mRNA_M-pyrifera_M_contig65901.16001.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: A0A0V0QQJ3_PSEPJ (Uncharacterized protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QQJ3_PSEPJ) HSP 1 Score: 117 bits (293), Expect = 3.140e-26 Identity = 70/203 (34.48%), Postives = 109/203 (53.69%), Query Frame = 1
Query: 13 IRYPVEMSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKFSELNASSSESCISFQ----SKYCTDEENIS-----RVTFPIDILESGARNTISGTMRFVNPRISFDSIVSLKASLQLGDIHNPDSTLKTIQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMIWNVSYYNGINYSY 594
+RYPV++S V A S+ +API + ++NIS K IG + F L F + + + F+ +K+ D E V P+ ++E SGT++F NP + S ++LK L LG I + D +TIQ +LQL E+Y +NP+A F+LV+NSET KE + W+ ++G A +WNV+ Y G +S+
Sbjct: 281 VRYPVQISRVIIAPSVKQGEEAPIVIGLKNISNKQIGLNSNFKSRLLRVFLKYESGVKDVKFKFKDQQHNKFEDDMEKFDFDKFIDVDLPVSVIEPQQEIYFSGTLQFSNPDTAPYSKINLKFDLDLGHIDSMDKEFQTIQTNTCSLQLTETYQYNPNALFLLVINSETNKECIDNWKKFAGQIGTTASVWNVANYGGFLFSH 483
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: L8GUI2_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUI2_ACACA) HSP 1 Score: 118 bits (296), Expect = 3.550e-26 Identity = 89/292 (30.48%), Postives = 148/292 (50.68%), Query Frame = 1
Query: 13 IRYPVEMSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKFSELNASSSESCISFQSKYCTDEENISRVTFPIDILESGARNTISGTMRFVNPRISFDSIVSLKASLQLGDIH--NPDSTLKTIQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMI-WNVSYYNGINYSYQREGSQSFISELMNKTVIFLNNLSTANENDEKIRATDFLAQSEILEAAISHNISAYIIGG--EPDMSSMVIPFTDRAPKLYDTCEELISAQKEIE 873
+++PV +S V +IT +AP+ V+NIS + IG++ P + +E N + + F+++ + + + LE GA ISGTM F N + L A L+L + N D L+ IQ+R+F+LQLAE Y + D +LV N+ T E V W LA +GL + WN+S Y G++++Y+R + I ++ K VIFLNN T D K TD A+ E+ I Y++G + + ++PF ++ Y + +E+++ ++E E
Sbjct: 369 VQFPVLISAVEGLRTITMEEEAPVTFSVKNISNQPIGSKCGRPVEAYLGIAE-NFKLQTNDMVFRNRKGKVRPFLEGLLKQVKRLEPGALTYISGTMAFNNEDLPAYVHGDLTAYLKLSGMRPENRDQ-LRCIQQRLFSLQLAEPYRAKENVDVLLVTNTNTTHEEVKAWERLLANVGLPNVTSWNLSLYEGVSFTYRRLDGGTLIEDMKGKLVIFLNNNYTRGAEDSKEAITDLPAR-ELYLLVRDAGIRTYVVGQFISDVLQNRILPFPEKTQSDYVSVKEVLTRRREDE 657
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: Q237Q1_TETTS (Uncharacterized protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q237Q1_TETTS) HSP 1 Score: 109 bits (273), Expect = 3.820e-23 Identity = 79/282 (28.01%), Postives = 129/282 (45.74%), Query Frame = 1
Query: 13 IRYPVEMSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKF--------------------SELNASSSESCISFQSKYCTDEENISRVTFPID-----ILESGARNTISGTMRFVNPRISFDSIVSLKASLQLGDIHNPDSTLKTIQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMIWNVSYYNGINYSYQREGSQSFISELMNKTVIFLNN----LSTANENDEKIRATDFLAQSEILEAAISHNISAYIIG 771
IRYPVE+S + SI +APIA + N+S+K IG RLL ++ E S ++ +S+ S + + + +D L + ISGT++FV+ +++++ + L LG HN + +TIQ R F +QL++ Y +++++L+VNSETK+ + Q + G IWN+S Y G N+ Y +SF NK +I L N ++ A N A + + I + H I YI+G
Sbjct: 376 IRYPVELSEIQVLRSIQLKEEAPIAFSIANLSSKPIGFETISKRLLNIRVVLNNTSYVAQFYPKAIIDQDKERRNSLEKANLSYSSDNYINPQPQDNINILLDQEFVTSLMPNEKKIISGTIKFVDLDLAYNTNYEMSVHLDLGYYHNQQNLYQTIQTRKFAIQLSQPYENKENSEYLLIVNSETKRALIEQIKQFAYSFGSHVDIWNISNYQGFNFDYVGNADKSFKELYKNKVIIVLCNDYKLINGATHN-----AVKQIGEKNIYNSIKFHQIQYYILG 652
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: A0A2P6NKX9_9EUKA (PH domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NKX9_9EUKA) HSP 1 Score: 105 bits (261), Expect = 1.530e-21 Identity = 84/292 (28.77%), Postives = 145/292 (49.66%), Query Frame = 1
Query: 7 IAIRYPVEMSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKFSELNASSSESCISFQSKYCTDEENISRVTFPIDILESGARNTISGTMRFVNPRISFDSIVSLKASLQLGDIHNPDSTL-KTIQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGL-QAMIWNVSYYNGINYSYQREGSQSFISELMNKTVIFLNNLSTANENDEKIRATDFLAQSEILEAAISHNISAYIIGG-EP-DMSSMVIPFTDRAPK--LYDTCEELISAQK 864
I IR+PV+ S++ A I+ +API + NISTK+IG S + C+ S +T + E T T++ +N + + + + ++L LG H D + + IQ+R F +QLAE+YV +P ADF+LVVN+ T WR+ + + ++WN++ Y +N S+ + S + ++ K +IFLNN T +E + ++ + ++ E AA + I+ +I G EP D+ S +IP+ RA + LY T +L ++ +
Sbjct: 413 IVIRHPVQSSIIRGATCISRTEEAPIVFSIDNISTKSIGINN-------------GMSKDDVCLRNSDGIVCRNNLFSELTRLLP--EQSTHFTC--TLQCINSNVMPYTRMKVVSTLYLG--HVRDMLIPRPIQQREFEVQLAETYVPDPSADFLLVVNNRTTLAEAEAWRDVIRTYFFGKVVVWNINLYEDLNLSHTKRDGTSLLQDMRGKNIIFLNNQVTVHEEETEMSGS-YMRSKEFYLAARDYGINTFIFGEKEPIDVKSEMIPWLPRASRVVLYKTKRDLFTSME 684
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: UPI0011AF3000 (hypothetical protein n=1 Tax=Endozoicomonas acroporae TaxID=1701104 RepID=UPI0011AF3000) HSP 1 Score: 103 bits (256), Expect = 5.190e-21 Identity = 83/297 (27.95%), Postives = 138/297 (46.46%), Query Frame = 1
Query: 25 VEMSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKF-SELNASSSESC-ISFQSKYCTDEENISRVTFPIDILESGARNTISGTMRFVNPRISFDSIVSLKASLQLGDIHNPDSTLKT--IQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMIWNVSYYNGINYSYQREGSQS-------------------------FISELMNKTVIFLNNLSTANENDEKIRATDFLAQSEILEAAISHNISAYIIGGEPDMSSMVIPFTDRAPKL 828
+ + + + SI+ NA+A ++++V NIS+KA+G + RLL + F ++ N + S ++F S+ +T ID L + +SG++ F +P S V+L A L+LG + P T + RVF +QLAE Y ++PDADF+LV N++T QW+ LGL WN S NGI+ ++ + ++ + +KT++FLNN T + + DF + S + +YI+G +P + P D A L
Sbjct: 1 MNLDTIEGSKSISRNAEALLSVKVNNISSKALGLQCRQQRLLKLNFKADTNNDQTRSADLTFYSRDGVPFSGNQGLTKSIDDLPPYGQGGLSGSIAFKDPAQPLYSKVTLFAELELGRLDCPTDHQLTEVVHRRVFEVQLAEGYQYDPDADFLLVTNADTSLPEWNQWKTLANRLGLTFATWNSSLNNGISLFHELQSRETEEHPAVETDTAPLPATGVHADTGVTLVDHFKDKTIVFLNNDDTCVKT---LPPCDFFRSA-------SSGVRSYIVGPKPVREDLFYPEKDLAENL 287
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: L8HIL1_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HIL1_ACACA) HSP 1 Score: 80.9 bits (198), Expect = 3.520e-14 Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 394 LKTIQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMI-WNVSYYNGINYSYQREGSQSFISELMNKTVIFLNNLSTANENDEKIRATDFLAQ 717
L+ IQ+R+F+LQLAE Y + D +LV N+ T E V W LA +GL + WN+S Y G++++Y+R + I ++ K VIFLNN T D K TD A+
Sbjct: 33 LRCIQQRLFSLQLAEPYRAKENVDVLLVTNTNTTHEEVKAWERLLANVGLPNVTSWNLSLYEGVSFTYRRLDGGTLIEDMKGKLVIFLNNNYTRGAEDSKEAITDLPAR 141
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: A0A7S4KR36_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KR36_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 6.450e-13 Identity = 41/149 (27.52%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 388 STLKTIQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMIWNVSYYNGINYSYQREGSQSFISELMNKTVIFLNNLSTANENDEKIRATDFLAQSEILEAAISHNISAYIIG---------GEPDMSSMVIPF 807
+ L IQ F +QL + Y FNP+AD++LV+N +T +E V W ++ G + WN+S + S ++ + + +T+I LNN + + +L +E+L A+ + ++ YI+G G PD +S ++P+
Sbjct: 1 TNLHPIQIMPFRVQLGQYYSFNPEADYLLVINYKTTEEEVHSWTELISSFGGKMNCWNISLEGDFSLSLPYAPNRCLLKDFSCRTIIILNNSIDPSVSSGHTYPFHYLRPTELLTASRDYGVTLYIVGSRVGSRASMGHPDFASHLVPY 149
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: A0A292Q240_9PEZI (Uncharacterized protein n=1 Tax=Tuber aestivum TaxID=59557 RepID=A0A292Q240_9PEZI) HSP 1 Score: 71.6 bits (174), Expect = 2.940e-10 Identity = 61/233 (26.18%), Postives = 107/233 (45.92%), Query Frame = 1
Query: 7 IAIRYPVEMSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKFSELNASSSESCISFQSKYCTDEENI--SRVTFPIDILESGARNTISGTMRFVNPRISFDSIVSLKASLQLGDIHNPD----------STLKTIQERVFTLQLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMIWNVSYYNGI---NYSYQREGSQSFISELMNKTVIFLNN 660
I I YP+E+ + +S+ + + ++N+STK+ G R R SE + + + DE + +R +D L+ G TI T + V+ + S S+ L L + N + S ++++ +Q++ Y +NP AD++L+VN++TK+E + Q +A+LGLQ IWN+S Y N + F + M K++I L N
Sbjct: 331 INISYPLELEAPRFLNSVERGSNVTFSWMLKNVSTKSYGIRGSLGRRAGTCLSENGGTRIFAFV--------DESGVGDARGLDLLDTLDPGTAVTIRQTFK-VSDQAEPYSTGSMTLELVLSEPGNNEGRFSPLESAHSQMRSVMHYPLDMQISAKYTYNPAADYLLIVNADTKREVIHQICGLVADLGLQLDIWNMSVYGNFRDPNCTIPENADHVFYN-YMGKSIIVLAN 553
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Match: A0A2T6ZCT6_TUBBO (Uncharacterized protein n=2 Tax=Tuber TaxID=36048 RepID=A0A2T6ZCT6_TUBBO) HSP 1 Score: 71.6 bits (174), Expect = 2.990e-10 Identity = 56/201 (27.86%), Postives = 95/201 (47.26%), Query Frame = 1
Query: 7 IAIRYPVEMSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKFSELNASSSESCISFQSKYCTDEENI--SRVTFPIDILESGARNTISGTMRFVNPRISFDSIVSLKASLQLGDIHNPDSTLKTIQERVFTL----------QLAESYVFNPDADFVLVVNSETKKETVLQWRNQLAELGLQAMIWNVSYY 573
I I YP+E+ + +S+ + + ++N+STK+ G R R SE + + + DE N+ +R +D L+ G TI T + V+ + S S+ L L + N + ++ F + Q++ Y +NP AD++LVVN++TK+E + Q +A+LGLQ IWN+S Y
Sbjct: 405 INISYPLELEAPRFLNSVERGSNVTFSWMLKNVSTKSYGIRGSLGRSAGTCLSENGGARVFTFV--------DESNMGDARGLDLLDTLDPGTAVTIRQTFK-VSDQAEPYSTGSMTLELVLSEPGNNEGRYSPLESAHFPMRSVMHYPLDMQISAKYTYNPAADYLLVVNADTKREVIHQICGLVADLGLQLDIWNMSVY 596 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65901.16001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65901.16001.1 >prot_M-pyrifera_M_contig65901.16001.1 ID=prot_M-pyrifera_M_contig65901.16001.1|Name=mRNA_M-pyrifera_M_contig65901.16001.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp MSLVSYAHSITTNAKAPIALQVRNISTKAIGARAEFPRLLTVKFSELNASback to top mRNA from alignment at M-pyrifera_M_contig65901:20..892+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65901.16001.1 ID=mRNA_M-pyrifera_M_contig65901.16001.1|Name=mRNA_M-pyrifera_M_contig65901.16001.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=873bp|location=Sequence derived from alignment at M-pyrifera_M_contig65901:20..892+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65901:20..892+ >mRNA_M-pyrifera_M_contig65901.16001.1 ID=mRNA_M-pyrifera_M_contig65901.16001.1|Name=mRNA_M-pyrifera_M_contig65901.16001.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1686bp|location=Sequence derived from alignment at M-pyrifera_M_contig65901:20..892+ (Macrocystis pyrifera P11B4 male)back to top |