prot_M-pyrifera_M_contig66999.16216.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66999.16216.1
Unique Nameprot_M-pyrifera_M_contig66999.16216.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A4Q9LLC1_9MICR (Putative MutL-like DNA mismatch repair protein n=6 Tax=Hamiltosporidium TaxID=1176354 RepID=A0A4Q9LLC1_9MICR)

HSP 1 Score: 73.6 bits (179), Expect = 6.110e-13
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 0
Query:    1 VAKAAIRDASVIGQWDNKFILAKSFVDVAKGDRKVGGLERAAPKALSVMVFDQHGVHERIRLEHLESTSHSSPKPTHSQLAEV---ACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGR 120
            ++K  I   S+IGQ++N+FI+ K+                      S+ + DQH +HERIRLE      +     T ++L  +   ACRGA++FG  L+ +   ++L  +  CD PF CAHGR
Sbjct:  212 ISKYEISKESLIGQFNNEFIIIKNHK--------------------SLFILDQHAIHERIRLEKFIKNRNIKESITETELEILKSKACRGAIKFGDNLNDKELTKILEEIKYCDYPFICAHGR 314          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A087UE38_STEMI (DNA mismatch repair protein Mlh3 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087UE38_STEMI)

HSP 1 Score: 62.8 bits (151), Expect = 1.100e-10
Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   73 PKPTHSQLAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            PK   S L   ACRGAV+FG PLS    + LLN+LS C LPF CAHGR    P+
Sbjct:    2 PKTLSSVLNSQACRGAVKFGDPLSLSQCENLLNSLSNCKLPFQCAHGRPSIAPI 55          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: UPI000A2A8413 (DNA mismatch repair protein Mlh3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8413)

HSP 1 Score: 66.2 bits (160), Expect = 3.890e-10
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0
Query:   32 DRKVGGLERAAPKALSVMVFDQHGVHERIRLEHLESTSHSSP---KPTHSQLAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            +R+V    R  P     +V +    H    +EHL+ T+   P   K     L+  AC GA++FG  LS+E  +RL++ LS+CDLPF CAHGR    PL
Sbjct:  876 EREVSETRRXRPSVAEAIVKELVESH----IEHLKQTNGVPPVIPKTXLRVLSSQACHGAIKFGDGLSKEECERLIHQLSSCDLPFQCAHGRPSIIPL 969          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A4Y2BZI7_ARAVE (DNA mismatch repair protein Mlh3 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BZI7_ARAVE)

HSP 1 Score: 63.9 bits (154), Expect = 2.570e-9
Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   67 STSHSSPKPTHSQLAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            STS   PK  ++ L   ACRGAV+FG PL     + LL+ALSTC LPF CAHGR    P+
Sbjct: 1551 STSSVLPKTLNAVLNSQACRGAVKFGDPLDLSQCELLLDALSTCKLPFQCAHGRPSIAPI 1610          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: UPI0015AA5320 (DNA mismatch repair protein Mlh3-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AA5320)

HSP 1 Score: 63.2 bits (152), Expect = 4.790e-9
Identity = 32/60 (53.33%), Postives = 36/60 (60.00%), Query Frame = 0
Query:   67 STSHSSPKPTHSQLAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            S S+  PK   S L   ACRGAV+FG PLS    + LLN LS C LPF CAHGR    P+
Sbjct: 1577 SLSYIIPKTLSSVLNSQACRGAVKFGDPLSLSQCENLLNLLSNCKLPFQCAHGRPSIAPV 1636          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A653BXQ2_CALMS (WW domain-containing protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653BXQ2_CALMS)

HSP 1 Score: 63.2 bits (152), Expect = 4.810e-9
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   67 STSHSSPKPTHSQLAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            +TS S PK     ++  ACRGA++FG  LS+E    LLN LS+C+LPF CAHGR    PL
Sbjct: 1833 TTSSSLPKFLQDIISLEACRGAIKFGDTLSKEQCTDLLNMLSSCNLPFQCAHGRPTLVPL 1892          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A1Q9DM31_SYMMI (DNA mismatch repair protein MLH3 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DM31_SYMMI)

HSP 1 Score: 60.8 bits (146), Expect = 9.660e-9
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   80 LAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            LA  ACRGA++FG PLS+   Q+L+  L +C  PF CAHGR   FPL
Sbjct:  123 LAFKACRGAIKFGDPLSQVQMQKLIRELGSCKFPFQCAHGRPTVFPL 169          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A7S2RKY4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RKY4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.120e-8
Identity = 28/58 (48.28%), Postives = 34/58 (58.62%), Query Frame = 0
Query:   69 SHSSPKPTHSQLAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            SH+ P P    +   ACRGA++FG PLS +    L+  LS C LPF CAHGR    PL
Sbjct:  541 SHTIPPPIRRVIVSKACRGAIKFGDPLSLQECHTLIQDLSRCRLPFQCAHGRPTCVPL 598          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A482VGN3_9CUCU (DNA_mis_repair domain-containing protein n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VGN3_9CUCU)

HSP 1 Score: 61.6 bits (148), Expect = 1.610e-8
Identity = 47/124 (37.90%), Postives = 59/124 (47.58%), Query Frame = 0
Query:    3 KAAIRDASVIGQWDNKFILAKSFVDVAKGDRKVGGLERAAPKALSVMVFDQHGVHERIRLEHLESTSHSSPKPTHSQLAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            K   ++  VIGQ D+KFI                 LER   K L +++FDQH VHER+RLE               QL E    GA++FG  LS+      L  L+ C+LPF CAHGR    PL
Sbjct:  955 KEVFKNLDVIGQVDHKFIAV---------------LERT--KNL-ILLFDQHAVHERVRLE---------------QLLE----GAIKFGDSLSKTECFVHLKDLAKCNLPFQCAHGRPTLTPL 1041          
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Match: A0A7L1NFB5_RHICY (MLH3 protein (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1NFB5_RHICY)

HSP 1 Score: 59.3 bits (142), Expect = 1.760e-8
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 0
Query:   80 LAEVACRGAVRFGVPLSREAQQRLLNALSTCDLPFTCAHGRTIAFPL 126
            LA  AC GAV+F  PL+ E   RL+ ALS+C LPF CAHGR    PL
Sbjct:   82 LASQACHGAVKFNEPLTLEESCRLIEALSSCQLPFQCAHGRPSMLPL 128          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66999.16216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Q9LLC1_9MICR6.110e-1333.33Putative MutL-like DNA mismatch repair protein n=6... [more]
A0A087UE38_STEMI1.100e-1055.56DNA mismatch repair protein Mlh3 (Fragment) n=1 Ta... [more]
UPI000A2A84133.890e-1038.78DNA mismatch repair protein Mlh3 n=1 Tax=Exaiptasi... [more]
A0A4Y2BZI7_ARAVE2.570e-953.33DNA mismatch repair protein Mlh3 n=1 Tax=Araneus v... [more]
UPI0015AA53204.790e-953.33DNA mismatch repair protein Mlh3-like n=1 Tax=Steg... [more]
A0A653BXQ2_CALMS4.810e-951.67WW domain-containing protein n=1 Tax=Callosobruchu... [more]
A0A1Q9DM31_SYMMI9.660e-955.32DNA mismatch repair protein MLH3 n=1 Tax=Symbiodin... [more]
A0A7S2RKY4_9STRA1.120e-848.28Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A482VGN3_9CUCU1.610e-837.90DNA_mis_repair domain-containing protein n=1 Tax=A... [more]
A0A7L1NFB5_RHICY1.760e-857.45MLH3 protein (Fragment) n=1 Tax=Rhinopomastus cyan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042120MutL, C-terminal domain, dimerisation subdomainGENE3D2.30.42.20coord: 39..126
e-value: 8.4E-15
score: 56.5
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 69..125
coord: 2..71
IPR028830DNA mismatch repair protein Mlh3PANTHERPTHR10073:SF47DNA MISMATCH REPAIR PROTEIN MLH3coord: 2..71
coord: 69..125
IPR037198MutL, C-terminal domain superfamilySUPERFAMILY118116DNA mismatch repair protein MutLcoord: 49..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66999contigM-pyrifera_M_contig66999:1..378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66999.16216.1mRNA_M-pyrifera_M_contig66999.16216.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66999 1..378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66999.16216.1 ID=prot_M-pyrifera_M_contig66999.16216.1|Name=mRNA_M-pyrifera_M_contig66999.16216.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
VAKAAIRDASVIGQWDNKFILAKSFVDVAKGDRKVGGLERAAPKALSVMV
FDQHGVHERIRLEHLESTSHSSPKPTHSQLAEVACRGAVRFGVPLSREAQ
QRLLNALSTCDLPFTCAHGRTIAFPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042120MutL_C_dimsub
IPR038973MutL/Mlh/Pms
IPR028830Mlh3
IPR037198MutL_C_sf