mRNA_M-pyrifera_M_contig65694.15959.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A7K1ZBI5_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBI5_9ACTN) HSP 1 Score: 370 bits (950), Expect = 2.510e-126 Identity = 168/210 (80.00%), Postives = 188/210 (89.52%), Query Frame = 1
Query: 1 WGTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEGAFDAPSYD 630
WGTKDRSWGIRPLIGGDTRGAPQPPR GG LFFLWAP+NF+D+C+HYQLFED+KGRPLFNVGA LPVY++P D+PGVED+ A HMR LEH+LTFK G RM+ +ATIAMTSID G+RHEV +EPIFT+RMKGIGYMHPKWVHGQWHGEL MESESW+L +VDE AYENQHVQHLV A YGDR GIGVLEQV++GPY PY LEG + APSYD
Sbjct: 170 WGTKDRSWGIRPLIGGDTRGAPQPPREGG-LFFLWAPINFEDMCIHYQLFEDFKGRPLFNVGAILPVYESPDDIPGVEDETASHMRNLEHKLTFKSGIRMVNDATIAMTSIDDGKRHEVHLEPIFTFRMKGIGYMHPKWVHGQWHGELEMESESWSLDEVDEMAYENQHVQHLVWATYGDRRGIGVLEQVMLGPYRPYGLEGGWQAPSYD 378
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A2E8L7N6_9ACTN (Uncharacterized protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L7N6_9ACTN) HSP 1 Score: 332 bits (850), Expect = 4.480e-111 Identity = 159/214 (74.30%), Postives = 175/214 (81.78%), Query Frame = 1
Query: 4 GTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGD-----RVGIGVLEQVIMGPYTPYRLEGAFDAPSYD 630
GTKDRSWG+RPLIGGDTRGAP + GG +FFLWAPLNFDDLCLHYQLF+D GRPLF VGARLPVY +P +LPGVED A EHMR LEH++TF G+RMI ATIAMTS+ G RHEVR+EPIFT+RMKGIGY HP WVHG+WH ELAM SESWAL DVD+TAYENQH QHLVRA Y D R GIGVLEQ I+GPY PY LEG F AP+YD
Sbjct: 171 GTKDRSWGVRPLIGGDTRGAPAASQMGG-IFFLWAPLNFDDLCLHYQLFDDNVGRPLFQVGARLPVYGSPDELPGVEDPAVEHMRNLEHEVTFASGNRMIAGATIAMTSVADGARHEVRLEPIFTFRMKGIGYTHPIWVHGKWHDELAMASESWALDDVDDTAYENQHCQHLVRATYTDGAGVERTGIGVLEQNILGPYAPYGLEGFFAAPTYD 383
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A2E5P272_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A2E5P272_9ACTN) HSP 1 Score: 297 bits (760), Expect = 2.920e-97 Identity = 134/201 (66.67%), Postives = 162/201 (80.60%), Query Frame = 1
Query: 4 GTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEG 606
GTKDRSWGIRPL GGD RGAP +A LFFLWAPLNFDDLC HYQLFED +GRPL +VGA +P Y+T DLPG+ED A HMR+ EH+L F+EGSRM++ A +A +++D G RHEVR+E +FT+RMKGIGY HP+W HG W GELAM+ E W LA+VD+ A+ENQH QH+VRA GDRVG+GVLEQ+++GPY PY LEG
Sbjct: 191 GTKDRSWGIRPLAGGDPRGAPAS-QARNSLFFLWAPLNFDDLCFHYQLFEDAQGRPLSSVGALMPTYNTLTDLPGIEDPATRHMRSHEHRLEFEEGSRMVRSANLAFSAVDDGSRHEVRLEKLFTFRMKGIGYHHPEWGHGAWKGELAMDGERWDLAEVDDQAFENQHCQHVVRATLGDRVGLGVLEQLVVGPYLPYGLEG 390
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A6L8JL25_9ACTN (Uncharacterized protein n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L8JL25_9ACTN) HSP 1 Score: 296 bits (758), Expect = 3.150e-97 Identity = 141/208 (67.79%), Postives = 158/208 (75.96%), Query Frame = 1
Query: 1 WGTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEGAFDAPS 624
+GTKDRSWG+RP+ GGD RGAPQ PRA G LFFLWAPL++DD+C HYQLFED GRP F+VGA LP Y++ AD P VED E M LEH L F+ GSRMIK AT+AMTS++ RHE+ E FTYRMKGIGY HP W HG W GELAMESE W LADVDETA+ENQHVQHL++ GDR GIGVLEQ I GPY PY LEG PS
Sbjct: 170 YGTKDRSWGVRPVAGGDNRGAPQAPRAMG-LFFLWAPLHWDDMCSHYQLFEDTLGRPRFHVGAFLPTYESLADNPAVEDPGVEPMHRLEHHLEFESGSRMIKSATLAMTSLEDDTRHEITFEKQFTYRMKGIGYSHPTWSHGDWKGELAMESERWKLADVDETAFENQHVQHLMKVRMGDRQGIGVLEQSIYGPYRPYGLEGHIAPPS 376
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A2E5NUK1_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NUK1_9ACTN) HSP 1 Score: 293 bits (749), Expect = 7.500e-96 Identity = 137/202 (67.82%), Postives = 155/202 (76.73%), Query Frame = 1
Query: 1 WGTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEG 606
WGTKDRSWGIRPL GGD RGAP PP A LFFLWAPLNFDDLC+HYQLFED +G PLF+VGA LP YD DLPG+ED AA HMR EH+L F EGSR+ A +A T+++ G RHEV +E IFT+RMKGIGY HP+W HG W GELAM ESW L DVD+ A+ENQH QHLV A GDRVGIG LEQ+ +GPY PY +G
Sbjct: 171 WGTKDRSWGIRPLDGGDRRGAPVPP-ATKSLFFLWAPLNFDDLCVHYQLFEDSEGGPLFSVGALLPTYDRLDDLPGIEDPAARHMRGHEHRLQFDEGSRLAHTADLAFTAVNDGSRHEVHLERIFTFRMKGIGYHHPEWGHGAWKGELAMAVESWNLEDVDDLAFENQHCQHLVTATMGDRVGIGALEQLFVGPYLPYGFDG 371
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A2E2WYQ7_9ACTN (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A2E2WYQ7_9ACTN) HSP 1 Score: 291 bits (744), Expect = 4.150e-95 Identity = 134/201 (66.67%), Postives = 158/201 (78.61%), Query Frame = 1
Query: 4 GTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEG 606
GTKDRSWGIRPL GGD RGAP PP A LFFLWAPLNF+D+C+HYQLFED GRPL +VGA LP YDT DLPG+ED AA HMR+ EH+L F++ SRM+ A +A ++D G RHE +E I T+RMKGIGY HP+W HG W G+LAM SESW +ADVD+ A+ENQH QHL+RA GDRVGIGVLEQ+ +GPY PY +EG
Sbjct: 171 GTKDRSWGIRPLDGGDRRGAPAPP-ARNSLFFLWAPLNFEDMCVHYQLFEDSLGRPLSSVGALLPTYDTLDDLPGIEDPAARHMRSHEHRLQFEDDSRMVHTADLAFVAVDDGTRHEFHLEKISTFRMKGIGYHHPEWGHGAWKGDLAMASESWVMADVDDQAFENQHCQHLMRATMGDRVGIGVLEQLFVGPYEPYGMEG 370
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A3D5K668_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K668_9ACTN) HSP 1 Score: 285 bits (730), Expect = 5.460e-93 Identity = 133/201 (66.17%), Postives = 153/201 (76.12%), Query Frame = 1
Query: 4 GTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEG 606
GTKDRSWGIRPL GGD RGAP PP A LFFLWAPLNFDDLC+HYQLFED GRPL +VGA LP YDT ADLPG+ED A HMRA EH+L F GSR+ A ++ T++D G HE +E IFT+RMKGIGY HP+W HG W G+LAM SE W + VD+ A+ENQH QHL+RA GDRVGIGVLEQ+ +GPY PY +G
Sbjct: 171 GTKDRSWGIRPLAGGDQRGAPVPP-ARSSLFFLWAPLNFDDLCVHYQLFEDSLGRPLSSVGALLPTYDTLADLPGIEDPGARHMRAHEHRLQFDAGSRLAHTADLSFTAVDDGSHHEFHLERIFTFRMKGIGYHHPEWGHGAWKGDLAMASEKWDMDAVDDQAFENQHCQHLMRAAMGDRVGIGVLEQLCVGPYKPYGFDG 370
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A2E4SWY8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4SWY8_9ACTN) HSP 1 Score: 284 bits (727), Expect = 1.550e-92 Identity = 133/201 (66.17%), Postives = 152/201 (75.62%), Query Frame = 1
Query: 4 GTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEG 606
GTKDRSWGIRPL GGD RGAP PP LFFLWAPLNFDDLC+HYQLFED GRPL +VGA +P YD DLPG+ED AA HMRA EH+L F GSR+ A ++ T++D G RHE +E IFT+RMKGIGY HP+W HG W GELAM SE W + VD+ A+ENQH QHL+RA GDRVGIGVLEQ+ +GPY PY EG
Sbjct: 171 GTKDRSWGIRPLDGGDRRGAPAPPDRSS-LFFLWAPLNFDDLCVHYQLFEDSLGRPLSSVGALMPTYDALDDLPGIEDPAARHMRAHEHRLQFDAGSRLAHSADLSFTAVDDGSRHEFHLERIFTFRMKGIGYNHPEWGHGAWKGELAMASEKWDVDTVDDQAFENQHCQHLMRATLGDRVGIGVLEQLCIGPYKPYGFEG 370
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A2D9PU49_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D9PU49_9ACTN) HSP 1 Score: 283 bits (725), Expect = 3.120e-92 Identity = 131/201 (65.17%), Postives = 155/201 (77.11%), Query Frame = 1
Query: 4 GTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEG 606
GTKDRSWG RPL GGD RGAP PP A LFFLWAPLNF+D+C+HYQLFED GR L +VGA LP YDT DLPG+ED AA HM + EH+L F++ SRM+ A +A ++D G RHE +E I T+RMKGIGY HP+W HG W G+LAM SESW +ADVD+ A+ENQH QHL+RA GDRVGIGVLEQ+ +GPY PY +EG
Sbjct: 171 GTKDRSWGXRPLDGGDRRGAPAPP-ARNSLFFLWAPLNFEDMCVHYQLFEDSLGRXLSSVGALLPTYDTLDDLPGIEDPAARHMXSHEHRLQFEDDSRMVHTADLAFVAVDDGTRHEFHLEKISTFRMKGIGYHHPEWGHGAWKGDLAMASESWVMADVDDQAFENQHCQHLMRATMGDRVGIGVLEQLFVGPYEPYGMEG 370
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Match: A0A2E9XEQ7_9ACTN (Uncharacterized protein n=8 Tax=Bacteria TaxID=2 RepID=A0A2E9XEQ7_9ACTN) HSP 1 Score: 278 bits (712), Expect = 3.070e-90 Identity = 133/207 (64.25%), Postives = 154/207 (74.40%), Query Frame = 1
Query: 4 GTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFEDWKGRPLFNVGARLPVYDTPADLPGVEDDAAEHMRALEHQLTFKEGSRMIKEATIAMTSIDSGERHEVRIEPIFTYRMKGIGYMHPKWVHGQWHGELAMESESWALADVDETAYENQHVQHLVRAYYGDRVGIGVLEQVIMGPYTPYRLEGAFDAPS 624
GTKDRSWGIRPL GGD RGAP P+AGG LFFLWAPL+FDD C HYQLFED KGR LF+VGA LPVYD+ LPGVED H R LEH+L+F SRMI+ +AMT I+SG R + E +FT+RMKGIGY H +W HG W ++A+ SE W +ADVD+TA+ENQHVQHL+R G GIGVLEQ I+GPY PY LEGA PS
Sbjct: 171 GTKDRSWGIRPLAGGDRRGAPALPQAGG-LFFLWAPLHFDDFCAHYQLFEDTKGRTLFSVGALLPVYDSIDALPGVEDPTVTHCRNLEHKLSFASDSRMIESVELAMTEIESGNRVSIDFEKLFTFRMKGIGYSHSEWGHGMWKDDVAIGSEQWDIADVDDTAFENQHVQHLMRVKIGGNEGIGVLEQNILGPYEPYGLEGAIRPPS 376 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65694.15959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65694.15959.1 >prot_M-pyrifera_M_contig65694.15959.1 ID=prot_M-pyrifera_M_contig65694.15959.1|Name=mRNA_M-pyrifera_M_contig65694.15959.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp WGTKDRSWGIRPLIGGDTRGAPQPPRAGGGLFFLWAPLNFDDLCLHYQLFback to top mRNA from alignment at M-pyrifera_M_contig65694:3..635+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65694.15959.1 ID=mRNA_M-pyrifera_M_contig65694.15959.1|Name=mRNA_M-pyrifera_M_contig65694.15959.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig65694:3..635+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65694:3..635+ >mRNA_M-pyrifera_M_contig65694.15959.1 ID=mRNA_M-pyrifera_M_contig65694.15959.1|Name=mRNA_M-pyrifera_M_contig65694.15959.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig65694:3..635+ (Macrocystis pyrifera P11B4 male)back to top |