mRNA_M-pyrifera_M_contig65611.15947.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig65611.15947.1
Unique NamemRNA_M-pyrifera_M_contig65611.15947.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: A0A2E0RLW7_9ACTN (Cytochrome-c3 hydrogenase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RLW7_9ACTN)

HSP 1 Score: 738 bits (1905), Expect = 8.140e-266
Identity = 339/403 (84.12%), Postives = 371/403 (92.06%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVGESYQ GVVLS KPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEV+RSIAILENW  AW+E QWLGCSV+RWLEN+TWDDVLAWVDENE+Q+DSDCGFFIRYC+DVGLD+YGQGVGNY+ATGTYF P LYENP IE RN AL+ RSGVY NG++S+FDH+RV+EDTAHSFY+GSGLLHPW+G T PIDP  G K+ KYSWAKSPRYDV G G+VPLEAGPLARR+AAAAP A PHQD DPLFLDIM+R+GPSVM RQLARMHEGPKY++W R+WLDELDLQ SFYTKP+EH SGKGFG+TEAARGSL+DWIVIEDGKIANYQVITPTAWNIGPRDG G+LGPIE+ALVGAPI D  DPVELG VARSFDSCLVCTVHAYDGKTGK+LSKFV+NGMV
Sbjct:  133 RRFAPYVGESYQTGVVLSQKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVSRSIAILENWNRAWLEGQWLGCSVDRWLENKTWDDVLAWVDENEAQYDSDCGFFIRYCMDVGLDTYGQGVGNYLATGTYFDPGLYENPTIEGRNAALMGRSGVYVNGQFSEFDHMRVAEDTAHSFYEGSGLLHPWEGRTVPIDPADGAKQDKYSWAKSPRYDVEGVGHVPLEAGPLARRIAAAAPDAAPHQDDDPLFLDIMSRIGPSVMTRQLARMHEGPKYYKWARQWLDELDLQGSFYTKPIEHESGKGFGSTEAARGSLSDWIVIEDGKIANYQVITPTAWNIGPRDGAGSLGPIEQALVGAPIVDTSDPVELGHVARSFDSCLVCTVHAYDGKTGKELSKFVINGMV 535          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: A0A5Q4FV68_9ACTN (Cytochrome-c3 hydrogenase n=1 Tax=Nitriliruptor sp. TaxID=2448056 RepID=A0A5Q4FV68_9ACTN)

HSP 1 Score: 706 bits (1822), Expect = 3.610e-253
Identity = 323/404 (79.95%), Postives = 360/404 (89.11%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPI-DPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVG SYQ GV LSGKPVEVYA++GGQWPHSSFM+PGGVMC P LA+VTRSIAILE WK AW+E  WLGCSVERW+ENETWDDVLAW+DE+ES ++SDCGFFIRYC+DVGLDSYGQGVGNYIATGTYFQP+LY NP I+ RNDALI R GVYANGE+SDFDHLRV ED  HSF++G+G LHPW+G T P+ DPE  +++GKYSWAKSPRYDVPGQGYVPLEAGPLARR+AAA P  G HQD DPLF DIM RLGPSVM RQLARMHEGPKY+QW R+WLD++DLQ+SFYTKPVEH SGKGFG+TEAARGSL+DWIVIED KIANYQV+TPTA+NIGPRDG+   GPIE ALVG+PI D  DPVELG VARSFDSCLVCTVHAYDGKTGK+LS+FV+NG V
Sbjct:  133 RRFAPYVGTSYQQGVTLSGKPVEVYAIYGGQWPHSSFMIPGGVMCGPNLADVTRSIAILEAWKDAWLEGTWLGCSVERWMENETWDDVLAWIDESESHYNSDCGFFIRYCMDVGLDSYGQGVGNYIATGTYFQPDLYTNPTIDGRNDALIGRGGVYANGEYSDFDHLRVREDVTHSFFEGTGALHPWEGETIPVADPEAARRDGKYSWAKSPRYDVPGQGYVPLEAGPLARRMAAAGPNPGAHQDNDPLFGDIMARLGPSVMTRQLARMHEGPKYYQWVRQWLDQIDLQESFYTKPVEHESGKGFGSTEAARGSLSDWIVIEDNKIANYQVVTPTAFNIGPRDGDELRGPIEEALVGSPIKDQDDPVELGHVARSFDSCLVCTVHAYDGKTGKELSRFVINGDV 536          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: UPI000D3EB190 (nickel-dependent hydrogenase large subunit n=1 Tax=Euzebya rosea TaxID=2052804 RepID=UPI000D3EB190)

HSP 1 Score: 705 bits (1820), Expect = 7.020e-253
Identity = 315/401 (78.55%), Postives = 365/401 (91.02%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNG 1203
            RRFAPYVG +YQ GV LS KPVEVYA+FGGQWPHSSFM+PGGVMCAP LA+VTRSIAILE+WK  W+E +WLGCS++RWLEN+TW+DVLAW++E+E+ ++SDCGFFIR+C+DVGLD+YGQG GNYIATGTYFQPELY  P I++RNDALINRSGVYA GE+  FDHLRV ED  HSF++GSG+LHPW+G T P+DP + +K+GKYSWAKSPRY+V G+GY+PLEAGPLARR+AAAAPGAG HQD DPLFLDIMN +GPSVM RQLARMHEGPKY++WTR+WLDEL+L +SFYTKPVEHA G+GFG+TEAARG+L+DWIVIED KIANYQV+TPTAWNIGPRDGE TLGPIE+ALVGAPI D  DPVELG VARSFDSCLVCTVHAYDGKTGK+LS+FV+NG
Sbjct:  133 RRFAPYVGTAYQKGVTLSNKPVEVYAIFGGQWPHSSFMIPGGVMCAPNLADVTRSIAILEHWKDNWLEAEWLGCSIDRWLENKTWNDVLAWLEESEAHYNSDCGFFIRFCMDVGLDTYGQGCGNYIATGTYFQPELYTTPTIDARNDALINRSGVYAGGEFHTFDHLRVGEDVTHSFFQGSGVLHPWEGQTIPLDPVEARKQGKYSWAKSPRYNVEGKGYIPLEAGPLARRMAAAAPGAGAHQDDDPLFLDIMNTIGPSVMTRQLARMHEGPKYYKWTRQWLDELELGESFYTKPVEHAEGRGFGSTEAARGALSDWIVIEDNKIANYQVVTPTAWNIGPRDGEATLGPIEQALVGAPIVDQDDPVELGHVARSFDSCLVCTVHAYDGKTGKELSRFVING 533          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: K5BGY5_MYCHD (Nickel-dependent hydrogenase family protein n=3 Tax=Mycolicibacterium TaxID=1866885 RepID=K5BGY5_MYCHD)

HSP 1 Score: 702 bits (1813), Expect = 8.160e-252
Identity = 315/403 (78.16%), Postives = 361/403 (89.58%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVG SYQ GVVLS KPVEVYA+FGGQWPHSSFMVPGGVMCAPTLA+VTRSIAILE+WK  W+EKQWLGCS++RWLEN+TWDDVLAWVDENESQ++SDCGFFIRY LD+GLD YGQGVGNYI+TGTYF+P LYENP IE RN ALI R G++A+G+W +FD  RV+ED  HSFY+G+G LHP++G T+PIDPE+GKK+GKYSWAKSPRYDVPG+G++PLE GPLARR+AA  P A  HQD DPLF+DI N++GPSV+VRQLAR+HEGPKY++W   WL  LDL++SFY+KP+EHA GKGFG+TEAARG+L+DWIVIEDGKIANYQVITPTAWNIGPRD    LGPIE+ALVGAPI D  DPVELG VARSFDSCLVCTVHAYDGKTGK+LSKFV+NGMV
Sbjct:  133 RRFAPYVGTSYQKGVVLSNKPVEVYAIFGGQWPHSSFMVPGGVMCAPTLADVTRSIAILEHWKDEWLEKQWLGCSIDRWLENKTWDDVLAWVDENESQYNSDCGFFIRYALDIGLDKYGQGVGNYISTGTYFEPTLYENPTIEGRNAALIGRGGIFADGQWYEFDQARVTEDITHSFYRGTGALHPFEGETNPIDPEEGKKQGKYSWAKSPRYDVPGKGFIPLETGPLARRMAAGGPNAAEHQDYDPLFVDIYNKIGPSVLVRQLARVHEGPKYYKWVMDWLSRLDLKESFYSKPIEHAEGKGFGSTEAARGALSDWIVIEDGKIANYQVITPTAWNIGPRDASEQLGPIEKALVGAPIVDPEDPVELGHVARSFDSCLVCTVHAYDGKTGKELSKFVINGMV 535          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: A0A132MTI7_9ACTN (Cytochrome-c3 hydrogenase n=1 Tax=Carbonactinospora thermoautotrophica TaxID=1469144 RepID=A0A132MTI7_9ACTN)

HSP 1 Score: 700 bits (1806), Expect = 9.480e-251
Identity = 318/403 (78.91%), Postives = 357/403 (88.59%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVG SY PGVVLS KPVEVYA+FGGQWPHSSFMVPGGVM APTL++VTR+IAILE+WK  W+EKQWLGCS++RWLEN TWDDVLAWVDENESQ++SDCGFFIRY +D+GLD YG GVGNYIATGTYF+P +YENP IE RN ALI RSG+YA G+W +FD  RV ED  HSFY+G   LHP++G T PIDPE G+K+GKYSWAKSPRYDVPG GYVPLEAGPLARR+AA AP A PHQD DPLF+DI+NR+GPSV+VRQLARMHE PKY++W R WLD+LDL DSFYTKP E+A GKGFG+TEAARGSL+DWIVIEDGKIANYQVITPTAWNIGPRD +  LGPIE+A+VGAPI D  DPVELG VARSFDSCLVCTVHAYDGKTG++LSKFV+NGMV
Sbjct:  133 RRFAPYVGTSYGPGVVLSAKPVEVYAIFGGQWPHSSFMVPGGVMSAPTLSDVTRAIAILEHWKDNWLEKQWLGCSIDRWLENRTWDDVLAWVDENESQYNSDCGFFIRYAMDIGLDKYGGGVGNYIATGTYFEPSMYENPTIEGRNAALIGRSGIYAKGQWFEFDQARVREDVTHSFYEGDKPLHPFEGETKPIDPEVGRKQGKYSWAKSPRYDVPGLGYVPLEAGPLARRVAAGAPNAAPHQDNDPLFVDILNRIGPSVLVRQLARMHEAPKYYKWVRSWLDQLDLHDSFYTKPTEYAEGKGFGSTEAARGSLSDWIVIEDGKIANYQVITPTAWNIGPRDRDEALGPIEQAMVGAPIKDKEDPVELGHVARSFDSCLVCTVHAYDGKTGRELSKFVINGMV 535          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: F4CS14_PSEUX (Cytochrome-c3 hydrogenase n=4 Tax=Pseudonocardiaceae TaxID=2070 RepID=F4CS14_PSEUX)

HSP 1 Score: 699 bits (1805), Expect = 1.350e-250
Identity = 314/403 (77.92%), Postives = 359/403 (89.08%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVG SYQPGVVLS KPVEVYA+FGGQWPHSSFMVPGGVMCAPTL++VTRSI+ILE+WK  W+EKQWLGCSV+RWLEN+TW+DVLAWV+ENESQ++SDCGFFIRY L++GLD YG GVGNY+A GTYF+P LYENP I+ RN AL+ RSG+YA G+W DFD  RV ED  HSFY+G+G LHP+DG T PIDPE G+K+GKYSWAKSPRYDVPG G++PLEAGPLARR+AA APGA  HQD DPLF+DI++++GPSV+ RQLARMHEGPKY++W R WLD+LDL +SFYTKP E+A G+GFGATEAARGSLADW+VIED KI NYQVITPTAWNIGPRDG    GPIERALVG+PIAD  DPVELG VARSFDSCLVCTVHAYDGKTG++LSKFV+NGMV
Sbjct:  133 RRFAPYVGTSYQPGVVLSNKPVEVYAIFGGQWPHSSFMVPGGVMCAPTLSDVTRSISILEHWKDNWLEKQWLGCSVDRWLENKTWEDVLAWVEENESQYNSDCGFFIRYALEIGLDKYGAGVGNYLAMGTYFEPSLYENPTIDGRNAALVGRSGIYAKGQWFDFDQSRVREDVTHSFYEGTGALHPFDGETRPIDPEVGRKQGKYSWAKSPRYDVPGLGHIPLEAGPLARRMAAGAPGAASHQDADPLFVDILSKIGPSVLTRQLARMHEGPKYYKWVRSWLDQLDLHESFYTKPTEYAEGRGFGATEAARGSLADWVVIEDSKIKNYQVITPTAWNIGPRDGAAIAGPIERALVGSPIADQEDPVELGHVARSFDSCLVCTVHAYDGKTGRELSKFVINGMV 535          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: G7CJ02_MYCT3 (Hydrogenase-2, large subunit n=6 Tax=Mycobacteriaceae TaxID=1762 RepID=G7CJ02_MYCT3)

HSP 1 Score: 695 bits (1794), Expect = 6.350e-249
Identity = 316/403 (78.41%), Postives = 358/403 (88.83%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVG SYQ GVVLS KPVEVYA+FGGQWPHSSFMVPGGVM APTLA+VTRSIAILE+WK  W+EKQWLGCSVERWLEN+TWDDVLAWVDENE+Q++SDCGFFIRYCLD+GLD YGQGVGNY+ATGTYF+P  YENP IE RNDALI RSG++A+G+W +FD  RV+ED  HSF++G   LHP++G T PIDPE G+ +GKYSWAKSPRYD+P  G +PLEAGPLARR+AA  P A  HQD DPLF+DI N++GPSVMVRQLARMHE PKY+QWTR WLD+LDL++SFYTKPVEHA G+GFGATEAARG+LADWIVIED KIANYQVITPTAWNIGPRD   TLGPIE+ALVGAP+ D  DPVELG VARSFDSCLVCTVHAYDG++G++LSKFV+NGMV
Sbjct:  133 RRFAPYVGTSYQTGVVLSAKPVEVYAIFGGQWPHSSFMVPGGVMSAPTLADVTRSIAILEHWKDNWLEKQWLGCSVERWLENKTWDDVLAWVDENEAQYNSDCGFFIRYCLDIGLDKYGQGVGNYLATGTYFEPSRYENPTIEGRNDALIGRSGIFADGKWYEFDQSRVTEDVTHSFFQGDRPLHPFEGETIPIDPEVGRAQGKYSWAKSPRYDIPEVGRIPLEAGPLARRMAAGGPNALEHQDNDPLFVDIYNKIGPSVMVRQLARMHEAPKYYQWTRAWLDQLDLKESFYTKPVEHAEGRGFGATEAARGALADWIVIEDSKIANYQVITPTAWNIGPRDASETLGPIEKALVGAPVVDAEDPVELGHVARSFDSCLVCTVHAYDGRSGRELSKFVINGMV 535          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: A0A178LHJ1_9MYCO (Cytochrome-c3 hydrogenase n=3 Tax=Mycolicibacterium iranicum TaxID=912594 RepID=A0A178LHJ1_9MYCO)

HSP 1 Score: 693 bits (1789), Expect = 3.660e-248
Identity = 317/403 (78.66%), Postives = 354/403 (87.84%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVG SYQPGVVLS KPVEVYA+FGGQWPHSSFMVPGGVM APTL++VTR+ AILE+WK  W+EKQWLGCSVERWLEN+TWDDVL W+DENESQ++SDCGFFIRYCLDVGLD YGQGVGNY+ATGTYF P LYENP I+ RN ALI RSGVYA G+W +FD   V EDT HSFY+GS  LHP++G T PIDPE G+K+GKYSWAKSPRY V   G++PLEAGPLARR+AAA P A PHQD DPLF DIM+++GPSV+VRQLARMHE PKY+ W R WLD+LDL++SFYTKP EHA G+GFGATEAARG+LADWIVIED KI NYQV+TPTAWNIGPRDGE  LGPIERALVG+PI D  DPVELG VARSFDSCLVCTVHAYDGK+GKQLS+FV+NGMV
Sbjct:  133 RRFAPYVGTSYQPGVVLSSKPVEVYAIFGGQWPHSSFMVPGGVMSAPTLSDVTRATAILEHWKDNWLEKQWLGCSVERWLENKTWDDVLEWIDENESQYNSDCGFFIRYCLDVGLDKYGQGVGNYLATGTYFDPALYENPTIDGRNAALIGRSGVYAKGQWYEFDQANVWEDTTHSFYEGSRPLHPFEGETIPIDPEAGRKQGKYSWAKSPRYAVGELGHIPLEAGPLARRMAAAGPNAAPHQDNDPLFADIMDKIGPSVLVRQLARMHEAPKYYHWARTWLDQLDLKESFYTKPTEHAEGRGFGATEAARGALADWIVIEDNKIKNYQVVTPTAWNIGPRDGEDVLGPIERALVGSPIVDPEDPVELGHVARSFDSCLVCTVHAYDGKSGKQLSQFVINGMV 535          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: A0A3S4RF36_MYCCI (Hydrogen:quinone oxidoreductase n=1 Tax=Mycolicibacterium chitae TaxID=1792 RepID=A0A3S4RF36_MYCCI)

HSP 1 Score: 691 bits (1782), Expect = 4.250e-247
Identity = 314/403 (77.92%), Postives = 354/403 (87.84%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRFAPYVG SYQ GVVLS KPVEVYA++GGQWPHSSFMVPGGVMCAPTL++VTRSIAILE+W + W+E QWLGC+++RWLEN+TW+DVLAWVDENE+Q++SDCGFFIRYCLDVGLD YG GVGNYIATGTYF+P  YENP IE RNDALI RSGVY NG+W +FD  +V+ED  HSFY G   LHP++G T PIDPEQG+K+GKYSWAKSPRY V   G +PLEAGPLARR+AA AP A  HQD DPLF+D+ N++GPSVMVRQLARMHE PKY++WTR WLD+LDL++SFYTKPVEHA G GFGATEAARG+L DWIVIED KI NYQVITPTAWNIGPRDG+  LGPIERALVG+PI D  DPVELG VARSFDSCLVCTVHAYDGKTGK+LSKFV+NGMV
Sbjct:  133 RRFAPYVGTSYQKGVVLSAKPVEVYAIYGGQWPHSSFMVPGGVMCAPTLSDVTRSIAILEHWNNNWLEGQWLGCTIDRWLENKTWEDVLAWVDENEAQYNSDCGFFIRYCLDVGLDKYGAGVGNYIATGTYFEPSRYENPTIEGRNDALIGRSGVYVNGDWHEFDQAKVTEDVTHSFYAGDRPLHPFEGETIPIDPEQGRKDGKYSWAKSPRYAVGEHGNIPLEAGPLARRMAAGAPNAAAHQDYDPLFVDMYNKIGPSVMVRQLARMHEAPKYYKWTREWLDQLDLRESFYTKPVEHAEGMGFGATEAARGALCDWIVIEDSKIKNYQVITPTAWNIGPRDGDQVLGPIERALVGSPIVDPEDPVELGHVARSFDSCLVCTVHAYDGKTGKELSKFVINGMV 535          
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Match: H6N430_GORPV (Putative [NiFe] hydrogenase large subunit n=4 Tax=Gordonia TaxID=2053 RepID=H6N430_GORPV)

HSP 1 Score: 691 bits (1782), Expect = 5.670e-247
Identity = 313/404 (77.48%), Postives = 360/404 (89.11%), Query Frame = 1
Query:    1 RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLAEVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHDSDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALINRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGKKEGKYSWAKSPRYDVPGQGY-VPLEAGPLARRLAAAAPGAGPHQDQDPLFLDIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHASGKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPIERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVNGMV 1209
            RRF+ Y G SYQPGVVLSGKPVEVYA+FGGQWPHSSFMVPGGVMCAPTLA+VTRSIAILE+WK  W+EK WLGCSV+RWLEN TW DVLAWVDENESQHDSDCGFFIRYCLD+GL SYG GVGNYIATGTYF+P LY++P +E RNDALINRSG+YA+G + DFDHL+V+ED  HSFY G   LHPW+G TDPIDPE+GK +GKYS+AKSPRYD+ G G  +PLEAGPLARR+AA+APG GPHQD DPLF D+++++GPSV VRQLARMHE PKYF+W R+WLD+LDLQ+SFY KPVE  SGKGFG+TEAARGSL+DWIV++ GKIANYQV+TPTAWNIGPRD +G LGPIE+AL+G PI D++DPVELG VARSFDSCLVCTVHAYD K+GK++SKFVVN M+
Sbjct:  140 RRFSIYTGTSYQPGVVLSGKPVEVYAIFGGQWPHSSFMVPGGVMCAPTLADVTRSIAILEHWKDNWLEKYWLGCSVDRWLENRTWADVLAWVDENESQHDSDCGFFIRYCLDIGLHSYGAGVGNYIATGTYFEPSLYDHPTVEGRNDALINRSGIYADGHYYDFDHLKVAEDVTHSFYNGDRALHPWEGETDPIDPERGKAKGKYSFAKSPRYDLNGSGTGIPLEAGPLARRIAASAPGGGPHQDFDPLFKDMIDKIGPSVFVRQLARMHEAPKYFRWARQWLDDLDLQESFYQKPVEPESGKGFGSTEAARGSLSDWIVLDKGKIANYQVVTPTAWNIGPRDKDGVLGPIEQALIGTPIHDINDPVELGHVARSFDSCLVCTVHAYDAKSGKEMSKFVVNSML 543          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65611.15947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0RLW7_9ACTN8.140e-26684.12Cytochrome-c3 hydrogenase n=1 Tax=Acidimicrobiacea... [more]
A0A5Q4FV68_9ACTN3.610e-25379.95Cytochrome-c3 hydrogenase n=1 Tax=Nitriliruptor sp... [more]
UPI000D3EB1907.020e-25378.55nickel-dependent hydrogenase large subunit n=1 Tax... [more]
K5BGY5_MYCHD8.160e-25278.16Nickel-dependent hydrogenase family protein n=3 Ta... [more]
A0A132MTI7_9ACTN9.480e-25178.91Cytochrome-c3 hydrogenase n=1 Tax=Carbonactinospor... [more]
F4CS14_PSEUX1.350e-25077.92Cytochrome-c3 hydrogenase n=4 Tax=Pseudonocardiace... [more]
G7CJ02_MYCT36.350e-24978.41Hydrogenase-2, large subunit n=6 Tax=Mycobacteriac... [more]
A0A178LHJ1_9MYCO3.660e-24878.66Cytochrome-c3 hydrogenase n=3 Tax=Mycolicibacteriu... [more]
A0A3S4RF36_MYCCI4.250e-24777.92Hydrogen:quinone oxidoreductase n=1 Tax=Mycoliciba... [more]
H6N430_GORPV5.670e-24777.48Putative [NiFe] hydrogenase large subunit n=4 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65611contigM-pyrifera_M_contig65611:3..1214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score714.5
Seed ortholog evalue2.7e-203
Seed eggNOG ortholog1380386.JIAW01000025_gene6795
Preferred namehupL
KEGG rclassRC00250
KEGG koko:K06281
KEGG ReactionR08034
KEGG Pathwayko00633,ko01120,map00633,map01120
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ni,Fe-hydrogenase I large subunit
EggNOG OGs236A3@1762,2GKQY@201174,COG0374@1,COG0374@2
EC1.12.99.6
COG Functional cat.C
Best tax levelMycobacteriaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size1212
Cds size1212
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816544.4485543-CDS-M-pyrifera_M_contig65611:2..12141622816544.4485543-CDS-M-pyrifera_M_contig65611:2..1214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65611 3..1214 +
1692278037.9434655-CDS-M-pyrifera_M_contig65611:2..12141692278037.9434655-CDS-M-pyrifera_M_contig65611:2..1214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65611 3..1214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65611.15947.1prot_M-pyrifera_M_contig65611.15947.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig65611 3..1214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig65611.15947.1

>prot_M-pyrifera_M_contig65611.15947.1 ID=prot_M-pyrifera_M_contig65611.15947.1|Name=mRNA_M-pyrifera_M_contig65611.15947.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=404bp
RRFAPYVGESYQPGVVLSGKPVEVYAMFGGQWPHSSFMVPGGVMCAPTLA
EVTRSIAILENWKHAWMEKQWLGCSVERWLENETWDDVLAWVDENESQHD
SDCGFFIRYCLDVGLDSYGQGVGNYIATGTYFQPELYENPDIESRNDALI
NRSGVYANGEWSDFDHLRVSEDTAHSFYKGSGLLHPWDGVTDPIDPEQGK
KEGKYSWAKSPRYDVPGQGYVPLEAGPLARRLAAAAPGAGPHQDQDPLFL
DIMNRLGPSVMVRQLARMHEGPKYFQWTRRWLDELDLQDSFYTKPVEHAS
GKGFGATEAARGSLADWIVIEDGKIANYQVITPTAWNIGPRDGEGTLGPI
ERALVGAPIADVHDPVELGLVARSFDSCLVCTVHAYDGKTGKQLSKFVVN
GMV*
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mRNA from alignment at M-pyrifera_M_contig65611:3..1214+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig65611.15947.1 ID=mRNA_M-pyrifera_M_contig65611.15947.1|Name=mRNA_M-pyrifera_M_contig65611.15947.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig65611:3..1214+ (Macrocystis pyrifera P11B4 male)
CGTCGCTTTGCCCCGTATGTGGGCGAGAGCTACCAGCCCGGGGTCGTCCT GTCCGGCAAGCCGGTCGAGGTCTACGCGATGTTCGGCGGTCAGTGGCCGC ACTCGAGCTTCATGGTGCCCGGCGGTGTCATGTGTGCTCCGACGCTGGCC GAGGTGACGCGATCGATCGCGATCCTCGAAAACTGGAAGCACGCCTGGAT GGAGAAGCAGTGGCTCGGCTGCAGCGTCGAGCGCTGGCTCGAGAACGAGA CCTGGGACGACGTGCTCGCCTGGGTCGACGAGAACGAGAGCCAACACGAC TCCGACTGTGGGTTCTTCATCCGGTACTGCCTCGATGTCGGTCTCGACTC CTATGGGCAGGGCGTCGGCAACTACATCGCCACCGGCACCTACTTCCAGC CCGAGCTGTACGAGAACCCCGACATCGAGAGCCGCAACGACGCACTGATC AATCGGTCGGGTGTCTACGCCAATGGCGAGTGGTCCGATTTCGATCATCT GCGAGTCAGCGAAGACACCGCCCATTCCTTCTACAAGGGGAGTGGCCTGC TGCATCCATGGGACGGCGTCACCGACCCCATCGATCCGGAGCAGGGAAAG AAGGAGGGCAAGTACAGCTGGGCCAAGTCGCCACGCTACGACGTTCCCGG GCAGGGCTACGTGCCGCTCGAGGCCGGTCCGCTCGCTCGTCGTCTCGCCG CCGCCGCCCCCGGCGCCGGTCCGCACCAAGACCAAGATCCGCTGTTCCTC GACATCATGAACCGACTCGGCCCATCGGTGATGGTCCGACAGTTGGCCCG TATGCACGAAGGGCCCAAGTATTTCCAGTGGACCCGTCGATGGCTCGACG AGCTCGATCTGCAGGACAGCTTCTACACCAAACCGGTCGAGCACGCCTCG GGCAAGGGGTTCGGGGCAACCGAGGCGGCACGTGGGTCACTGGCCGACTG GATCGTCATCGAGGATGGCAAGATCGCCAACTATCAGGTGATCACTCCCA CGGCCTGGAACATCGGTCCTCGAGATGGCGAAGGCACGCTCGGACCGATC GAGCGTGCGCTCGTCGGTGCACCGATCGCCGACGTTCACGACCCGGTAGA ACTCGGACTGGTGGCACGAAGCTTCGACTCATGTCTGGTCTGCACCGTGC ACGCCTACGACGGCAAGACGGGGAAGCAGCTCTCGAAGTTCGTCGTCAAC GGGATGGTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig65611:3..1214+

>mRNA_M-pyrifera_M_contig65611.15947.1 ID=mRNA_M-pyrifera_M_contig65611.15947.1|Name=mRNA_M-pyrifera_M_contig65611.15947.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2424bp|location=Sequence derived from alignment at M-pyrifera_M_contig65611:3..1214+ (Macrocystis pyrifera P11B4 male)
CGTCGCTTTGCCCCGTATGTGGGCGAGAGCTACCAGCCCGGGGTCGTCCT
GTCCGGCAAGCCGGTCGAGGTCTACGCGATGTTCGGCGGTCAGTGGCCGC
ACTCGAGCTTCATGGTGCCCGGCGGTGTCATGTGTGCTCCGACGCTGGCC
GAGGTGACGCGATCGATCGCGATCCTCGAAAACTGGAAGCACGCCTGGAT
GGAGAAGCAGTGGCTCGGCTGCAGCGTCGAGCGCTGGCTCGAGAACGAGA
CCTGGGACGACGTGCTCGCCTGGGTCGACGAGAACGAGAGCCAACACGAC
TCCGACTGTGGGTTCTTCATCCGGTACTGCCTCGATGTCGGTCTCGACTC
CTATGGGCAGGGCGTCGGCAACTACATCGCCACCGGCACCTACTTCCAGC
CCGAGCTGTACGAGAACCCCGACATCGAGAGCCGCAACGACGCACTGATC
AATCGGTCGGGTGTCTACGCCAATGGCGAGTGGTCCGATTTCGATCATCT
GCGAGTCAGCGAAGACACCGCCCATTCCTTCTACAAGGGGAGTGGCCTGC
TGCATCCATGGGACGGCGTCACCGACCCCATCGATCCGGAGCAGGGAAAG
AAGGAGGGCAAGTACAGCTGGGCCAAGTCGCCACGCTACGACGTTCCCGG
GCAGGGCTACGTGCCGCTCGAGGCCGGTCCGCTCGCTCGTCGTCTCGCCG
CCGCCGCCCCCGGCGCCGGTCCGCACCAAGACCAAGATCCGCTGTTCCTC
GACATCATGAACCGACTCGGCCCATCGGTGATGGTCCGACAGTTGGCCCG
TATGCACGAAGGGCCCAAGTATTTCCAGTGGACCCGTCGATGGCTCGACG
AGCTCGATCTGCAGGACAGCTTCTACACCAAACCGGTCGAGCACGCCTCG
GGCAAGGGGTTCGGGGCAACCGAGGCGGCACGTGGGTCACTGGCCGACTG
GATCGTCATCGAGGATGGCAAGATCGCCAACTATCAGGTGATCACTCCCA
CGGCCTGGAACATCGGTCCTCGAGATGGCGAAGGCACGCTCGGACCGATC
GAGCGTGCGCTCGTCGGTGCACCGATCGCCGACGTTCACGACCCGGTAGA
ACTCGGACTGGTGGCACGAAGCTTCGACTCATGTCTGGTCTGCACCGTGC
ACGCCTACGACGGCAAGACGGGGAAGCAGCTCTCGAAGTTCGTCGTCAAC
GGGATGGTCTGACGTCGCTTTGCCCCGTATGTGGGCGAGAGCTACCAGCC
CGGGGTCGTCCTGTCCGGCAAGCCGGTCGAGGTCTACGCGATGTTCGGCG
GTCAGTGGCCGCACTCGAGCTTCATGGTGCCCGGCGGTGTCATGTGTGCT
CCGACGCTGGCCGAGGTGACGCGATCGATCGCGATCCTCGAAAACTGGAA
GCACGCCTGGATGGAGAAGCAGTGGCTCGGCTGCAGCGTCGAGCGCTGGC
TCGAGAACGAGACCTGGGACGACGTGCTCGCCTGGGTCGACGAGAACGAG
AGCCAACACGACTCCGACTGTGGGTTCTTCATCCGGTACTGCCTCGATGT
CGGTCTCGACTCCTATGGGCAGGGCGTCGGCAACTACATCGCCACCGGCA
CCTACTTCCAGCCCGAGCTGTACGAGAACCCCGACATCGAGAGCCGCAAC
GACGCACTGATCAATCGGTCGGGTGTCTACGCCAATGGCGAGTGGTCCGA
TTTCGATCATCTGCGAGTCAGCGAAGACACCGCCCATTCCTTCTACAAGG
GGAGTGGCCTGCTGCATCCATGGGACGGCGTCACCGACCCCATCGATCCG
GAGCAGGGAAAGAAGGAGGGCAAGTACAGCTGGGCCAAGTCGCCACGCTA
CGACGTTCCCGGGCAGGGCTACGTGCCGCTCGAGGCCGGTCCGCTCGCTC
GTCGTCTCGCCGCCGCCGCCCCCGGCGCCGGTCCGCACCAAGACCAAGAT
CCGCTGTTCCTCGACATCATGAACCGACTCGGCCCATCGGTGATGGTCCG
ACAGTTGGCCCGTATGCACGAAGGGCCCAAGTATTTCCAGTGGACCCGTC
GATGGCTCGACGAGCTCGATCTGCAGGACAGCTTCTACACCAAACCGGTC
GAGCACGCCTCGGGCAAGGGGTTCGGGGCAACCGAGGCGGCACGTGGGTC
ACTGGCCGACTGGATCGTCATCGAGGATGGCAAGATCGCCAACTATCAGG
TGATCACTCCCACGGCCTGGAACATCGGTCCTCGAGATGGCGAAGGCACG
CTCGGACCGATCGAGCGTGCGCTCGTCGGTGCACCGATCGCCGACGTTCA
CGACCCGGTAGAACTCGGACTGGTGGCACGAAGCTTCGACTCATGTCTGG
TCTGCACCGTGCACGCCTACGACGGCAAGACGGGGAAGCAGCTCTCGAAG
TTCGTCGTCAACGGGATGGTCTGA
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