prot_M-pyrifera_M_contig65583.15941.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65583.15941.1
Unique Nameprot_M-pyrifera_M_contig65583.15941.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length159
Homology
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: A0A485LLC5_9STRA (AP complex subunit sigma n=13 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LLC5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.790e-72
Identity = 104/156 (66.67%), Postives = 136/156 (87.18%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLES-ATRRA 155
            MI+G+ I+NNHGKAR+ KFY+ +  AE+Q  IR+IY  +SKR D +CNF+EG ++  WG  +KL+YRHYATL+FVFAVD+ ES+LGILDL+QVFVE LDKCFENVCELDLIFHSD+VH++LDEIVMGGMVLET++++ILTA+ EMNKL++ +T+R+
Sbjct:    1 MIKGVLIVNNHGKARIVKFYEHVPDAEQQAVIRDIYTQVSKRPDTLCNFLEG-SVRYWGDGIKLIYRHYATLYFVFAVDKQESDLGILDLIQVFVETLDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNINEILTAVNEMNKLDANSTKRS 155          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: A0A024GA69_9STRA (AP complex subunit sigma n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GA69_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.060e-71
Identity = 103/154 (66.88%), Postives = 131/154 (85.06%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLESATRR 154
            MI+GI I+NNHGK R+ KFY+ +   E+Q  IR+I+  +SKR D +CNF+EG  +  WG  VKL+YRHYATL+FVFAVDQ ES+LGILDL+QVFVE LDKCFENVCELDLIFHSD+VH++LDEIVMGGMVLET++++ILTA+ EMN+L+SA+ +
Sbjct:   21 MIKGILIVNNHGKPRIVKFYEHVPDTEQQAVIRDIFTQVSKRPDSLCNFLEG-TVWYWGNGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVETLDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNINEILTAVNEMNRLDSASMK 173          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: A0A5A8CV74_CAFRO (AP complex subunit sigma n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CV74_CAFRO)

HSP 1 Score: 220 bits (561), Expect = 2.940e-71
Identity = 107/158 (67.72%), Postives = 131/158 (82.91%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLESATRRAATK 158
            MI+GIF+INNHGK RL K +  MT  E+Q+T+REI+G+LSKR+D VCNF+EGG++T++ KD KL+YRH+ATL+FV A D NES+LG+LDLVQVFVE LDK FENVCELDLIF SD VH ILDE+VMGGMVLETS  +I+ A+T M +LE  TR AA K
Sbjct:    1 MIKGIFVINNHGKPRLIKDFQRMTQPEQQQTVREIFGLLSKRSDNVCNFLEGGSVTTFSKDTKLIYRHFATLYFVVAADGNESDLGLLDLVQVFVETLDKKFENVCELDLIFRSDMVHHILDEVVMGGMVLETSGKEIMDAVTAMERLELETRSAAIK 158          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: D2VB79_NAEGR (AP complex subunit sigma n=3 Tax=Naegleria TaxID=5761 RepID=D2VB79_NAEGR)

HSP 1 Score: 220 bits (561), Expect = 3.360e-71
Identity = 100/153 (65.36%), Postives = 131/153 (85.62%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLESATR 153
            MI+GI ++NNHGKARL+KF++ +   ++Q+ +RE Y ++ +R D VCNF+EGGA+  WGKD KL+YRHYATL+F+FAVDQNESELGILDL+QVFVE LDKCFENVCELDLIFHSD+VH+IL+EIV+GG+VLET+  +IL +I E N +E+ T+
Sbjct:    1 MIKGILVVNNHGKARLSKFFEQVPFEKQQQAVRECYSLVVRRPDNVCNFLEGGAI--WGKDTKLIYRHYATLYFIFAVDQNESELGILDLIQVFVETLDKCFENVCELDLIFHSDKVHYILEEIVIGGLVLETNKEEILMSIKEQNDIENRTK 151          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: F0WXY6_9STRA (AP2 complex subunit sigma putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WXY6_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.510e-70
Identity = 102/154 (66.23%), Postives = 131/154 (85.06%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLESATRR 154
            MI+GI I+NNHGK R+ KFY+ +   E+Q  IR+I+  +SKR D +CNF+EG ++  WG  VKL+YRHYATL+FVFAVDQ ES+LGILDL+QVFVE LDKCFENVCELDLIFHSD+VH++LDEIVMGGMVLET++++IL A+ EMN+L+SA+ +
Sbjct:   38 MIKGILIVNNHGKPRIVKFYEHVPDTEQQAVIRDIFTQVSKRPDSLCNFLEG-SVWYWGDGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVETLDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNINEILIAVNEMNRLDSASMK 190          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: H3G8F4_PHYRM (AP complex subunit sigma n=22 Tax=Oomycota TaxID=4762 RepID=H3G8F4_PHYRM)

HSP 1 Score: 218 bits (555), Expect = 2.660e-70
Identity = 103/159 (64.78%), Postives = 132/159 (83.02%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLESATRRAATKS 159
            MI+GI I+NNHGK R+ KFY+ +  AE+Q  IR+IY  +SKR D +CNF+EG  +  WG  VKL+YRHYATL+FVFAVD+ ES+LGILDL+QVFVE LDK FENVCELDLIFHSD+VH+ LDEIVMGGMVLET+++++LTA+ EMN+L+S + R + +S
Sbjct:    1 MIKGILIVNNHGKPRIVKFYEHVPDAEQQAVIRDIYTQVSKRPDTLCNFLEG-TVRYWGNGVKLIYRHYATLYFVFAVDKQESDLGILDLIQVFVETLDKIFENVCELDLIFHSDKVHYALDEIVMGGMVLETNINEVLTAVNEMNRLDSVSSRRSLQS 158          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: A0A2R5GNW7_9STRA (AP complex subunit sigma n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNW7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 6.840e-70
Identity = 104/150 (69.33%), Postives = 128/150 (85.33%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALT-SWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLE 149
            MIRGIFI+NN+G+ R  KFY+++  A +Q  IREI+ ++SKR+D VCNF+ G +L+ SWGK  KL+YRHYATLFFVFA +  ESELGILDL+QVFVE LDKCFE+VCELDLIFH+D+VH+ILDEIVMGG+VLET++HDIL AI E NKLE
Sbjct:    1 MIRGIFIVNNYGQPRCVKFYEAVDEATQQILIREIFLLVSKRSDNVCNFMAGDSLSGSWGKGTKLIYRHYATLFFVFACEDTESELGILDLIQVFVETLDKCFESVCELDLIFHADKVHYILDEIVMGGLVLETNMHDILVAINETNKLE 150          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: A0A0D2X2M7_CAPO3 (AP complex subunit sigma n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X2M7_CAPO3)

HSP 1 Score: 207 bits (527), Expect = 5.370e-66
Identity = 101/149 (67.79%), Postives = 121/149 (81.21%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLE 149
            MIRGI + NNHGK RL+KFY   +   +Q+ IRE + ++SKR+D VCNF+EGG L   G D KL+YRHYATL+FVF VD +ESELGILDL+QVFVE LDKCFENVCELDLIFH D+VH+ILDEIVMGGMVLET++ +IL AI   +KLE
Sbjct:    1 MIRGILVFNNHGKPRLSKFYQHYSEEMQQQIIRETFFLVSKRSDNVCNFLEGGTLIG-GSDSKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHYILDEIVMGGMVLETNMTEILGAIDSQSKLE 148          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: A0A7S2P852_9STRA (AP complex subunit sigma n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P852_9STRA)

HSP 1 Score: 207 bits (528), Expect = 5.590e-66
Identity = 99/156 (63.46%), Postives = 126/156 (80.77%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAE-KQRTIREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLESATRRA 155
            MI+G+ I+NN GK RLAKFY S+T+ E +QR IR ++  +S R D  CN++EG  +  WG ++KL+YRHYATL+FVFAVD  ES+LGILDL+QVFVE LDKCFENVCELDLIFHSD+VH++LDEIVMGGMVLET++  IL AI +  KL +A+ +A
Sbjct:    1 MIKGVIIVNNQGKPRLAKFYQSVTSEEIQQRVIRRVFEQISSRPDNFCNYLEG-IVPEWGSNIKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNIASILQAIQDQGKLHAASLKA 155          
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Match: A0A6S8ZKR8_9STRA (AP complex subunit sigma n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZKR8_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.130e-65
Identity = 97/159 (61.01%), Postives = 128/159 (80.50%), Query Frame = 0
Query:    1 MIRGIFIINNHGKARLAKFYDSMTTAEKQRT-IREIYGMLSKRTDGVCNFVEGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDKCFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLESATRRAATK 158
            MI+GI I+NNHGK RL KFY S+T+ E Q++ IR ++  +++R D  CN++EG  +  WG ++KL+YRHYATL+FVFAVD  ES+LGILDL+QVFVE LDKCFENVCELDLIFHSDRVH++LDEIVMGGMVLET+++ +L AI +  K+  ++   A+K
Sbjct:    1 MIKGILIVNNHGKPRLVKFYQSVTSEETQQSVIRRVFQQVAQRPDSFCNYLEG-IIPEWGSNIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIVMGGMVLETNINSVLQAIGDQTKMHKSSLSQASK 158          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65583.15941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485LLC5_9STRA2.790e-7266.67AP complex subunit sigma n=13 Tax=Saprolegniaceae ... [more]
A0A024GA69_9STRA1.060e-7166.88AP complex subunit sigma n=1 Tax=Albugo candida Ta... [more]
A0A5A8CV74_CAFRO2.940e-7167.72AP complex subunit sigma n=1 Tax=Cafeteria roenber... [more]
D2VB79_NAEGR3.360e-7165.36AP complex subunit sigma n=3 Tax=Naegleria TaxID=5... [more]
F0WXY6_9STRA1.510e-7066.23AP2 complex subunit sigma putative n=1 Tax=Albugo ... [more]
H3G8F4_PHYRM2.660e-7064.78AP complex subunit sigma n=22 Tax=Oomycota TaxID=4... [more]
A0A2R5GNW7_9STRA6.840e-7069.33AP complex subunit sigma n=1 Tax=Hondaea fermental... [more]
A0A0D2X2M7_CAPO35.370e-6667.79AP complex subunit sigma n=1 Tax=Capsaspora owczar... [more]
A0A7S2P852_9STRA5.590e-6663.46AP complex subunit sigma n=1 Tax=Leptocylindrus da... [more]
A0A6S8ZKR8_9STRA1.130e-6561.01AP complex subunit sigma n=1 Tax=Ditylum brightwel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..148
e-value: 1.9E-48
score: 164.0
NoneNo IPR availableGENE3D3.30.450.60coord: 1..159
e-value: 1.2E-61
score: 209.0
NoneNo IPR availablePANTHERPTHR11753:SF10AP-3 COMPLEX SUBUNIT SIGMA-2coord: 1..151
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..159
e-value: 2.0E-55
score: 184.8
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753CLATHRIN COAT ASSEMBLY PROTEINcoord: 1..151
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65583contigM-pyrifera_M_contig65583:525..1323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65583.15941.1mRNA_M-pyrifera_M_contig65583.15941.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65583 525..1323 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65583.15941.1 ID=prot_M-pyrifera_M_contig65583.15941.1|Name=mRNA_M-pyrifera_M_contig65583.15941.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp
MIRGIFIINNHGKARLAKFYDSMTTAEKQRTIREIYGMLSKRTDGVCNFV
EGGALTSWGKDVKLVYRHYATLFFVFAVDQNESELGILDLVQVFVEVLDK
CFENVCELDLIFHSDRVHFILDEIVMGGMVLETSLHDILTAITEMNKLES
ATRRAATKS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022775AP_mu_sigma_su
IPR016635AP_complex_ssu
IPR011012Longin-like_dom_sf