mRNA_M-pyrifera_M_contig66034.16034.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: A0A6P8HNL8_ACTTE (Asparagine--tRNA ligase n=4 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HNL8_ACTTE) HSP 1 Score: 253 bits (645), Expect = 1.070e-78 Identity = 113/166 (68.07%), Postives = 136/166 (81.93%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPFRR+ Y +AI LKE++I +EDGT+ EFGEDI E ER + D I EP+FLCRFP+ +K+FYM +C D L++S DLL+PGVGE++GGSMRI DYDELM YKREGID SPYYWF+DQRKYGT PHGG+GLG+ERFLTW+ N HHIR+VCFYPR+ GRC P
Sbjct: 402 PKRPFRRMNYADAIVYLKENDIKKEDGTYYEFGEDIPEMPERKMTDQ-INEPIFLCRFPVEIKSFYMQRCPEDRRLTESVDLLMPGVGEIIGGSMRIWDYDELMEGYKREGIDPSPYYWFSDQRKYGTCPHGGYGLGLERFLTWLLNRHHIRDVCFYPRFVGRCKP 566
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: A0A833Z786_9CHIR (tRNA-synt_2 domain-containing protein n=2 Tax=Microchiroptera TaxID=30560 RepID=A0A833Z786_9CHIR) HSP 1 Score: 245 bits (625), Expect = 1.450e-78 Identity = 108/166 (65.06%), Postives = 134/166 (80.72%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPF+R+ Y +AI LKEHNI +EDGTF EFGEDI E ER++ DT I EP+ LCRFP+ +K+FYM +C D L++S D+L+P VGE+VGGSMRI D DE++A YKREGID +PYYW+TDQRKYG PHGG+GLG+ERFLTW+ N +HIR+VC YPR+ RCTP
Sbjct: 158 PKRPFKRMNYSDAIVWLKEHNIKKEDGTFYEFGEDIPEAPERLMTDT-INEPILLCRFPVEIKSFYMQRCPEDSRLTESVDVLMPNVGEIVGGSMRIWDSDEMLAGYKREGIDPTPYYWYTDQRKYGACPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCTP 322
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: B4DN60_HUMAN (cDNA FLJ52703, highly similar to Asparaginyl-tRNA synthetase, cytoplasmic (EC6.1.1.22) n=1 Tax=Homo sapiens TaxID=9606 RepID=B4DN60_HUMAN) HSP 1 Score: 243 bits (621), Expect = 2.870e-78 Identity = 106/166 (63.86%), Postives = 135/166 (81.33%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPF+R+ Y +AI LKEH++ +EDGTF EFGEDI E ER++ DT I EP+ LCRFP+ +K+FYM +C D L++S D+L+P VGE+VGGSMRI D +E++A YKREGID +PYYW+TDQRKYGT PHGG+GLG+ERFLTW+ N +HIR+VC YPR+ RCTP
Sbjct: 135 PKRPFKRMNYSDAIVWLKEHDVKKEDGTFYEFGEDIPEAPERLMTDT-INEPILLCRFPVEIKSFYMQRCPEDSRLTESVDVLMPNVGEIVGGSMRIFDSEEILAGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCTP 299
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: UPI0005F44DD2 (asparagine--tRNA ligase, cytoplasmic isoform X2 n=2 Tax=Primates TaxID=9443 RepID=UPI0005F44DD2) HSP 1 Score: 244 bits (624), Expect = 9.990e-78 Identity = 107/166 (64.46%), Postives = 135/166 (81.33%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPF+R+ Y +AI LKEH+I +EDGTF EFGEDI E ER++ DT I EP+ LCRFP+ +K+FYM +C D L++S D+L+P VGE+VGGSMR SD +E++A YKREGID +PYYW+TDQRKYGT PHGG+GLG+ERFLTW+ N +HIR+VC YPR+ RCTP
Sbjct: 211 PKRPFKRMNYSDAIIWLKEHDIKKEDGTFYEFGEDIPEAPERLMTDT-INEPILLCRFPVEIKSFYMQRCPEDSCLTESVDVLMPNVGEIVGGSMRTSDAEEILAGYKREGIDPAPYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCTP 375
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: UPI001C4D0840 (asparagine--tRNA ligase, cytoplasmic-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4D0840) HSP 1 Score: 236 bits (602), Expect = 4.810e-77 Identity = 104/166 (62.65%), Postives = 131/166 (78.92%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPF+R+ Y EAIE LKEH+I ++DG++ EFGEDI E ER++ DT I E + LCRFP +K+FYM +C D L++S D+L+P VGE+VGGSMR D +EL+ YKREGID +PYYW+TDQRKYGT PHGG+GLG+ERFLTW+ N HHIR+VC YPR+ RC P
Sbjct: 17 PKRPFKRMDYSEAIEWLKEHDIKKDDGSYYEFGEDIPEAPERLMTDT-INETILLCRFPAEIKSFYMQRCADDRRLTESVDVLMPNVGEIVGGSMRTWDAEELLEGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWLLNRHHIRDVCLYPRFIQRCRP 181
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: U3KB08_FICAL (Asparagine--tRNA ligase n=2 Tax=Ficedula albicollis TaxID=59894 RepID=U3KB08_FICAL) HSP 1 Score: 246 bits (627), Expect = 1.530e-76 Identity = 108/166 (65.06%), Postives = 133/166 (80.12%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPFRR+ Y EAIE LKEH++ +EDGT+ EFGEDI E ER++ DT I EP+ LCRFP +K+FYM +C D L++S D+L+P VGE+VGGSMRI D +EL+ YKREGID +PYYW+TDQRKYGT PHGG+GLG+ERFLTW+ N HHIR+VC YPR+ RC P
Sbjct: 351 PKRPFRRMNYAEAIEWLKEHDVKKEDGTYYEFGEDIPEAPERLMTDT-INEPILLCRFPAEIKSFYMQRCSDDSRLTESVDVLMPNVGEIVGGSMRIWDSEELLGGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRHHIRDVCLYPRFVQRCKP 515
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: A0A852C046_9PICI (SYNC protein (Fragment) n=1 Tax=Ramphastos sulfuratus TaxID=322582 RepID=A0A852C046_9PICI) HSP 1 Score: 238 bits (608), Expect = 1.580e-76 Identity = 104/166 (62.65%), Postives = 131/166 (78.92%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
P+RPFRR+ Y EAI L++H + +EDGT +FGEDI E ER++ DT I EP+ LCRFP +K+FYM +C DP L++S D+L+P VGE+VGGSMRI D +EL+ YKREGID +PYYW+TDQRKYGT PHGG+GLG+ERFLTW+ N HHIR+VC YPR+ RC P
Sbjct: 118 PRRPFRRMDYGEAIAWLQQHGVTKEDGTPYQFGEDIPEAPERLMTDT-INEPILLCRFPAEIKSFYMQRCPEDPRLTESVDVLMPNVGEIVGGSMRIWDSEELLEGYKREGIDPAPYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRHHIRDVCLYPRFVQRCRP 282
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: H3C5H6_TETNG (Protein kinase, DNA-activated, catalytic subunit n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3C5H6_TETNG) HSP 1 Score: 241 bits (614), Expect = 2.150e-76 Identity = 106/166 (63.86%), Postives = 133/166 (80.12%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPFRR+ Y EAIE L+EH+I ++DGTF EFGEDI+E ER++ DT I EP+ LCRFP +K+FYM +C D L++S DLL+P VGEVVGGSMR D +EL+ Y+REGID +PYYW+TDQRKYGT PHGG+G+G+ERFLTW+ N HHI++VC YPR+ RC P
Sbjct: 197 PKRPFRRMNYTEAIEWLREHDIKKDDGTFYEFGEDIREAPERVMTDT-INEPILLCRFPAEIKSFYMQRCSEDKRLTESVDLLMPNVGEVVGGSMRTWDSEELLEGYRREGIDPTPYYWYTDQRKYGTCPHGGYGVGLERFLTWLLNRHHIQDVCLYPRFIQRCRP 361
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: A0A803Y9R6_MELGA (Asparagine--tRNA ligase n=4 Tax=Neognathae TaxID=8825 RepID=A0A803Y9R6_MELGA) HSP 1 Score: 241 bits (616), Expect = 2.280e-76 Identity = 106/166 (63.86%), Postives = 132/166 (79.52%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPFRR+ Y EAIE LKEH++ ++DGT+ EFGEDI E ER + DT I EP+ LCRFP +K+FYM +C D L++S D+L+P VGE+VGGSMRI D +EL+ YKREGID +PYYW+TDQRKYGT PHGG+GLG+ERFLTW+ + HHIR+VC YPR+ RC P
Sbjct: 223 PKRPFRRMNYAEAIEWLKEHDVKKDDGTYYEFGEDIPEAPERFMTDT-INEPILLCRFPAEIKSFYMQRCHDDSRLTESVDVLMPNVGEIVGGSMRIWDSEELLEGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILDRHHIRDVCLYPRFVQRCKP 387
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Match: A0A2K6SK09_SAIBB (Asparagine--tRNA ligase n=49 Tax=Eutheria TaxID=9347 RepID=A0A2K6SK09_SAIBB) HSP 1 Score: 246 bits (628), Expect = 2.400e-76 Identity = 108/166 (65.06%), Postives = 135/166 (81.33%), Query Frame = 1
Query: 1 PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKEPVFLCRFPLALKAFYMPKCESDPILSDSADLLVPGVGEVVGGSMRISDYDELMAAYKREGIDASPYYWFTDQRKYGTFPHGGWGLGVERFLTWVFNDHHIRNVCFYPRYFGRCTP 498
PKRPF+R+ Y +AI LKEHNI +EDGTF EFGEDI E ER++ DT I EP+ LCRFP+ +K+FYM +C DP L++S D+L+P VGE+VGGSMRI D +E++A YKREGID +PYYW+TDQRKYGT PHGG+GLG+ERFLTW+ N +HIR+VC YPR+ RC P
Sbjct: 384 PKRPFKRMNYSDAIVWLKEHNIKKEDGTFYEFGEDIPEAPERLMTDT-INEPILLCRFPVEIKSFYMQRCPEDPRLTESVDVLMPNVGEIVGGSMRIWDSEEILAGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCKP 548 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66034.16034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig66034.16034.1 >prot_M-pyrifera_M_contig66034.16034.1 ID=prot_M-pyrifera_M_contig66034.16034.1|Name=mRNA_M-pyrifera_M_contig66034.16034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp PKRPFRRLPYREAIEMLKEHNICREDGTFVEFGEDIKEREERMLVDTVIKback to top mRNA from alignment at M-pyrifera_M_contig66034:45..887+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig66034.16034.1 ID=mRNA_M-pyrifera_M_contig66034.16034.1|Name=mRNA_M-pyrifera_M_contig66034.16034.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig66034:45..887+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig66034:45..887+ >mRNA_M-pyrifera_M_contig66034.16034.1 ID=mRNA_M-pyrifera_M_contig66034.16034.1|Name=mRNA_M-pyrifera_M_contig66034.16034.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig66034:45..887+ (Macrocystis pyrifera P11B4 male)back to top |