mRNA_M-pyrifera_M_contig65906.16004.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: A0A0B7AEA7_9EUPU (Uncharacterized protein n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7AEA7_9EUPU) HSP 1 Score: 95.5 bits (236), Expect = 3.280e-21 Identity = 49/99 (49.49%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 LSGEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
L G + +F+ FY GE YLKT HG AINYWD VH LY+ MI G+++R++GL W G+I SM+VLL G ++G + SILLN+P+VLLP+
Sbjct: 85 LDGYISNFMGFYFAEGEPYLKTAHGTAINYWDGTVHFALYLAMIALYSKGKSYRNVGLYWVGTILNSMIVLLQGGVAGN--NPFKLSILLNIPYVLLPL 181
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: A0A8J6KBT1_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6KBT1_ELECQ) HSP 1 Score: 93.2 bits (230), Expect = 2.180e-20 Identity = 43/97 (44.33%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
G + F+ FY++ GE YL+T HG+ I WD VH LY+ M+ +I G N++++GL W GS+ SM+V L G + G+Y +V + +LNVP++LLPV
Sbjct: 86 GYISGFMEFYMQEGEPYLRTAHGILICLWDGTVHYLLYLIMLGAIARGENYKTVGLFWLGSLLMSMLVFLPGNVVGKYGTEVRPAFILNVPYLLLPV 182
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: A0A7K7BA25_9AVES (TM6S2 protein (Fragment) n=4 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7BA25_9AVES) HSP 1 Score: 92.8 bits (229), Expect = 3.000e-20 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
G + F Y+ GE +L+T HGV + YWD VH GLY+ M+ ++ R++RSLGL W GS+ S+VV L G L G++S ++ ++LLNVP+V LPV
Sbjct: 86 GFISGFAELYVREGEPFLRTAHGVLLCYWDGTVHHGLYLAMLAAMSQRRSYRSLGLFWLGSVMMSIVVFLLGNLLGKHSSELSAAVLLNVPYVALPV 182
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: UPI0011C45A41 (transmembrane 6 superfamily member 2 isoform X1 n=2 Tax=Calypte anna TaxID=9244 RepID=UPI0011C45A41) HSP 1 Score: 92.8 bits (229), Expect = 3.080e-20 Identity = 43/97 (44.33%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
G + F+ FY+ GE +L+T HG+ I YWD VH GLY+ MI +I +++R+LGL W GS+ S+ V L G L G+YS ++ ++LLN+P++L+P+
Sbjct: 88 GFISGFVEFYIREGEPHLRTAHGIMICYWDGIVHYGLYLTMIVAIGQRKSYRNLGLFWLGSLVMSITVFLLGNLIGKYSSELSPALLLNLPYILIPL 184
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: A0A814GJV7_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814GJV7_9BILA) HSP 1 Score: 92.8 bits (229), Expect = 4.280e-20 Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 31 FYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRN----WRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
FYLE GE YLKT HG+ INYWD VH LY+ M++ IL + +R L L W GSI SM+VLLGGA +GQ+ + S LLN+P+ + P+
Sbjct: 137 FYLEQGEVYLKTSHGLFINYWDGTVHYTLYLIMLYCILKKQTNKKFYRFLSLFWCGSILNSMIVLLGGAAAGQFGTHIKPSYLLNIPYAMFPL 229
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: UPI001403C62C (transmembrane 6 superfamily member 1-like n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403C62C) HSP 1 Score: 92.8 bits (229), Expect = 4.530e-20 Identity = 42/97 (43.30%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
G + F+TFY++ GE YL++ +G+ I YWD VH LY+ MI +I G N+RS+GL W GS+ S++ LL G G++ ++ + LLN+P+VL+P+
Sbjct: 141 GYIKGFMTFYMKEGEPYLRSAYGIVICYWDGTVHYVLYLTMIGAITLGWNYRSVGLYWLGSLVMSLITLLLGTSVGKFGSEIRPAFLLNIPYVLIPI 237
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: UPI001B88A1D9 (transmembrane 6 superfamily member 1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A1D9) HSP 1 Score: 92.0 bits (227), Expect = 6.080e-20 Identity = 42/96 (43.75%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLP 294
G + +F+TFYL+ GE YLKT HG I YWD +H LY+ ++ +I G+++R + L W GS+ +SM+VL+ L G + V W +LLN+PF+++P
Sbjct: 87 GLIENFMTFYLKEGEPYLKTAHGTMICYWDGVIHYALYLMILAAISWGQSYREVALYWVGSLAHSMLVLMPAILMGPHG--VKWPVLLNIPFLIIP 180
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: UPI001458C4BC (transmembrane 6 superfamily member 1-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001458C4BC) HSP 1 Score: 92.0 bits (227), Expect = 7.810e-20 Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
G + SF+ FYL GE YLKT HG INYWD VH GLYI+++ +R GL W GSI S++++L L G+Y V W ILLN P++ +PV
Sbjct: 89 GIIHSFMAFYLLEGEPYLKTTHGTFINYWDAAVHFGLYIYILKQDAYNEKYRKAGLYWVGSITNSLLLILISGLIGEYG--VRWPILLNTPYLCIPV 183
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: UPI0009A46D89 (transmembrane 6 superfamily member 2-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A46D89) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-19 Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
G + F+ FYL+ GE YL++ +G+ I YW+ VH LY+ MI +I G +RS+GL W GSI S+V LL G + G+Y ++ +ILLN+P++L+P+
Sbjct: 88 GYIKGFMGFYLKEGEPYLRSAYGILICYWNGTVHYALYLMMITAISLGWTYRSVGLYWVGSILMSLVTLLVGTVIGKYGTEIRPAILLNIPYMLIPI 184
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Match: UPI001CFBCF1F (transmembrane 6 superfamily member 1-like isoform X1 n=2 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBCF1F) HSP 1 Score: 90.9 bits (224), Expect = 1.740e-19 Identity = 40/97 (41.24%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 7 GEMFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRSLGLLWFGSIGYSMVVLLGGALSGQYSDQVHWSILLNVPFVLLPV 297
G + F++FY++ GE YL+T +GV YWD VH LY+ +I +I G+N+R GL W GSI SM+VL+ G++ G++ + ++LLN+P++ +P+
Sbjct: 86 GFISGFMSFYMKEGEPYLRTSYGVMACYWDGSVHYILYLMLISAIGQGKNYRHTGLYWLGSIMTSMLVLIPGSVIGKFGSLIRPAVLLNIPYIFIPI 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65906.16004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65906.16004.1 >prot_M-pyrifera_M_contig65906.16004.1 ID=prot_M-pyrifera_M_contig65906.16004.1|Name=mRNA_M-pyrifera_M_contig65906.16004.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp MFSFLTFYLENGEKYLKTPHGVAINYWDFFVHGGLYIFMIHSILSGRNWRback to top mRNA from alignment at M-pyrifera_M_contig65906:146..442- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65906.16004.1 ID=mRNA_M-pyrifera_M_contig65906.16004.1|Name=mRNA_M-pyrifera_M_contig65906.16004.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig65906:146..442- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65906:146..442- >mRNA_M-pyrifera_M_contig65906.16004.1 ID=mRNA_M-pyrifera_M_contig65906.16004.1|Name=mRNA_M-pyrifera_M_contig65906.16004.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig65906:146..442- (Macrocystis pyrifera P11B4 male)back to top |