mRNA_M-pyrifera_M_contig6679.16173.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6679.16173.1
Unique NamemRNA_M-pyrifera_M_contig6679.16173.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: D8LB40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB40_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 2.150e-151
Identity = 376/822 (45.74%), Postives = 459/822 (55.84%), Query Frame = 1
Query:    1 QAMVVDKPDDPRAWMNDYVDTDRESGAISG--SRSEAGRGGAARAASA----DSARRPLVTTDA-----TVATKVG-DPYKRREEADTEAPEDIRDLNALLLPSGTLPLDVERFSVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLGAMRAVMEDKIAAMTARFERLLGGSVAPLLLAIATELSREGKHLGGRGARAAIAKGPHLLRLTRSITSRELDREGHSLTFDLLWELYEDE-KRAAEASGA--------------------------TAERSGAAVAAAGSRAAKQEAWATSVVSDGDEDGVGSPEDDVAAKGGDGQKVLCVSEGDESDVGVANDAALVLAPALEEKRG-------PRQSSSGRPK----GIDPADECGQKSALRLRV-------------GRRLEGGGSTIRKCWGGRGEQQRCRGRTQGNGEERENRDVEEGEVXXXXXXXXXXXXX--------------------AEMEEKASSSVCSLKGELEQRRGPKPRSHVAPSWKVKRGSGRQEERRSTGWKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYLDGDLTHDGEMTARLFMGKGRARSVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYALIFALREWRSSAGPTSTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSQPSANPGMTATVPSGGSDHPS-GICHPATPTLDDRGHGQGAADGGVEFVVGKGDRNVGQDWRI--------VSGVGWTRQMLTARRGQRPTAWVDFEEARKIMLGWEGYK 2190
            +AMV+++PD+PRAW+ +Y+  D  +G+ S    R++  R G     +A    D+ R PL  T A     + AT V  + Y  R EADTE PED+ DLN LLLPSG LPLDVERFSVSYS AL  GWVKQGSPCCAAASVAGAWNAL G  R   GAL+SE VL AMRAV++ ++ +M ARFERLLGGS+ PLL  +  EL+ EGKHLGGRG RAA+A GPHLLRLTR +TSRE +R GHS TFDLLWELYEDE K AAE                              TA   G  V+  G+ +      AT   + G E+ VGS    +    G  +K      GD  D G+    +   +P   +          PR+ S+GRP+    G   A EC   +ALR  V             G   +G G+ +R+CW G        G     GEE+E+        XXXXXXXXXXXXX                    + + EK +SS         Q+R    +  +    +  R S        T W+WK+DLC+LLK +GGL+KL +  PST A GN G+ISTVRYLDG++  + E+TARLFMGKGR RS RL VPLS RD E+EKAKQWAALREAFL+DRQVL+FHLTNHYALIFALREWR+ +    T AAXXXXXXXXXXXXXX                  +  +A    T+ V SG  +  S G  H A  T        G A    +   G   R  G+D R          +G GWTRQ+LTARRGQRP  W+DFEEAR I+L WEGYK
Sbjct:    3 EAMVIERPDNPRAWVAEYIGRDEGTGSGSDRKDRTDVTRRGKRPQNTANSGWDTPRAPLPNTTAAATGGSAATAVDVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSRALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSHGALNSESVLRAMRAVVQGQVTSMIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAAVANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGLGPKVSVEGATSC-----ATQAATVGGEE-VGSASQ-IRTTDGAARKHPQNGHGDADDSGILGRTSSSPSPGTTKMTTTPGNHNFPRRPSTGRPRSGGGGASTASECRPGTALRRPVSADDLMLASCVAEGETGQGLGA-VRRCWEG--------GEKDVGGEEQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIGQGVTPSISFSSTVREKPASSA-------RQQRRRSSKKDIRGYRRGTRASAGATHGERTKWRWKRDLCTLLKRLGGLNKLSATKPSTGAIGNLGVISTVRYLDGEVPGNVEVTARLFMGKGRQRSCRLPVPLSTRDDEQEKAKQWAALREAFLSDRQVLIFHLTNHYALIFALREWRAPSTSDPTNAAXXXXXXXXXXXXXXTSSACGAQLKPNGTSRSRTTLNA----TSAVSSGSDNVTSTGNSHAAAGTATATTGSTGRAGAPQDDCAGAAGRGRGKDGRTRCSDSANAATGDGWTRQLLTARRGQRPAVWMDFEEARNILLRWEGYK 797          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A6H5KIX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX0_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 1.150e-144
Identity = 359/821 (43.73%), Postives = 430/821 (52.38%), Query Frame = 1
Query:    1 QAMVVDKPDDPRAWMNDYVDTDRESGAISGS--RSEAGRGGAARAASADSA----RRPLVTTDATV----ATKVGD--PYKRREEADTEAPEDIRDLNALLLPSGTLPLDVERFSVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLGAMRAVMEDKIAAMTARFERLLGGSVAPLLLAIATELSREGKHLGGRGARAAIAKGPHLLRLTRSITSRELDREGHSLTFDLLWELYEDE-KRAAE-------------------------------ASGATAERSGAAVAAAGSRAAKQEAWATSVVSDGDEDGVGSPEDDVAAKGGDGQKVLCVSEGDESDVGVANDAA-------LVLAPALEEKRGPRQSSSGRPK----GIDPADECGQKSALRLRV-------------GRRLEGGGSTIRKCW--GGRGEQQRCRGRTQGNGEERENRDVEEGEVXXXXXXXXXXXXXAEMEEKASSSVCSLKGELEQRRGPKPRSHVAPSWKVKRGSGRQEERRS------------TGWKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYLDGDLTHDGEMTARLFMGKGRARSVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYALIFALREWRSSAGPTSTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSQPSANPGMTATVPSGGSDHPSGICHPATPTLDDRGH----GQGAADGGVEFVVGKGDRNVGQDWRIVS-----GVGWTRQMLTARRGQRPTAWVDFEEARKIMLGWEGYK 2190
            +AMV+++PD+PRAW+ +Y+  D  +G+ S    R+   R G     +A+S+    R  L TT A      A K  D   Y  R EADTE PED+ DLN LLLPSG LPLDVERFSVSYS AL  GWVKQGSPCCAAASVAGAWNAL G  R   GAL+SE VL AMR V++ ++AAM ARFERLLGGS+ PLL  +  EL+ EGKHLGG+G RAA+A GPHLLRLTR +TSRE +R GHS TFDLLWELYEDE K AAE                               A G   E S   V           + AT   + G E+ VG     + A  G  +K       +  D G+   A+         +   L     PR+ S+GRP+    G   A EC   +ALR  V             G   +G G+ +R+CW  G +G      GR +                XXXXXXXXXXXXX  + +  +SS            G KP S              +  RR             T W+WK+DLC LLK +GGLDKL +  PST A GN GLISTVRYLDG++  + E+TARLFMGKGR RS RL VPLSARD EEEKAKQWAALR AFL+DRQVL+FHLTNHYALIFALREWR+ +    T AA                                S  + +   T+ V SG +                       G GA+       VG+G    G   R  S     G GWTRQ+LTARRGQRP  W+DFEEAR I+L WEGYK
Sbjct:   26 EAMVIERPDNPRAWVAEYIGRDEGTGSGSDKKDRTHVPRRGKRPENTANSSWGTPRALLPTTTAAATGGFAAKAIDVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSRALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSHGALNSESVLRAMRTVVQGQVAAMIARFERLLGGSLEPLLQVLDAELALEGKHLGGKGPRAAVANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGLDPEVSVEGVT----------SCATQATAVGGEE-VGGSASQIQATDGAERKRSQNEHEEVDDSGILGKASSSFSTGTAKMTTTLGNHNFPRRPSAGRPRSGGGGASTASECRPGTALRRPVSAGDLMPASCVAEGETGQGLGA-VRRCWESGEKGV-----GREEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGQGVTSSRVRRGSSFRSTIGGKPASSARQXXXXSSKKDTRGYRRGISTSAGAIHGERTKWRWKRDLCMLLKRIGGLDKLSATKPSTGAIGNLGLISTVRYLDGEVPGNVEVTARLFMGKGRRRSCRLPVPLSARDNEEEKAKQWAALRAAFLSDRQVLIFHLTNHYALIFALREWRAPSTSDPTIAAATAIATASSGDRHPPPTSSTCGAPLKPNGTSRSGTTLS--ATSAVASGNNXXXXXXXXXXXXXXXXXXXXSTGGAGASQNDCAGAVGQGLGKDGHTHRSASASAATGDGWTRQILTARRGQRPAVWMDFEEARNILLRWEGYK 827          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A836C9N9_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 6.340e-37
Identity = 164/527 (31.12%), Postives = 207/527 (39.28%), Query Frame = 1
Query:  217 EADTEAPEDIRDLNALLLPSGTLPLDVERFSVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLGAMRAVMEDKIAAMTARFERLLGGSVAPLLLAIATELSREGKHLGGRGARAAIAKGPHLLRLTRSITSRELDREGHSLTFDLLWELYEDEKRAAEASGATAERSGAAVAAAGSRAAKQEAWATSVVSDGDEDGVGSPEDDVAAKGGDGQKVLCVSEGDESDVGVANDAALVLAPALEEKRGPRQSSSGRPKGIDPADECGQKSALRLRVGRRLEGGGSTIRKCWGGRGEQQRCRGRTQGNGEERENRDVEEGEVXXXXXXXXXXXXXAEMEEKASSSVCSLKGELEQRRGPKPRSHVAPSWKVKRGSGRQEERRSTG----WKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYLDG----DLTHDG--------------EMTARLFMGKGRARSVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYAL 1731
            E DT    D  DL +LLLP GTLPL  +R +V Y+ AL  GWV Q SPCCAAASVAGA+NAL G +R    AL+   VL  +   + ++I  + ARFERLLG SVAPLL A+   ++ +G+ LGG GARA   K  +LLR  R + +  +  +                                                                                 EG E+      DA   LA  LE                                  R +        C G R  QQ        +GEE                        A+  E+ +    +                +    +  R + +Q+ RRS      W+WK DL  LLK MGGL+KL SK PSTAAFGNAG+I  V  L      D  H G               ++ARLFMG+       + VPLS  D E   A QWAALREAF  + QV+LFHL NHYAL
Sbjct:  125 EMDTLDSPDKLDLPSLLLPEGTLPLGHQRVAVCYNEALLRGWVAQPSPCCAAASVAGAFNALRGAARGTPRALTHFAVLSVLEETLCERIDNLRARFERLLGSSVAPLLDALRERVAADGRALGGAGARAVPRK--YLLRQVRELVAERIAGDA-------------------------------------------------------------------------------CEGGEAGSDQQPDAFRRLAELLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARAQ--------CEGRRSSQQDD---ADASGEE------------------------ADAAEQGACETQTAXXXXXXXXXXXXXXLLPLPPETAREARQQQRRRSLSSRSPWRWKTDLYELLKAMGGLEKLTSKRPSTAAFGNAGVIRAVNRLSANGISDAVHYGPTHGSSXXXXXXAARVSARLFMGRAHRSGGGIDVPLSRGDDEAAVAAQWAALREAFCKEGQVVLFHLKNHYAL 535          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A7S4LLB3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLB3_9EUGL)

HSP 1 Score: 126 bits (316), Expect = 4.240e-27
Identity = 153/518 (29.54%), Postives = 201/518 (38.80%), Query Frame = 1
Query:  217 EADTEAPEDIRDLNALLLPSGTLPLDVERFSVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLGAMRAVMEDKIAAMTARFERL-LGGSVAPLLLAIATELSREGKHLGGRGARAAIAKGPHLLRLTRSITSRELDREGHSLTFDLLWELYEDEKRAAEASGATAERSGAAVAAAGSRAAKQEAWATSVVSDGDEDGVGSPEDDVAAKGGDGQKVLCVSEGDESDVGVANDAALVLAPALEEKRGPRQSSSGRPKGIDPADECGQKSALRLRVGRRLEGGGSTIRKCWGGRGEQQRCRGRTQGNGEERENRDVEEGEVXXXXXXXXXXXXXAEMEEKASSSVCSLKGELEQRRGPKPRSHVAPSWKVKRGSGRQEERRSTGWKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYLDGDLTHDGEMTARLFMGKGRARSVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYALIFALREWRSSAG 1767
            EADT   E+  DL  LLLPSG +P+DV  FS+        GWVKQ SPCCAAAS AGAWN ++GR RS   A + + VL  MRA++ DK+    A+ ERL L G + PL  A+   L  +G  LGG    +   KG                                                          A K++ WA                          Q V    E  +S + V  D       AL      R++   + KG+D          + +RV                                                XXXXXXXXXX         +V    GE E        +H+                  TG   KK+L        G+DKL    P+TA FGN G++  VR +  D   D +++ARLFMG+  +  V   VPLSA+D + + A+QW   R  F+  +  L+FHLTNHYALIFALREW +  G
Sbjct:   88 EADTTHDEEAVDLETLLLPSGCIPVDVYNFSLHVCHGALHGWVKQHSPCCAAASTAGAWNIVTGRKRSAEDAQNQDTVLTVMRALLRDKMDDRKAKAERLYLEGPLDPLETAVRRHLETQGLTLGGE---SKTVKG----------------------------------------------------------ATKKQIWAAI------------------------QAVCHAQESPDSGIYVHQDPCCASLRALWAAERERKTMD-KEKGLD----------MEVRV--------------------------------------------FVPKXXXXXXXXXXXXXXXXXXDAVDPTSGESE--------AHLV-----------------TG---KKELLEYFHYAAGMDKLTRPRPTTAIFGNWGILQAVRRMT-DADADVDVSARLFMGRKVSSGVP-DVPLSAKDTDADIAEQWNKFRAEFVRPKTALIFHLTNHYALIFALREWITQDG 435          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A0G4ER91_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ER91_VITBC)

HSP 1 Score: 110 bits (274), Expect = 2.720e-21
Identity = 179/687 (26.06%), Postives = 254/687 (36.97%), Query Frame = 1
Query:  286 PLDVERFSVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLGAMRAVMEDKIAAMTARFERLLGGSVAPLL---LAIATELSREGKHLGGRGARAAIAKGPHLLR-----------LTRSITSRELDREGHSL---------------TFDLLWELYEDEKR---AAEASGATAERSGAAVAAAGSRAAKQEAWATSVVSDGDEDGVGSPEDDVAAKGGDGQKVLCVSEGDESDVGVANDAALVLAPALEEKRGPR---QSSSGRPKGIDPADECGQKSALRLRVGRRLEGGGSTIRKCWGGRGEQQRCRGRTQGNGEERENRDVEEGEVXXXXXXXXXXXXXAEMEEKASSSVCSLKGELEQRRGP----KPRSHVAPSWKVKRGSGRQEERRSTGWKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYLDGDLTHDGE-MTARLFMG------------KGRARSVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYALIFALREWRSSAGPTSTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSQPSANPGMTATVPSGGSDHPSGICHPATPTLDDRGHGQGAADGGVEFVVGKGDRNVGQDWRIVSGVGWTRQMLTARRGQRPTAWVDFEEARKIMLGWEGYK 2190
            PLD  +F++ +S   F GWVKQ SPCCAAASVA AWNA     R+   AL     +  M+A++ +++  +  +  RLL G ++ +L     I   L  + K LG      A  K PH ++           LT  I    + RE HSL               T   L E      R   A  A G T E   A     G R +     +  + ++G  D     +DD   + G+   V+   E + +D G   +      P L +  GP     SS   P  + P D  G    +                                           VEE E                M+ +A+ +    K +   RRG     K  S   P  KV R S  +             +  L+K    L +L    P+T+  GN G+I  +R L   L   GE +  R+ MG             G  +     V LS+RD E + A QW  L+E F     VLLFHLTNHYALI+A REW +    T+++++                                   + NP M    P+ G D   G   P +         +                      ++   V   R++LTAR+GQRPT W+ FEE R+IM+GW GY+
Sbjct:   50 PLD--KFAMGFSRRAFEGWVKQPSPCCAAASVASAWNAAMHLRRTDDKALDVYDAICVMQALVTEQLDGLRQKLARLLEGDLSEILDIETMILQGLKAQQKVLG------APKKDPHSVKNADILASLKEVLTTQIEQNVMPREPHSLEPSPVSAAPVSPTIETSPSLPEPLSAPPRPLSAVYAEGTTPEGQPARP---GPRLSVSMRLSQMLRTEGKND----QQDD---ENGEADVVVAARENNAAD-GEGGEGEAANLPGLPDPPGPTYPPDSSPMDPSPLLPEDPKGFTFDM-------------------------------------------VEEVETPNVNNTTTPRLLPFSMDPRAAKA--KTKAQKGGRRGGGGGVKGPSRAWPKGKVLRDSDIENL-----------IIDLVKKRQTLVRLTPPQPATSDIGNWGVIGGIRLLSDSLAGPGEALKCRVVMGVRTRVSDMDSPAAGGPKEEVTFVSLSSRDNEMKVAYQWCCLKEMFARPNAVLLFHLTNHYALIYAWREWETEEVVTASSSS-----------------------------------NDNPDM---APTNGDDAAEGET-PQSAAXXXXXXPRSPQXXXXXXXXXXXXXXAPAAPKVTRAV--KREVLTARKGQRPTEWISFEEMRRIMIGWAGYR 620          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A7S1U8F3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8F3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.130e-21
Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 1405 WKWKKDLCSLLKLMGGLDKLCSKS-PSTAAFGNAGLISTVRYLDGDLTHDGE-MTARLFMGKGRAR-SVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYALIFALREWRSS 1761
            W WK DL  +LK   G+ KL + + PSTA  GN G++S VR LD  L+ +G  +TA LFMG+G+ R S +++V L++    EE    WA LR AFL     L+FHL NHYA+I+ALREW  +
Sbjct:   68 WNWKSDLLEILKKRSGIIKLTNAAKPSTAPIGNWGILSAVRDLDDRLSAEGSTVTATLFMGRGKLRKSSKVKVGLNSSMVAEEVDHAWAELRTAFLTRDAALIFHLKNHYAIIYALREWEET 189          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: F2UGP8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UGP8_SALR5)

HSP 1 Score: 103 bits (256), Expect = 2.100e-19
Identity = 163/658 (24.77%), Postives = 226/658 (34.35%), Query Frame = 1
Query:  217 EADTEAPEDIRDLNALLLPSGTLPLDVERFSVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLGAMRAVMEDKIAAMTARFERLLGGSVAPLLLAIATELSREGKHLGGRGARAAIAKGPHLLRLTRSITSRELDREGHSLTFDLLWELYEDEKRAAEASGATAERSGAAVAAAGSRAAKQEAWATSVVSDGDEDGVGSPEDDVAAKGGDGQKVLCVSEGDESDVGVANDAALVLAPALEEKRGPRQSSSGRPKGIDPADECGQKSALRLRVGRRLEGGGSTIRKCWGGRGEQQRCRGRTQGNGEERENRDVEEGEVXXXXXXXXXXXXXAEMEEKASSSVCSLKGELEQRRGPKPRSHVAPSWKVKRGSGRQEERRSTGWKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYLDGDLTHDGEMTARLFMGKGRARSVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYALIFALREWRSSAGPTSTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSQPSANPGMTATVPSGGSDHPSGICHPATPTLDDRGHGQGAADGGVEFVVGKGDRNVGQDWRIVSGVGWTRQMLTARRGQRPTAWVDFEEARKIMLGWEGYK 2190
            E DT+A E++ DL ALL    ++P D  R  V+Y+  LF  WVKQ SP CAAASVAGA+NALS R R    ALS   +L   R V++  +     R    LG   + L+  +  +L+   +    +       KG     L + I  REL  +  S T  +  +L     R A A   + ++                        DG + G+G         GGD             D               +     +Q     P                  VG R+       ++  G  G+Q+   G   G+GE+++  +V                        AS++     G   Q         V P                   KWKK L + +  + G+ KL  + PSTA FGN G+ S  + +     +D  +  R FMGK    S R+Q  L  RD   +   QW AL   F     VLLFHLTNHYAL++A+REW    G                                                                                                     IV      R++LTAR+GQRP AW+ F E RKI+LGW GY+
Sbjct:   47 ERDTDAAEEV-DLTALLYDGDSMPTDKRRLCVAYNRQLFDSWVKQFSPACAAASVAGAFNALSRRRRDDEQALSQHDLLEEFRNVLDGIVIKHHRRCSFALGADPSDLVEKLKLKLAENDQSFATK-----FPKGKKKKILWQHI--RELVDDDVSNTERVFAQLRTVYGRHAPARDGSGDK------------------------DGSQGGIG---------GGDIDXXXXXXXXXXHDEXXXXXXXXXXXXXXQ-----KQQKQDAPT-----------------VGSRVTACVDVSKESGGDDGDQKEKEG--SGDGEKQKGDNV------------------------ASTTATXXXGGTAQHNEELEELAVTP----------------VSPKWKKALMAYVNAVIGMAKLTKERPSTAYFGNWGITSACKAVSSQ--YDTVLECRPFMGKAMKGS-RVQHKLLTRDDARKIEDQWRALFSEFNRSNTVLLFHLTNHYALVYAMREWEDDTG-----------------------------------------------------------------------------------------------------IV------REILTARKGQRPKAWIGFTEVRKILLGWSGYQ 489          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A7S2W675_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W675_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.990e-19
Identity = 60/129 (46.51%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  238 EDIRDLNALLLPSGTLPLDV-----ERFSVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLGAMRAVMEDKIAAMTARFERLLGGSVAPLLLAIATELSREGKHLGGRGARAA 609
            ED+ D+ ALLLP    PLD       +FSVSYS     GWVKQ SPCCAAAS+AGAWNA+    RS   ALS    +     +  +   A  AR ERLLG  + PL   +   L+ EGK LGG+   AA
Sbjct:    3 EDVVDVKALLLPPAPHPLDSINCTRSKFSVSYSRGALEGWVKQPSPCCAAASMAGAWNAVMRLHRSAPDALSHLEAVPIFADIQRELTMAKQARLERLLGAPLEPLKTQVIAALAAEGKRLGGKNDEAA 131          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A7S3FG58_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FG58_9EUKA)

HSP 1 Score: 100 bits (249), Expect = 5.250e-19
Identity = 82/264 (31.06%), Postives = 101/264 (38.26%), Query Frame = 1
Query: 1405 WKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYLDGDLTHDGEMTARLFMG--KGRARSVRLQVPLSARDGEEEKAKQWAALREAFLADRQVLLFHLTNHYALIFALREWRSSAGPTSTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSQPSANPGMTATVPSGGSDHPSGICHPATPTLDDRGHGQGAADGGVEFVVGKGDRNVGQDWRIVSGVGWTRQMLTARRGQRPTAWVDFEEARKIMLGWEGYK 2190
            W W  D+ S   + GGL+KL  + PST  FGN  ++  +R L  D       T   FMG  K    S    V LS  D E  +  QW ALR  F      L+FHLTNHYAL+FALREW                                                  P   A+V SGGS                         GG   V            R+V      RQ+L+ RRGQRP+ W+DF+E R+ ML W GY+
Sbjct:  204 WAWTSDVASYYAVEGGLEKLNREKPSTGFFGNGDVVEGMRMLS-DGFDSAACTIAPFMGRLKPSGPSAAEFVKLSPTDDEATRGAQWTALRARFSQPGCALIFHLTNHYALLFALREWHEPL----------------------------------------------PVGEASVGSGGS-------------------------GGAPCV------------RVV------RQVLSTRRGQRPSVWIDFDEMRRTMLKWNGYR 377          
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Match: A0A7S0SHR8_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHR8_9CHLO)

HSP 1 Score: 93.2 bits (230), Expect = 8.690e-17
Identity = 77/272 (28.31%), Postives = 104/272 (38.24%), Query Frame = 1
Query: 1405 WKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAGLISTVRYL----------DGDLTHDGEMTARLFMGKGRARSVRLQVPLSARDGEEEKA-KQWAALREAFLADRQVLLFHLTNHYALIFALREWRSSAGPTSTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSQPSANPGMTATVPSGGSDHPSGICHPATPTLDDRGHGQGAADGGVEFVVGKGDRNVGQDWRIVSGVGWTRQMLTARRGQRPTAWVDFEEARKIMLGWEGY 2187
            W W+ DL  +LK  GGL+KL    PST  FGN G+I   R +          D        +T ++ +G        L+V LS++  ++  A K+WA LR  F  D  VL+FHL NHYAL++ALRE ++   P  T A                                                               T+D     Q      V  V                     R++LTAR+GQRPT W+ +EEAR+ ML W GY
Sbjct:  148 WDWRADLHEILKKRGGLEKLNRPKPSTGEFGNWGVIEACRRVSAAXXXXXXSDPRAPPTPVVTCKVVVGTKTKARKNLEVVLSSKGDQDAAAEKEWAGLRSLFARDDIVLIFHLKNHYALVYALRE-QTHRAPIQTDAG--------------------------------------------------------------TVDIEEENQDGEHTAVRLVR-------------------RRELLTARKGQRPTEWIPWEEARETMLRWTGY 337          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6679.16173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB40_ECTSI2.150e-15145.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIX0_9PHAE1.150e-14443.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C9N9_9STRA6.340e-3731.12Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A7S4LLB3_9EUGL4.240e-2729.54Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0G4ER91_VITBC2.720e-2126.06Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S1U8F3_9STRA4.130e-2147.54Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F2UGP8_SALR52.100e-1924.77Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7S2W675_9STRA4.990e-1946.51Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3FG58_9EUKA5.250e-1931.06Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0SHR8_9CHLO8.690e-1728.31Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6679contigM-pyrifera_M_contig6679:3578..9964 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score480.7
Seed ortholog evalue1.2e-132
Seed eggNOG ortholog2880.D8LB40
Hectar predicted targeting categoryother localisation
EggNOG OGs2DFF2@1,2S5S6@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-27_005330.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2190
Cds size2184
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816558.0779505-CDS-M-pyrifera_M_contig6679:3577..40721622816558.0779505-CDS-M-pyrifera_M_contig6679:3577..4072Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 3578..4072 -
1692278045.8200293-CDS-M-pyrifera_M_contig6679:3577..40721692278045.8200293-CDS-M-pyrifera_M_contig6679:3577..4072Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 3578..4072 -
1622816558.0893447-CDS-M-pyrifera_M_contig6679:5607..57451622816558.0893447-CDS-M-pyrifera_M_contig6679:5607..5745Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 5608..5745 -
1692278045.8296163-CDS-M-pyrifera_M_contig6679:5607..57451692278045.8296163-CDS-M-pyrifera_M_contig6679:5607..5745Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 5608..5745 -
1622816558.1032426-CDS-M-pyrifera_M_contig6679:6467..65631622816558.1032426-CDS-M-pyrifera_M_contig6679:6467..6563Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 6468..6563 -
1692278045.837735-CDS-M-pyrifera_M_contig6679:6467..65631692278045.837735-CDS-M-pyrifera_M_contig6679:6467..6563Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 6468..6563 -
1622816558.1165845-CDS-M-pyrifera_M_contig6679:7293..82511622816558.1165845-CDS-M-pyrifera_M_contig6679:7293..8251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 7294..8251 -
1692278045.847007-CDS-M-pyrifera_M_contig6679:7293..82511692278045.847007-CDS-M-pyrifera_M_contig6679:7293..8251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 7294..8251 -
1622816558.127276-CDS-M-pyrifera_M_contig6679:8919..92091622816558.127276-CDS-M-pyrifera_M_contig6679:8919..9209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 8920..9209 -
1692278045.8563871-CDS-M-pyrifera_M_contig6679:8919..92091692278045.8563871-CDS-M-pyrifera_M_contig6679:8919..9209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 8920..9209 -
1622816558.1408865-CDS-M-pyrifera_M_contig6679:9751..99581622816558.1408865-CDS-M-pyrifera_M_contig6679:9751..9958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 9752..9958 -
1692278045.8656087-CDS-M-pyrifera_M_contig6679:9751..99581692278045.8656087-CDS-M-pyrifera_M_contig6679:9751..9958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6679 9752..9958 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816558.1533194-UTR-M-pyrifera_M_contig6679:9958..99641622816558.1533194-UTR-M-pyrifera_M_contig6679:9958..9964Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6679 9959..9964 -
1692278045.8751802-UTR-M-pyrifera_M_contig6679:9958..99641692278045.8751802-UTR-M-pyrifera_M_contig6679:9958..9964Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6679 9959..9964 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6679.16173.1prot_M-pyrifera_M_contig6679.16173.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6679 3578..9958 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6679.16173.1

>prot_M-pyrifera_M_contig6679.16173.1 ID=prot_M-pyrifera_M_contig6679.16173.1|Name=mRNA_M-pyrifera_M_contig6679.16173.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=728bp
MVVDKPDDPRAWMNDYVDTDRESGAISGSRSEAGRGGAARAASADSARRP
LVTTDATVATKVGDPYKRREEADTEAPEDIRDLNALLLPSGTLPLDVERF
SVSYSTALFAGWVKQGSPCCAAASVAGAWNALSGRSRSMVGALSSELVLG
AMRAVMEDKIAAMTARFERLLGGSVAPLLLAIATELSREGKHLGGRGARA
AIAKGPHLLRLTRSITSRELDREGHSLTFDLLWELYEDEKRAAEASGATA
ERSGAAVAAAGSRAAKQEAWATSVVSDGDEDGVGSPEDDVAAKGGDGQKV
LCVSEGDESDVGVANDAALVLAPALEEKRGPRQSSSGRPKGIDPADECGQ
KSALRLRVGRRLEGGGSTIRKCWGGRGEQQRCRGRTQGNGEERENRDVEE
GEVENGEEEEGREVMGAEMEEKASSSVCSLKGELEQRRGPKPRSHVAPSW
KVKRGSGRQEERRSTGWKWKKDLCSLLKLMGGLDKLCSKSPSTAAFGNAG
LISTVRYLDGDLTHDGEMTARLFMGKGRARSVRLQVPLSARDGEEEKAKQ
WAALREAFLADRQVLLFHLTNHYALIFALREWRSSAGPTSTTAAAASGTT
TSTATASATIATVPATATASATATINSQPSANPGMTATVPSGGSDHPSGI
CHPATPTLDDRGHGQGAADGGVEFVVGKGDRNVGQDWRIVSGVGWTRQML
TARRGQRPTAWVDFEEARKIMLGWEGYK
back to top

mRNA from alignment at M-pyrifera_M_contig6679:3578..9964-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6679.16173.1 ID=mRNA_M-pyrifera_M_contig6679.16173.1|Name=mRNA_M-pyrifera_M_contig6679.16173.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6387bp|location=Sequence derived from alignment at M-pyrifera_M_contig6679:3578..9964- (Macrocystis pyrifera P11B4 male)
CAGGCAATGGTGGTCGATAAACCCGATGATCCTCGCGCGTGGATGAACGA CTACGTCGACACGGATAGAGAGAGTGGCGCCATCAGCGGCAGCAGATCAG AGGCGGGGAGGGGCGGGGCGGCGCGCGCCGCCAGTGCAGATTCGGCTCGC AGGCCGCTCGTTACCACGGATGCCACCGTCGCAACAAAAGTGGGAGACCC GTATAAACGACGTGTGCCTGAATGATGCAAGGAGAGATGTTTGTGTTCTT GTGTGTGGTTTTGTTGTTTGGCGATGTTAGAGCTTTCGCCCCAGCTACCG CAGGGCTATGGTTGTGTGTCACGGTCGGAAACCGGTTTAGCGCTTGACGT GTCGTGCTTTCCTGCGATAAACCCAACCGAAGCCAAGCGAAGCCAAACCC TGCGAAGCCAAAACCACGCGAAGCCAAACATTTGGATGTTAAACCTTGAA TAAAGCCGACGTCAGGAGCGAAACCCAGATAAACAGATCAGAACACCATC GCAACAACGAACGAACTCAAATATTCCATTACACCGGCAAAGCTAACCGG CTCGGATTCCCTCCGAACCCTCATATTTATGTCAACTTGCGCGAACTCGC TGACCCGCGCGATAAGATTCGTTCCACCCTCCCTACGTGTGTCAGTCGAG TACGGACGCGGCGGCGTTCAGCCGCCTCCAGGGTACAATAGTACGCGTGT GCGAGGCCCTCGGCAGTGACCCCTATATTTCCCCCATTGGGTCTCCTGCG AGCAGGAAGAGGCTGACACAGAAGCCCCGGAAGACATCCGCGACCTCAAC GCCCTCCTGCTTCCGTCTGGAACTCTGCCTCTCGATGTCGAGCGCTTTAG CGTCAGCTACTCGACGGCTCTCTTCGCCGGGTGGGTAAAACAGGGCTCCC CGTGTTGCGCTGCTGCCTCCGTCGCCGGAGCTTGGAACGCCCTGAGTGGG AGATCGAGGAGCATGGTGGGAGCGCTGAGCAGCGAGCTGGTGTTGGGGGC CATGCGCGCAGTAATGGAGGACAAAATCGCTGCCATGACTGCTAGGTAAC AAGTGCTCTTAGTTTGTGGTAGGACCGTGCCCTTGCGGTTGCAACTGAGC CGGGGCAAACGGGTTCTAAAGATGTGGTCCAATGCCCAAGGGTCGCTTTT CCGACAACGACCAATCGATCGAGCTGATTCGGCGAATCGATGATTCCTGT GGCCTGTCAGGATTGGTAATGCATGGGCCCAGGCCGAAGGTTGCTCGAAC TACGGTACGTAGATGGGTTGGCATGGTGAAAGTGTCGTCGCATACGCCAG GCCTTGCCTTGCTCTATACATGGTACCCGACAAAGCTGACCATCAGACAG AGATTACGCCAGCAGACAGCCGGCGACGATAACCAAACATGTCTTCGCGG TCCCCGCCCCCCGGCACTTGTCTCCCCCGACATTTCTCTCAGCTGCTCAA GTTGTTTCCTTCTTCGACCCCCCTACCCCGGCTTCGCCGAAACGAAAGTT GATCACCAGTTCGCGGCGGCAACGGTGGATCAAAGCCCGATACACTTACT GTAGCTGCAGATGTGTCTACTGCCCGCCAGCCAAACGCGATGGATGTCCA TCTTGATAGGTGGACTCTAACTGGCAATAGACATATTTCAACCCGAAAAC ACAAAACACACAAACTTCTACATTGTATATTATGATATCTATGTATGTTT ATATGCCGATCAGGTTCGAAAGGCTTCTGGGCGGAAGCGTGGCGCCCCTC CTTCTCGCCATCGCGACCGAGCTGTCCCGCGAGGGAAAACACCTGGGCGG CCGGGGGGCGAGAGCCGCGATCGCCAAGGGTCCCCACCTTCTGCGGCTAA CCCGTTCTATCACTTCCCGAGAGCTTGACAGAGAGGGTCACTCCCTTACT TTTGATCTCCTGTGGGAGTTATACGAAGACGAGAAAAGGGCAGCCGAAGC ATCCGGGGCCACGGCGGAGAGATCGGGGGCGGCGGTGGCAGCGGCGGGTA GTCGTGCTGCTAAGCAGGAGGCATGGGCTACAAGCGTGGTAAGCGATGGT GATGAGGACGGCGTCGGTTCTCCGGAAGACGATGTCGCCGCAAAGGGTGG CGATGGACAGAAGGTCTTGTGCGTCAGCGAGGGAGACGAGAGCGACGTAG GCGTGGCAAACGATGCCGCTCTTGTACTAGCGCCGGCGTTGGAAGAGAAG AGGGGTCCGCGGCAGTCGTCCAGTGGGAGGCCGAAAGGCATCGACCCAGC CGATGAGTGCGGGCAAAAGAGTGCCCTGAGGCTTCGGGTGGGCCGTCGCC TTGAGGGAGGGGGCAGTACGATCCGGAAGTGCTGGGGGGGTAGAGGAGAA CAGCAAAGGTGTCGAGGGAGGACGCAAGGCAATGGGGAGGAGAGGGAGAA CAGAGATGTCGAGGAGGGGGAGGTGGAAAATGGAGAAGAAGAGGAAGGGA GGGAGGTGATGGGTGCTGAAATGGAAGAGAAGGCGAGTAGCAGCGTTTGC AGTTTGAAGGGGGAGTTGGAGCAACGAAGAGGCCCGAAGCCGAGAAGCCA TGTCGCACCTTCTTGGAAGGTGAAAAGAGGCAGCGGCAGACAGGAAGAAC GAAGGTCCACCGGGTGGAAATGGAAGAAGGACCTGTGCAGCCTCCTGAAG CTCATGGGCGGGCTGGACAAGGTGACGAAGCCTACCTCGGTGTAACACAC GAGACGCCGTGGTTGGAACGTACCGCGCGCCTGCCCAAACCGTGCGCGAT ACGCGCCATCGTGTCGAGAATCTCCCCCTATAACCTTTCGAACGTTTTTT TGTTTTGTGTTCGGTTTATCAAGTCCCCGTCACGACATCGAAGTTGTTTC GCTAGCTTCCACTACCGCGTACCGGTTTATCTGACCGGTGCGATTAGTAC CGGTATATCTGGCGGGTACGATATCGAACCATCTGGCAAGAACAGGTGCA ACTCAAAAAAATGGGCGCTTGTCGCGCACGTGCACATGTCACTGATGTGC TTGTAAACCCGCCACTCATAGACTAAGTAGCAATACCTCTCGGGAACAGG TCAGGCGGGGGAGGGGGGGGTAGGGGGGGCTGCTTCTGGGCAGAGGCAGA CGGTGGAAATGAGAACCAAAGTTCACAAGCCTGATACTTTTCGACAGCGT CAAGCGACTTCAACGTTTATCAAACAACTCATGTCCGCCCTCGCTACTTT GTTACTGTTGCAGTCGCCGGCCGTCCTGTTGACGGCAGCCACGGGTTGCT CTCCATCTTTTAGTGGTATTCATTCCAGCGCGCGCGCGCGACTGATCGAA ATACCGCCGCCCTCTATCCACTGCTCCGTCGCATGACACGCCTCAACCAC AACGTCGCGGCCAACTGCTGTGTTGCGCAACCGTTCGATGGTGGATGGCA GCTGTGCTCAAAGAGCCCGTCGACCGCTGCCTTCGGAAACGCGGGGCTCA TCTCCACCGTGCGGTACCTCGACGGCGACCTGACCCACGACGGCGAGGTG CGCGTGTCCCCGCTGTAAGCTTAGCCGCCACGGTGCTTCCACCAGTGCTT TCTGTGCTTCTCGCAGGCCACCTGAGGTGTGCTAATAGAGTATGAAGTAT GGTACGGTATTTTATGTGGAGCGGAGAAAGTACCTTGCCGTGCGATGCGG TACGGTAAAGCACGGTGTGCCATGGTGGTACAGAAAGGTGTGCTACGGTA CGGACGGCTGACGAAGACAAACACTGTACGGCACGCCAAAGGCCGATAGC AGCTGCTGTGCAGGACCCGTCTGCTGACAGGATGGGCTCTAACAGTCGGG AGCACATCGGCTACCGTGTACGAGCAGCACAGTTTTTTGCCTTTGACATG CCCTGCCGAGAGGGGTTTCATTACTCCCTTCTCGCGAGAACGCTTGGCCG AGGTGGGTGTTCCCGCGATTTCCCGCGCGTCTTGACCACTGGATGACTCT TATCTACTCGCCGGAGGGGAATGACATACGCCTTCGCACAGGGTATGATA TTTTGCGGGTGCACAATTTTCTTCCTGGTGCAGGAGATAAGATGGAACAG CAACTCCCGGATTCGTTGCACCCCCTGCGTCGCTAAAGTGCACCAATACG CTCTGGTCTTTTCTTGTTATGATGACCGATATGATGACACTGCTATTGTT GGTGTCTCCAACAACCGACAAGGTGGTTTTGTTTTAGCTCAGTTTATTTT TTTCGTGCCTCCCGCGCAGATGACGGCGCGGCTGTTCATGGGCAAGGGCA GGGCCCGATCGGTGCGACTTCAAGTGCCGCTTTCTGCACGAGACGGCGAA GAGGAGAAGGCCAAGCAGTGGGCGGCCCTGAGAGAGGCGTTTTTGGCAGA TCGACAGGTGAATCCAAAGCGCACAGATTGCGAAGTCAGCTTCTAACGAT GAAACTTATCACCTACTATTGGCTGTACGTCGACGGCGGCAGCGTTCCGC CGGGGTAAGGAAGCAACTTCGTGGCCAGGGTGTTGTTTTTTGTCGCGGTT CGATTTACCCGTCAGCTCTTGGAGGCCGCGCGTAAAGGGAAATCGTTTTT TTTCGTCGAGCACGGGGCCTGATGGCGTGCCCCACTAGCAAGCGATACCG CGTGGCAGACCAAGCGTGGCGAGTTTAGAAGGACGCAGGTGTATGGCGCC AAGAACGCACTTCACTCTGTCGTCACGCAGCCACACCGCGGCAACGTTCA TCTCCCGGAGCCGCGGGAACAAGGCGAGGCGCGAGAGAGCCTAGAATTTA CCTCCATGCTAACTTAGGTTGGTATTTTTGCAATTCAAGGCTAGGGTGGG ATGGAACATCTCGATCGATGGACCCGGCACGGAACTCCTAGCGCTCTTTT AACCTTGGAGCCCCTTGTAAAGATCCGTCCTTTGCGTCGTCGAACCTCGA CAGCTGCGGGCGTATTTTCTCGGCCGAGTGTGCGGCTCTAGGCACGTATC TTGCCGCTTCGGGAAGGGGAACGCCCGAGCGTACAGTAAAAGGTTGAGCT CGTCGTCGTGCCTAGCCACCGCCCCGCGAGCATGACCTTATCAGACGGAA GCGACCAGCTCTGGCTTTTATTATGCCGGTGTGTTTTCTTCCAGCAAGGC TGAGCTGCAATCGACGTACAAGCGGGTCCCGGACGGTAATGAATCTACCA TGCCAACGAGGGGCCACCAAATTGTCCAGTAGCTGGCCATCATCGCTTGC GCGCCGCATTGTACCGCCGCAGATGACACCAGCGCTCTCAAAGTTTCTTC CGAAAGACCCTGTGCATGCTTTGTTTCTCCTTGCAAGCCTTCTTTACTCC TCCCTTGTAGTCTCACGGGCAGACCCGTACATCTGGCCGCGTCTGCTGAA GAAAGAAAGCATGCACCGGGCATTTCGGCAGAAACTTTGAGATGATGGAA GTCTGCTTCGCCTCCTTCTCGAGCTGTTATTTCCGACAGGTGGCTTGATG TGTCCCCTCCCCCCCCTTATCGCGGCAGCCACAATGCGTCGAACTGCGCC TCCCGACGAAACCTGCGCAAGCTTAGACCCGCCATGTATGAAGCAGCGCT CTGGTAAATAGTGGGGGGCGGTGATCTGTCGTTCGAAAAAAGGCCTACCC GGGTCCTTGCAGGAGTGCTGCCCAGTCCTCATCGCTACGCTTTAGGCGTC GCCGTGGTGCCATCTTCGCTGAAGCCCCTCTTATTTTAGTAAGCCGTTGC TTTTGTTCTCATTCAACTTGATGAAACGGCCTGGTGCACTGGTATTTCTA ACTGAATTCTGCCCTCGCCCCGCTCCGCCCCGCCCCCCCACTCCTGTCCG GTCCGGTCCGCTGATGTTGCGATGCATGCCATACGGCGGGTTTGTTATTT TCCTGCTGGTGATCGTTCCCCTGTACCTTGCCGGCAGCGCAGGTGCTCCT TTTCCACCTGACGAATCACTATGCTCTCATATTCGCGTTGAGAGAGTGGC GCTCTTCGGCCGGCCCGACTTCGACCACCGCGGCTGCCGCTTCCGGCACC ACCACTTCCACCGCCACCGCCTCCGCCACCATCGCCACCGTTCCCGCTAC AGCCACCGCTTCCGCTACCGCTACTATCAATAGTCAACCTTCTGCGAACC CTGGTATGACCGCCACCGTTCCCTCCGGCGGTTCCGATCACCCCTCCGGA ATTTGTCACCCCGCGACGCCTACCCTCGACGATCGTGGTCACGGTCAAGG CGCCGCGGATGGCGGCGTCGAGTTTGTAGTGGGCAAAGGCGACCGGAATG TTGGGCAGGACTGGCGAATCGTGTCTGGAGTGGGGTGGACGAGGCAGATG CTAACGGCGCGGAGAGGCCAGCGACCGACAGCGTGGGTGGACTTCGAGGA GGCCCGCAAGATCATGCTCGGCTGGGAGGGGTACAAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig6679:3578..9964-

>mRNA_M-pyrifera_M_contig6679.16173.1 ID=mRNA_M-pyrifera_M_contig6679.16173.1|Name=mRNA_M-pyrifera_M_contig6679.16173.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4368bp|location=Sequence derived from alignment at M-pyrifera_M_contig6679:3578..9964- (Macrocystis pyrifera P11B4 male)
ATGGTGGTCGATAAACCCGATGATCCTCGCGCGTGGATGAACGACTACGT
CGACACGGATAGAGAGAGTGGCGCCATCAGCGGCAGCAGATCAGAGGCGG
GGAGGGGCGGGGCGGCGCGCGCCGCCAGTGCAGATTCGGCTCGCAGGCCG
CTCGTTACCACGGATGCCACCGTCGCAACAAAAGTGGGAGACCCGTATAA
ACGACGTATGGTGGTCGATAAACCCGATGATCCTCGCGCGTGGATGAACG
ACTACGTCGACACGGATAGAGAGAGTGGCGCCATCAGCGGCAGCAGATCA
GAGGCGGGGAGGGGCGGGGCGGCGCGCGCCGCCAGTGCAGATTCGGCTCG
CAGGCCGCTCGTTACCACGGATGCCACCGTCGCAACAAAAGTGGGAGACC
CGTATAAACGACGTGAAGAGGCTGACACAGAAGCCCCGGAAGACATCCGC
GACCTCAACGCCCTCCTGCTTCCGTCTGGAACTCTGCCTCTCGATGTCGA
GCGCTTTAGCGTCAGCTACTCGACGGCTCTCTTCGCCGGGTGGGTAAAAC
AGGGCTCCCCGTGTTGCGCTGCTGCCTCCGTCGCCGGAGCTTGGAACGCC
CTGAGTGGGAGATCGAGGAGCATGGTGGGAGCGCTGAGCAGCGAGCTGGT
GTTGGGGGCCATGCGCGCAGTAATGGAGGACAAAATCGCTGCCATGACTG
CTAGGAAGAGGCTGACACAGAAGCCCCGGAAGACATCCGCGACCTCAACG
CCCTCCTGCTTCCGTCTGGAACTCTGCCTCTCGATGTCGAGCGCTTTAGC
GTCAGCTACTCGACGGCTCTCTTCGCCGGGTGGGTAAAACAGGGCTCCCC
GTGTTGCGCTGCTGCCTCCGTCGCCGGAGCTTGGAACGCCCTGAGTGGGA
GATCGAGGAGCATGGTGGGAGCGCTGAGCAGCGAGCTGGTGTTGGGGGCC
ATGCGCGCAGTAATGGAGGACAAAATCGCTGCCATGACTGCTAGGTTCGA
AAGGCTTCTGGGCGGAAGCGTGGCGCCCCTCCTTCTCGCCATCGCGACCG
AGCTGTCCCGCGAGGGAAAACACCTGGGCGGCCGGGGGGCGAGAGCCGCG
ATCGCCAAGGGTCCCCACCTTCTGCGGCTAACCCGTTCTATCACTTCCCG
AGAGCTTGACAGAGAGGGTCACTCCCTTACTTTTGATCTCCTGTGGGAGT
TATACGAAGACGAGAAAAGGGCAGCCGAAGCATCCGGGGCCACGGCGGAG
AGATCGGGGGCGGCGGTGGCAGCGGCGGGTAGTCGTGCTGCTAAGCAGGA
GGCATGGGCTACAAGCGTGGTAAGCGATGGTGATGAGGACGGCGTCGGTT
CTCCGGAAGACGATGTCGCCGCAAAGGGTGGCGATGGACAGAAGGTCTTG
TGCGTCAGCGAGGGAGACGAGAGCGACGTAGGCGTGGCAAACGATGCCGC
TCTTGTACTAGCGCCGGCGTTGGAAGAGAAGAGGGGTCCGCGGCAGTCGT
CCAGTGGGAGGCCGAAAGGCATCGACCCAGCCGATGAGTGCGGGCAAAAG
AGTGCCCTGAGGCTTCGGGTGGGCCGTCGCCTTGAGGGAGGGGGCAGTAC
GATCCGGAAGTGCTGGGGGGGTAGAGGAGAACAGCAAAGGTGTCGAGGGA
GGACGCAAGGCAATGGGGAGGAGAGGGAGAACAGAGATGTCGAGGAGGGG
GAGGTGGAAAATGGAGAAGAAGAGGAAGGGAGGGAGGTGATGGGTGCTGA
AATGGAAGAGAAGGCGAGTAGCAGCGTTTGCAGTTTGAAGGGGGAGTTGG
AGCAACGAAGAGGCCCGAAGCCGAGAAGCCATGTCGCACCTTCTTGGAAG
GTGAAAAGAGGCAGCGGCAGACAGGAAGAACGAAGGTCCACCGGGTGGAA
ATGGAAGAAGGACCTGTGCAGCCTCCTGAAGCTCATGGGCGGGCTGGACA
AGGTTCGAAAGGCTTCTGGGCGGAAGCGTGGCGCCCCTCCTTCTCGCCAT
CGCGACCGAGCTGTCCCGCGAGGGAAAACACCTGGGCGGCCGGGGGGCGA
GAGCCGCGATCGCCAAGGGTCCCCACCTTCTGCGGCTAACCCGTTCTATC
ACTTCCCGAGAGCTTGACAGAGAGGGTCACTCCCTTACTTTTGATCTCCT
GTGGGAGTTATACGAAGACGAGAAAAGGGCAGCCGAAGCATCCGGGGCCA
CGGCGGAGAGATCGGGGGCGGCGGTGGCAGCGGCGGGTAGTCGTGCTGCT
AAGCAGGAGGCATGGGCTACAAGCGTGGTAAGCGATGGTGATGAGGACGG
CGTCGGTTCTCCGGAAGACGATGTCGCCGCAAAGGGTGGCGATGGACAGA
AGGTCTTGTGCGTCAGCGAGGGAGACGAGAGCGACGTAGGCGTGGCAAAC
GATGCCGCTCTTGTACTAGCGCCGGCGTTGGAAGAGAAGAGGGGTCCGCG
GCAGTCGTCCAGTGGGAGGCCGAAAGGCATCGACCCAGCCGATGAGTGCG
GGCAAAAGAGTGCCCTGAGGCTTCGGGTGGGCCGTCGCCTTGAGGGAGGG
GGCAGTACGATCCGGAAGTGCTGGGGGGGTAGAGGAGAACAGCAAAGGTG
TCGAGGGAGGACGCAAGGCAATGGGGAGGAGAGGGAGAACAGAGATGTCG
AGGAGGGGGAGGTGGAAAATGGAGAAGAAGAGGAAGGGAGGGAGGTGATG
GGTGCTGAAATGGAAGAGAAGGCGAGTAGCAGCGTTTGCAGTTTGAAGGG
GGAGTTGGAGCAACGAAGAGGCCCGAAGCCGAGAAGCCATGTCGCACCTT
CTTGGAAGGTGAAAAGAGGCAGCGGCAGACAGGAAGAACGAAGGTCCACC
GGGTGGAAATGGAAGAAGGACCTGTGCAGCCTCCTGAAGCTCATGGGCGG
GCTGGACAAGCTGTGCTCAAAGAGCCCGTCGACCGCTGCCTTCGGAAACG
CGGGGCTCATCTCCACCGTGCGGTACCTCGACGGCGACCTGACCCACGAC
GGCGAGCTGTGCTCAAAGAGCCCGTCGACCGCTGCCTTCGGAAACGCGGG
GCTCATCTCCACCGTGCGGTACCTCGACGGCGACCTGACCCACGACGGCG
AGATGACGGCGCGGCTGTTCATGGGCAAGGGCAGGGCCCGATCGGTGCGA
CTTCAAGTGCCGCTTTCTGCACGAGACGGCGAAGAGGAGAAGGCCAAGCA
GTGGGCGGCCCTGAGAGAGGCGTTTTTGGCAGATCGACAGATGACGGCGC
GGCTGTTCATGGGCAAGGGCAGGGCCCGATCGGTGCGACTTCAAGTGCCG
CTTTCTGCACGAGACGGCGAAGAGGAGAAGGCCAAGCAGTGGGCGGCCCT
GAGAGAGGCGTTTTTGGCAGATCGACAGGTGCTCCTTTTCCACCTGACGA
ATCACTATGCTCTCATATTCGCGTTGAGAGAGTGGCGCTCTTCGGCCGGC
CCGACTTCGACCACCGCGGCTGCCGCTTCCGGCACCACCACTTCCACCGC
CACCGCCTCCGCCACCATCGCCACCGTTCCCGCTACAGCCACCGCTTCCG
CTACCGCTACTATCAATAGTCAACCTTCTGCGAACCCTGGTATGACCGCC
ACCGTTCCCTCCGGCGGTTCCGATCACCCCTCCGGAATTTGTCACCCCGC
GACGCCTACCCTCGACGATCGTGGTCACGGTCAAGGCGCCGCGGATGGCG
GCGTCGAGTTTGTAGTGGGCAAAGGCGACCGGAATGTTGGGCAGGACTGG
CGAATCGTGTCTGGAGTGGGGTGGACGAGGCAGATGCTAACGGCGCGGAG
AGGCCAGCGACCGACAGCGTGGGTGGACTTCGAGGAGGCCCGCAAGATCA
TGCTCGGCTGGGAGGGGTACAAGGTGCTCCTTTTCCACCTGACGAATCAC
TATGCTCTCATATTCGCGTTGAGAGAGTGGCGCTCTTCGGCCGGCCCGAC
TTCGACCACCGCGGCTGCCGCTTCCGGCACCACCACTTCCACCGCCACCG
CCTCCGCCACCATCGCCACCGTTCCCGCTACAGCCACCGCTTCCGCTACC
GCTACTATCAATAGTCAACCTTCTGCGAACCCTGGTATGACCGCCACCGT
TCCCTCCGGCGGTTCCGATCACCCCTCCGGAATTTGTCACCCCGCGACGC
CTACCCTCGACGATCGTGGTCACGGTCAAGGCGCCGCGGATGGCGGCGTC
GAGTTTGTAGTGGGCAAAGGCGACCGGAATGTTGGGCAGGACTGGCGAAT
CGTGTCTGGAGTGGGGTGGACGAGGCAGATGCTAACGGCGCGGAGAGGCC
AGCGACCGACAGCGTGGGTGGACTTCGAGGAGGCCCGCAAGATCATGCTC
GGCTGGGAGGGGTACAAG
back to top