Ph... [more]
A0A329SQ29_9STRA1.340e-4439.70Peptidase S74 domain-containing protein (Fragment)... [more]
W2Q547_PHYPN6.080e-4439.43Peptidase S74 domain-containing protein n=13 Tax=P... [more]
A0A833WMN7_PHYIN1.480e-4339.56Chaperone of endosialidase n=1 Tax=Phytophthora in... [more]
A0A2D4CB88_PYTIN9.790e-4242.31Peptidase S74 domain-containing protein n=1 Tax=Py... [more]
A0A0P1AVT1_PLAHL1.080e-4144.34Uncharacterized conserved protein (Fragment) n=1 T... [more]
A0A8K1FDS2_PYTOL1.520e-4138.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5A8EBR6_CAFRO8.690e-4150.56Peptidase S74 domain-containing protein n=3 Tax=Ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67072contigM-pyrifera_M_contig67072:28..1272 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score180.3
Seed ortholog evalue1.9e-42
Seed eggNOG ortholog4787.PITG_01491T0
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMRT@1,2QRKV@2759,3QEUA@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1245
Cds size1245
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816560.9931343-CDS-M-pyrifera_M_contig67072:27..12721622816560.9931343-CDS-M-pyrifera_M_contig67072:27..1272Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67072 28..1272 +
1692278047.40234-CDS-M-pyrifera_M_contig67072:27..12721692278047.40234-CDS-M-pyrifera_M_contig67072:27..1272Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67072 28..1272 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67072.16231.1prot_M-pyrifera_M_contig67072.16231.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67072 28..1272 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67072.16231.1

>prot_M-pyrifera_M_contig67072.16231.1 ID=prot_M-pyrifera_M_contig67072.16231.1|Name=mRNA_M-pyrifera_M_contig67072.16231.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=415bp
GGRVLVRGGLGVSKGGSVLVASGAGKRLGSGNITLRSEQGRSTGHITLQT
GDAQWDEAGSVHLIAGASLRNSTAVRGGHVQVSAGASRGGMGGDLSLSAG
DGRSGGNVVVKGGSGVGGRSFGGDIILTPGSAALGTFTNTEAMARQRRGA
LKLQDAGGEDRLLVSRNGSVSISAAVAEEITIGNKDAAGSGVRIQVGSGE
ELRFDHKDTKSVGDTSVRLRGEKMYVHVPLHSVEVVAPSDKRIKRDIVDI
DEDELRQRMLSLRLTKYKYTDEWRKVRGIDDIEVRGVIAQEVREVFPEYI
TVTKELRFDEHGFRLENFHEVNKIKIALDLLAAFQSHNRRFSAGPHSPSS
SGSVKVSSQSAGSRAFTGATPVSDSGSVLVASGDVEAGDSGTVAIRAGDS
KSGTPGSVEINGGSS
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mRNA from alignment at M-pyrifera_M_contig67072:28..1272+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67072.16231.1 ID=mRNA_M-pyrifera_M_contig67072.16231.1|Name=mRNA_M-pyrifera_M_contig67072.16231.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1245bp|location=Sequence derived from alignment at M-pyrifera_M_contig67072:28..1272+ (Macrocystis pyrifera P11B4 male)
GGTGGAAGGGTGTTGGTTCGTGGTGGACTTGGTGTTTCAAAAGGTGGATC AGTTCTTGTTGCAAGTGGTGCCGGAAAACGTCTTGGCTCCGGCAATATTA CTCTTCGATCCGAGCAAGGACGCTCAACTGGACATATCACCTTGCAAACT GGAGATGCACAATGGGATGAAGCGGGATCGGTGCATTTAATAGCTGGTGC TTCGTTGCGGAATTCAACAGCTGTTCGAGGAGGCCATGTTCAAGTTTCGG CAGGCGCTTCTCGTGGTGGCATGGGAGGGGATCTTAGCTTGTCGGCTGGT GATGGTCGCAGTGGTGGAAATGTGGTTGTGAAAGGAGGGTCAGGAGTTGG AGGGCGATCTTTTGGAGGCGACATCATACTCACTCCAGGATCAGCAGCCC TTGGGACATTCACAAACACTGAAGCCATGGCAAGGCAACGACGTGGTGCC TTGAAATTACAGGACGCTGGTGGTGAAGATCGTTTGCTTGTGTCAAGAAA TGGGTCGGTATCAATTTCTGCAGCTGTTGCAGAAGAGATTACAATTGGAA ATAAGGATGCAGCAGGTTCTGGTGTTCGGATTCAAGTTGGGTCCGGAGAG GAGTTGCGTTTTGATCACAAGGATACGAAATCTGTGGGGGACACATCTGT AAGGCTTCGCGGAGAGAAAATGTACGTTCATGTTCCCCTTCACTCCGTCG AGGTCGTTGCCCCATCGGACAAAAGAATTAAGAGGGATATTGTTGACATT GATGAAGACGAGCTTCGTCAAAGAATGTTGTCACTGCGATTGACAAAGTA CAAGTACACCGACGAGTGGCGAAAAGTACGGGGAATCGACGATATTGAAG TTCGGGGTGTGATTGCCCAAGAAGTTCGAGAAGTATTCCCGGAGTACATC ACTGTTACAAAAGAGTTGCGATTTGATGAGCATGGGTTTCGCTTGGAAAA CTTTCACGAAGTGAACAAGATAAAGATTGCACTGGATCTTCTTGCAGCAT TCCAGTCACACAACCGAAGGTTTTCCGCTGGGCCACATTCTCCATCCTCT TCAGGAAGCGTCAAAGTCTCTTCTCAATCTGCGGGGTCACGTGCATTTAC GGGCGCGACTCCAGTTTCGGATTCTGGATCAGTTCTGGTCGCTTCTGGTG ATGTCGAGGCAGGTGATTCTGGTACAGTGGCTATTCGTGCGGGTGATAGC AAGTCTGGGACACCTGGATCCGTTGAAATTAACGGTGGCTCATCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig67072:28..1272+

>mRNA_M-pyrifera_M_contig67072.16231.1 ID=mRNA_M-pyrifera_M_contig67072.16231.1|Name=mRNA_M-pyrifera_M_contig67072.16231.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2490bp|location=Sequence derived from alignment at M-pyrifera_M_contig67072:28..1272+ (Macrocystis pyrifera P11B4 male)
GGTGGAAGGGTGTTGGTTCGTGGTGGACTTGGTGTTTCAAAAGGTGGATC
AGTTCTTGTTGCAAGTGGTGCCGGAAAACGTCTTGGCTCCGGCAATATTA
CTCTTCGATCCGAGCAAGGACGCTCAACTGGACATATCACCTTGCAAACT
GGAGATGCACAATGGGATGAAGCGGGATCGGTGCATTTAATAGCTGGTGC
TTCGTTGCGGAATTCAACAGCTGTTCGAGGAGGCCATGTTCAAGTTTCGG
CAGGCGCTTCTCGTGGTGGCATGGGAGGGGATCTTAGCTTGTCGGCTGGT
GATGGTCGCAGTGGTGGAAATGTGGTTGTGAAAGGAGGGTCAGGAGTTGG
AGGGCGATCTTTTGGAGGCGACATCATACTCACTCCAGGATCAGCAGCCC
TTGGGACATTCACAAACACTGAAGCCATGGCAAGGCAACGACGTGGTGCC
TTGAAATTACAGGACGCTGGTGGTGAAGATCGTTTGCTTGTGTCAAGAAA
TGGGTCGGTATCAATTTCTGCAGCTGTTGCAGAAGAGATTACAATTGGAA
ATAAGGATGCAGCAGGTTCTGGTGTTCGGATTCAAGTTGGGTCCGGAGAG
GAGTTGCGTTTTGATCACAAGGATACGAAATCTGTGGGGGACACATCTGT
AAGGCTTCGCGGAGAGAAAATGTACGTTCATGTTCCCCTTCACTCCGTCG
AGGTCGTTGCCCCATCGGACAAAAGAATTAAGAGGGATATTGTTGACATT
GATGAAGACGAGCTTCGTCAAAGAATGTTGTCACTGCGATTGACAAAGTA
CAAGTACACCGACGAGTGGCGAAAAGTACGGGGAATCGACGATATTGAAG
TTCGGGGTGTGATTGCCCAAGAAGTTCGAGAAGTATTCCCGGAGTACATC
ACTGTTACAAAAGAGTTGCGATTTGATGAGCATGGGTTTCGCTTGGAAAA
CTTTCACGAAGTGAACAAGATAAAGATTGCACTGGATCTTCTTGCAGCAT
TCCAGTCACACAACCGAAGGTTTTCCGCTGGGCCACATTCTCCATCCTCT
TCAGGAAGCGTCAAAGTCTCTTCTCAATCTGCGGGGTCACGTGCATTTAC
GGGCGCGACTCCAGTTTCGGATTCTGGATCAGTTCTGGTCGCTTCTGGTG
ATGTCGAGGCAGGTGATTCTGGTACAGTGGCTATTCGTGCGGGTGATAGC
AAGTCTGGGACACCTGGATCCGTTGAAATTAACGGTGGCTCATCTGGTGG
AAGGGTGTTGGTTCGTGGTGGACTTGGTGTTTCAAAAGGTGGATCAGTTC
TTGTTGCAAGTGGTGCCGGAAAACGTCTTGGCTCCGGCAATATTACTCTT
CGATCCGAGCAAGGACGCTCAACTGGACATATCACCTTGCAAACTGGAGA
TGCACAATGGGATGAAGCGGGATCGGTGCATTTAATAGCTGGTGCTTCGT
TGCGGAATTCAACAGCTGTTCGAGGAGGCCATGTTCAAGTTTCGGCAGGC
GCTTCTCGTGGTGGCATGGGAGGGGATCTTAGCTTGTCGGCTGGTGATGG
TCGCAGTGGTGGAAATGTGGTTGTGAAAGGAGGGTCAGGAGTTGGAGGGC
GATCTTTTGGAGGCGACATCATACTCACTCCAGGATCAGCAGCCCTTGGG
ACATTCACAAACACTGAAGCCATGGCAAGGCAACGACGTGGTGCCTTGAA
ATTACAGGACGCTGGTGGTGAAGATCGTTTGCTTGTGTCAAGAAATGGGT
CGGTATCAATTTCTGCAGCTGTTGCAGAAGAGATTACAATTGGAAATAAG
GATGCAGCAGGTTCTGGTGTTCGGATTCAAGTTGGGTCCGGAGAGGAGTT
GCGTTTTGATCACAAGGATACGAAATCTGTGGGGGACACATCTGTAAGGC
TTCGCGGAGAGAAAATGTACGTTCATGTTCCCCTTCACTCCGTCGAGGTC
GTTGCCCCATCGGACAAAAGAATTAAGAGGGATATTGTTGACATTGATGA
AGACGAGCTTCGTCAAAGAATGTTGTCACTGCGATTGACAAAGTACAAGT
ACACCGACGAGTGGCGAAAAGTACGGGGAATCGACGATATTGAAGTTCGG
GGTGTGATTGCCCAAGAAGTTCGAGAAGTATTCCCGGAGTACATCACTGT
TACAAAAGAGTTGCGATTTGATGAGCATGGGTTTCGCTTGGAAAACTTTC
ACGAAGTGAACAAGATAAAGATTGCACTGGATCTTCTTGCAGCATTCCAG
TCACACAACCGAAGGTTTTCCGCTGGGCCACATTCTCCATCCTCTTCAGG
AAGCGTCAAAGTCTCTTCTCAATCTGCGGGGTCACGTGCATTTACGGGCG
CGACTCCAGTTTCGGATTCTGGATCAGTTCTGGTCGCTTCTGGTGATGTC
GAGGCAGGTGATTCTGGTACAGTGGCTATTCGTGCGGGTGATAGCAAGTC
TGGGACACCTGGATCCGTTGAAATTAACGGTGGCTCATCT
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