prot_M-pyrifera_M_contig66457.16118.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66457.16118.1
Unique Nameprot_M-pyrifera_M_contig66457.16118.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length210
Homology
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BLAST of mRNA_M-pyrifera_M_contig66457.16118.1 vs. uniprot
Match: A0A349B4U6_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B4U6_9ACTN)

HSP 1 Score: 59.7 bits (143), Expect = 3.300e-8
Identity = 43/101 (42.57%), Postives = 54/101 (53.47%), Query Frame = 0 
Query:    2 ALFVVAVAVG-FVARPGRTDGAPMDPQSTAPDGARALRTLLD-----RYVDEVTTDGFDETTETVIVLEDGLTSNEDEALEAWVRDGGRLLWLDSRSTFLP 96
            AL V AV VG ++    +T G P+DP STAPDGARA+  LL        +DE+  D  D      +VL+D    +  EAL  WVR GG L+  D  ST  P
Sbjct:    9 ALLVAAVLVGAYLTAARQTQGPPLDPSSTAPDGARAVVELLGALAAVEVLDEIPGDDVD----AALVLQDRFDRDAGEALLDWVRRGGTLVVADVDSTLTP 105
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66457.16118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A349B4U6_9ACTN3.300e-842.57Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.583

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66457contigM-pyrifera_M_contig66457:89..718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66457.16118.1mRNA_M-pyrifera_M_contig66457.16118.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66457 89..718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66457.16118.1 ID=prot_M-pyrifera_M_contig66457.16118.1|Name=mRNA_M-pyrifera_M_contig66457.16118.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
VALFVVAVAVGFVARPGRTDGAPMDPQSTAPDGARALRTLLDRYVDEVTT
DGFDETTETVIVLEDGLTSNEDEALEAWVRDGGRLLWLDSRSTFLPVRPA
AASVASGEAQQVVRGECSIEELGDLSTLAGSDLRLFATDDASAVCFATQA
AGSPGGLAAVAAFPLDAGRVIVVDGGRLVDNEQLGEGDNAAMIVRLATAD
DAHAVAVLHP
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