prot_M-pyrifera_M_contig6643.16114.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6643.16114.1
Unique Nameprot_M-pyrifera_M_contig6643.16114.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length194
Homology
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: D7FX24_ECTSI (Rab8C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX24_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 1.650e-86
Identity = 159/201 (79.10%), Postives = 165/201 (82.09%), Query Frame = 0
Query:    1 TPRRKRTS--GINRERQYDAAVGGG-----GRLSXXXXXXXXXXXXXXXXLSKKTINIVTNLKSHTTGVRSRQEMEELEXXXXXXXXXXXXKENLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            TPRRKRTS  GINRERQ+D  V GG     GR                  LSKKT+NIVTNLKSHTT VRSR+EME+LEXXXXXXXXXXXX ENLRQK  G DFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPT+ISTAGVD+KVQTLDINGKRVRCQIWDTAGQERFHVITR Y RGAHGIAL YDVTDDDSFKNVNYW
Sbjct:   35 TPRRKRTSTSGINRERQFDGTVTGGTGGTGGRFGGGRRRSGPGNGRGG--LSKKTLNIVTNLKSHTTDVRSREEMEDLEXXXXXXXXXXXXXENLRQK--GDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYW 231          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A6H5JLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN2_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 5.320e-85
Identity = 159/202 (78.71%), Postives = 165/202 (81.68%), Query Frame = 0
Query:    1 TPRRKRTS--GINRERQYDAAVGGGGRLSXXXXXXXXXXXXXXXX------LSKKTINIVTNLKSHTTGVRSRQEMEELEXXXXXXXXXXXXKENLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            TPRRKRTS  GINRERQ+D  V GG    XXXX                  LSKKT+NIVTNLKSHTT VRSR+EME+LE  XXXXXXXXXXKENLRQK  G DFD TIRILLLGDSGVGKTSLMTRFSEDKFAPT+ISTAGVD+KVQTLDINGKRVRCQIWDTAGQERFHVITR Y RGAHGIAL YDVTDDDSFKNVNYW
Sbjct:  188 TPRRKRTSTSGINRERQFDGTVTGGTXXXXXXXSRFGRGRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEXXXXXXXXXXKENLRQK--GDDFDRTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYW 387          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A836C8W2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W2_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.220e-50
Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 0
Query:  100 TIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            TIRILLLGDSGVGKTSLM R++ED F+P ++STAGVDFKV+ LDING+RVRCQIWDTAGQE+FHVITRAY RGAHGIALVYDV D DSFKNVNYW
Sbjct:    2 TIRILLLGDSGVGKTSLMLRYTEDHFSPNLLSTAGVDFKVRHLDINGRRVRCQIWDTAGQEKFHVITRAYYRGAHGIALVYDVADADSFKNVNYW 96          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A7S3PN59_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PN59_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.490e-41
Identity = 90/188 (47.87%), Postives = 112/188 (59.57%), Query Frame = 0
Query:   44 LSKKTINIVTNLKSHT-------TGVRSRQEMEE--LEXXXXXXXXXXXX----------------------------KENLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            LSKKT+NIVTNLK            V S++E EE  LE                                         +NL  K  GHD+   +++LLLGDSGVGKTSLM RF++++F  +++STAGVDFKV+ L+ + KRV+CQIWDTAGQERFHVITRAY RG+HGIALVYD T + SFK + YW
Sbjct:   80 LSKKTLNIVTNLKDQVESIGIPVNNVLSQEEFEEEALEAEAVAKAATAANPKASDSGKEKKFNYKSGKATRRTSATKISDNL-MKNEGHDY--YVKVLLLGDSGVGKTSLMLRFADNQFQESLMSTAGVDFKVRFLEKDNKRVKCQIWDTAGQERFHVITRAYYRGSHGIALVYDATRESSFKQIEYW 264          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A7S2SPF5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPF5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.100e-40
Identity = 68/102 (66.67%), Postives = 88/102 (86.27%), Query Frame = 0
Query:   96 DFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLD---INGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            D+D+ +++LLLGDSGVGKTSLM RF++++F P ++STAGVDFKV+ L+     GKR++CQIWDTAGQERFHVITR Y RG+HGIALVYDVT++ SF+ +NYW
Sbjct:  273 DYDYHVKVLLLGDSGVGKTSLMLRFADNEFQPNLMSTAGVDFKVRYLENQKTKGKRIKCQIWDTAGQERFHVITRTYYRGSHGIALVYDVTNERSFEQINYW 374          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A7R9U6W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6W6_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.540e-40
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 0
Query:  102 RILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            R+LLLGDSGVGKTSLM R+SEDKFAP ++STAGVDFK++ + +  KRVR QIWDTAGQE+FHVITR++ +GAHGI LVY VTD DSF NV YW
Sbjct:  126 RLLLLGDSGVGKTSLMLRYSEDKFAPVLLSTAGVDFKMRRVVLRNKRVRLQIWDTAGQEKFHVITRSFYKGAHGICLVYSVTDLDSFNNVRYW 218          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: H2ASH5_KAZAF (Uncharacterized protein n=1 Tax=Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) TaxID=1071382 RepID=H2ASH5_KAZAF)

HSP 1 Score: 144 bits (364), Expect = 3.950e-40
Identity = 63/108 (58.33%), Postives = 86/108 (79.63%), Query Frame = 0
Query:   87 NLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            +L   A G ++D  ++ILL+GDSGVGK+ L+ RF EDKF+P+ I+T G+DFK++T++INGK+++ Q+WDTAGQERF  IT AY RGA GI LVYDVTD+ +F N+N W
Sbjct:    3 HLSASATGKNYDSIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVEINGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANINKW 110          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: Q6CNJ5_KLULA (KLLA0E12079p n=4 Tax=Kluyveromyces TaxID=4910 RepID=Q6CNJ5_KLULA)

HSP 1 Score: 144 bits (363), Expect = 6.260e-40
Identity = 63/99 (63.64%), Postives = 81/99 (81.82%), Query Frame = 0
Query:   96 DFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            ++D  ++ILLLGDSGVGK+ L+ RF EDKF PT I+T G+DFK++T+DINGKRV+ Q+WDTAGQERF  IT AY RGA GI L+YDVTD+ +F+N+  W
Sbjct:   16 NYDSVMKILLLGDSGVGKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDINGKRVKLQLWDTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQW 114          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: W7U9Z1_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9Z1_9STRA)

HSP 1 Score: 146 bits (369), Expect = 7.610e-40
Identity = 69/97 (71.13%), Postives = 86/97 (88.66%), Query Frame = 0
Query:  100 TIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQ--TLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            +IRILLLGDSGVGKTSLM R+SE++FAP ++STAGVDFKV+  TL+ + ++V+ QIWDTAGQER HVITR Y +G+HGIALVY++TD DSF+NVNYW
Sbjct:  105 SIRILLLGDSGVGKTSLMMRYSENEFAPCLLSTAGVDFKVRHLTLEESKRKVKVQIWDTAGQERMHVITRTYYKGSHGIALVYNLTDPDSFRNVNYW 201          
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: C1E6E1_MICCC (Ras-related gtp-binding protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6E1_MICCC)

HSP 1 Score: 143 bits (361), Expect = 8.900e-40
Identity = 63/103 (61.17%), Postives = 81/103 (78.64%), Query Frame = 0
Query:   92 ARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 194
            A    +DH I++LL+GDSGVGK+ L+ RFSED+F  + I+T G+DFK++T++++GKRV+ QIWDTAGQERF  IT AY RGAHGI L YDVTD+ SF NV  W
Sbjct:    3 AGSQQYDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNW 105          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX24_ECTSI1.650e-8679.10Rab8C, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JLN2_9PHAE5.320e-8578.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8W2_9STRA2.220e-5084.21Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A7S3PN59_9STRA1.490e-4147.87Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2SPF5_9STRA1.100e-4066.67Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7R9U6W6_9STRA1.540e-4073.12Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
H2ASH5_KAZAF3.950e-4058.33Uncharacterized protein n=1 Tax=Kazachstania afric... [more]
Q6CNJ5_KLULA6.260e-4063.64KLLA0E12079p n=4 Tax=Kluyveromyces TaxID=4910 RepI... [more]
W7U9Z1_9STRA7.610e-4071.13Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42... [more]
C1E6E1_MICCC8.900e-4061.17Ras-related gtp-binding protein n=1 Tax=Micromonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..91
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 124..140
score: 29.8
coord: 101..122
score: 43.24
coord: 142..164
score: 47.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 101..194
e-value: 7.6E-16
score: 68.6
NoneNo IPR availableGENE3D3.40.50.300coord: 69..194
e-value: 4.5E-39
score: 135.6
NoneNo IPR availablePANTHERPTHR24073:SF567RAS-RELATED PROTEIN RAB-15coord: 95..194
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 95..194
NoneNo IPR availablePROSITEPS51419RABcoord: 96..194
score: 21.407
IPR001806Small GTPasePFAMPF00071Rascoord: 102..194
e-value: 1.0E-33
score: 116.2
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 99..183
e-value: 7.1E-18
score: 62.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 97..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6643contigM-pyrifera_M_contig6643:165..6350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6643.16114.1mRNA_M-pyrifera_M_contig6643.16114.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6643 165..6350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6643.16114.1 ID=prot_M-pyrifera_M_contig6643.16114.1|Name=mRNA_M-pyrifera_M_contig6643.16114.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp
TPRRKRTSGINRERQYDAAVGGGGRLSGGSGRRRAGPGNGRGGLSKKTIN
IVTNLKSHTTGVRSRQEMEELEEEKRLAEEERRFKENLRQKARGHDFDHT
IRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVR
CQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase