mRNA_M-pyrifera_M_contig100670.153.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100670.153.1
Unique NamemRNA_M-pyrifera_M_contig100670.153.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A812TPL2_9DINO (ABCE2 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812TPL2_9DINO)

HSP 1 Score: 271 bits (692), Expect = 3.920e-85
Identity = 131/189 (69.31%), Postives = 158/189 (83.60%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP EVLGLVGTNGIGKSTALKVL+ + KPNLG F  PP WEEIL+HFRGSELQGYF  LL++K+KAV+K QYVDSIP   KGTV +LV ++D RGV++ +L  LQL+H+ DR +++LSGGELQRFA+C+ AVQDA VYMFDEPSSYLD+KQRLIA +VIR+++  A+     +YVICVEHDLAVLDYL
Sbjct:   65 PRPGEVLGLVGTNGIGKSTALKVLADKLKPNLGEFAAPPTWEEILKHFRGSELQGYFTKLLDKKLKAVIKIQYVDSIPRAIKGTVGKLVKRLDGRGVREEMLTKLQLDHVADREVELLSGGELQRFAICVVAVQDAQVYMFDEPSSYLDIKQRLIAGRVIRDVL--ADDTSGSKYVICVEHDLAVLDYL 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A812SV30_9DINO (ABCE2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812SV30_9DINO)

HSP 1 Score: 265 bits (678), Expect = 3.000e-82
Identity = 131/191 (68.59%), Postives = 156/191 (81.68%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELV--EGAEKRDAPRYVICVEHDLAVLDYL 567
            PR  +VLGLVGTNGIGKSTAL++LS + KPNLG+FEDPP WE IL++FRGSELQGYF H+LE K+KAV+KPQYVDSIP   +G VE ++   D RGV+D ++ DLQL+H+  R I  LSGGELQRFA+ + AVQDADVYMFDEPSSYLDVKQR+ AA VIR L+  EGA+++    YVICVEHDLAVLDYL
Sbjct:  103 PRGGQVLGLVGTNGIGKSTALRILSAKMKPNLGQFEDPPTWEAILKNFRGSELQGYFTHILEEKIKAVIKPQYVDSIPRAVQGQVEAIIAGKDKRGVRDTMMVDLQLDHVKTREIAFLSGGELQRFAIAVVAVQDADVYMFDEPSSYLDVKQRMRAANVIRSLLDGEGADRK----YVICVEHDLAVLDYL 289
[Close]
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A7J7QES3_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QES3_9CHLO)

HSP 1 Score: 248 bits (633), Expect = 8.190e-79
Identity = 123/189 (65.08%), Postives = 148/189 (78.31%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALK+L+G+ KPNLGRFE+PP WEEIL +FRGSELQ YF  +LE  +KAV+KPQYVD IP   +G V+ +++  D RG+K  LL  L L  +LDRN++ LSGGELQRFA+ + A Q ADVYM DEPSSYLDV+QRL AA+VIREL+    +    RYVI VEHDL+VLDYL
Sbjct:    4 PRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFENPPDWEEILGYFRGSELQNYFTRVLEDDIKAVIKPQYVDHIPKAVRGNVDEVLSGKDQRGIKPYLLDKLDLTQVLDRNVEHLSGGELQRFAIAVVAAQKADVYMIDEPSSYLDVRQRLHAAKVIRELLGTEGEGYQQRYVIVVEHDLSVLDYL 192
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BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: I0Z105_COCSC (Abce1 protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z105_COCSC)

HSP 1 Score: 251 bits (642), Expect = 6.050e-78
Identity = 127/189 (67.20%), Postives = 150/189 (79.37%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALKVL+G+ KPNLGRFE PP W+EIL HFRGSELQ YF  +LE  + A +KPQYVD IP   +G+VE ++ + D+RGVK+ LL DL LE +LDR ++ LSGGELQRFA+ + A Q+ADVYM DEPSSYLDV+QRL AAQVIR L+ G +K     YVI VEHDLAVLDYL
Sbjct:   51 PRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFESPPDWQEILGHFRGSELQNYFTRILEDDLHATIKPQYVDHIPKAVRGSVESIIDEKDARGVKEMLLRDLDLEQVLDREVEHLSGGELQRFAIAVVAAQEADVYMIDEPSSYLDVRQRLKAAQVIRSLL-GPKK-----YVIVVEHDLAVLDYL 233
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BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A0Q3EC44_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3EC44_BRADI)

HSP 1 Score: 245 bits (626), Expect = 3.040e-77
Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALKVL+G+ KPNLGRF++PP W+EIL +FRGSELQ YF  +LE  +KA++KPQYVD IP   +G V +++ + D RG+K  L  DL+L  ++DRN+  LSGGELQRFA+ + AVQ A++YMFDEPSSYLDVKQRL AAQVIR L+       A  YVI VEHDL+VLDYL
Sbjct:  100 PRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERGIKAELCVDLELNQVIDRNVGDLSGGELQRFAIAVVAVQSAEIYMFDEPSSYLDVKQRLKAAQVIRSLLR------ANSYVIVVEHDLSVLDYL 282
[Close]
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A2P6PZH4_ROSCH (Putative molybdate-transporting ATPase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PZH4_ROSCH)

HSP 1 Score: 243 bits (620), Expect = 3.380e-77
Identity = 119/189 (62.96%), Postives = 145/189 (76.72%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALKVL+G+ KPNLGRF +PP W+EIL +FRGSELQ YF  +LE  +KA++KPQYVD IP    G V  ++ + D RGVK+ L  DL+L  ++DRN+  LSGGELQRFA+ + A+Q A++YMFDEPSSYLDVKQRL AAQV+R L+          YVI VEHDL+VLDYL
Sbjct:  100 PRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVHGNVGEVLNQKDERGVKEELCHDLELNQVIDRNVGDLSGGELQRFAIAVVAIQSAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNS------YVIVVEHDLSVLDYL 282
[Close]
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A6H5KJR1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJR1_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 3.880e-77
Identity = 124/189 (65.61%), Postives = 148/189 (78.31%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALK+L+G+ KPNLGRFE PP W+EIL+HFRGSELQ YF  +LE  +KA++KPQYVD IP   KG V  + T  +  G  DR+L ++ L H+LDR++ VLSGGELQRFA+ + AVQ ADVYMFDEPSSYLDVKQRL AA  IR ++ G +   A RYV+ VEHDLAVLDYL
Sbjct:  167 PRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFESPPDWQEILQHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVKGKVGEIFTSKNQLGTMDRVLEEMDLTHVLDRDVGVLSGGELQRFAIGVVAVQKADVYMFDEPSSYLDVKQRLKAAATIRNILSGDD--GAKRYVLVVEHDLAVLDYL 353
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BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A507ELW6_9FUNG (Uncharacterized protein (Fragment) n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507ELW6_9FUNG)

HSP 1 Score: 241 bits (614), Expect = 7.330e-77
Identity = 121/189 (64.02%), Postives = 146/189 (77.25%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALK+L+G+ KPNLGR+ DPP WE+ILRHFRGSELQ YF  +LE  +KAV+KPQYVDSIP   KG V  L+ K   RG  ++++  L L  +L+RN++ LSGGELQRFA+  A +  AD+YMFDEPSSYLDVKQRL AA+VIR L+      +A  YVI VEHDL+VLDYL
Sbjct:  100 PRPGQVLGLVGTNGIGKSTALKILAGKVKPNLGRYADPPDWEDILRHFRGSELQNYFTKILEDNLKAVIKPQYVDSIPKAVKGIVMDLLNKKSERGNLEQIIEALDLRAVLERNVENLSGGELQRFAIGFACILQADIYMFDEPSSYLDVKQRLKAAKVIRSLL------NATTYVIVVEHDLSVLDYL 282
[Close]
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A7S3EAD8_9RHOD (Probable ATP-dependent transporter ycf16 n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EAD8_9RHOD)

HSP 1 Score: 245 bits (626), Expect = 7.750e-77
Identity = 121/189 (64.02%), Postives = 150/189 (79.37%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALKVL+ + KPNLGR+++PP W++IL +FRGSELQ YF  +LE  +KA++KPQYVD+IP  AKGTVE +V+K D R +    L +L LE ++DR++ +LSGGELQRFA+ +  VQ+ADVYM DEPSSYLDV+QRL AA VIRELV   + +    YVI VEHDLAVLDYL
Sbjct:  100 PRPGQVLGLVGTNGIGKSTALKVLAAKLKPNLGRWDNPPDWQDILTYFRGSELQNYFTRVLEDNLKAIIKPQYVDAIPKAAKGTVESIVSKRDERKLMKHALQELDLETVVDRDVQILSGGELQRFALAVVYVQEADVYMIDEPSSYLDVRQRLKAASVIRELVSQRDNK----YVIVVEHDLAVLDYL 284
[Close]
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Match: A0A7C8Z0Y4_OPUST (Adenosinetriphosphatase (Fragment) n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7C8Z0Y4_OPUST)

HSP 1 Score: 240 bits (613), Expect = 2.110e-76
Identity = 120/189 (63.49%), Postives = 146/189 (77.25%), Query Frame = 1 
Query:    1 PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRGSELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDRLLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDVKQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL 567
            PRP +VLGLVGTNGIGKSTALKVL+G+ KPNLGRF +PP W+EIL +FRGSELQ YF  +LE  +KA++KPQYVD IP   +G V +++ + D R VK  L  DL+L  +LDRN+  LSGGELQRFA+ + A+Q+A++YMFDEPSSYLDVKQRL AAQVIR L+          YVI VEHDL+VLDYL
Sbjct:  100 PRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDEREVKAELCKDLELNAVLDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKAAQVIRSLLRPNS------YVIVVEHDLSVLDYL 282
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100670.153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812TPL2_9DINO3.920e-8569.31ABCE2 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A8... [more]
A0A812SV30_9DINO3.000e-8268.59ABCE2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A7J7QES3_9CHLO8.190e-7965.08P-loop containing nucleoside triphosphate hydrolas... [more]
I0Z105_COCSC6.050e-7867.20Abce1 protein n=2 Tax=Coccomyxa TaxID=41891 RepID=... [more]
A0A0Q3EC44_BRADI3.040e-7764.02Uncharacterized protein n=1 Tax=Brachypodium dista... [more]
A0A2P6PZH4_ROSCH3.380e-7762.96Putative molybdate-transporting ATPase n=1 Tax=Ros... [more]
A0A6H5KJR1_9PHAE3.880e-7765.61ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A507ELW6_9FUNG7.330e-7764.02Uncharacterized protein (Fragment) n=2 Tax=Chytrio... [more]
A0A7S3EAD8_9RHOD7.750e-7764.02Probable ATP-dependent transporter ycf16 n=4 Tax=R... [more]
A0A7C8Z0Y4_OPUST2.110e-7663.49Adenosinetriphosphatase (Fragment) n=5 Tax=Mesangi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100670contigM-pyrifera_M_contig100670:1..677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score253.8
Seed ortholog evalue6.2e-65
Seed eggNOG ortholog2880.D8LC25
Preferred nameABCE1
KEGG koko:K06174
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000166,GO:0000956,GO:0001558,GO:0001959,GO:0002181,GO:0002183,GO:0002682,GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005506,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006412,GO:0006413,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008428,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010941,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0022613,GO:0023051,GO:0030234,GO:0030554,GO:0030684,GO:0030687,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031369,GO:0031503,GO:0031974,GO:0032069,GO:0032074,GO:0032268,GO:0032270,GO:0032553,GO:0032555,GO:0032559,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0033036,GO:0033750,GO:0034248,GO:0034250,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0035639,GO:0036094,GO:0040008,GO:0042254,GO:0042273,GO:0042886,GO:0042981,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043523,GO:0043524,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045088,GO:0045184,GO:0045727,GO:0045934,GO:0046483,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050657,GO:0050658,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0051536,GO:0051540,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060338,GO:0060548,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0060759,GO:0065007,GO:0065009,GO:0070013,GO:0070481,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097367,GO:0098772,GO:1901214,GO:1901215,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903008,GO:1990904,GO:2000112
EggNOG free text desc.4Fe-4S binding domain
EggNOG OGsCOG1245@1,KOG0063@2759
Ec32 ortholog descriptionRNase L inhibitor-like protein
Ec32 orthologEc-20_004180.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons2
Model size567
Cds size567
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815504.1059878-CDS-M-pyrifera_M_contig100670:0..1541622815504.1059878-CDS-M-pyrifera_M_contig100670:0..154Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100670 1..154 -
1692277441.0206604-CDS-M-pyrifera_M_contig100670:0..1541692277441.0206604-CDS-M-pyrifera_M_contig100670:0..154Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100670 1..154 -
1622815504.117141-CDS-M-pyrifera_M_contig100670:264..6771622815504.117141-CDS-M-pyrifera_M_contig100670:264..677Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100670 265..677 -
1692277441.0325992-CDS-M-pyrifera_M_contig100670:264..6771692277441.0325992-CDS-M-pyrifera_M_contig100670:264..677Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100670 265..677 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100670.153.1prot_M-pyrifera_M_contig100670.153.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100670 1..677 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100670.153.1

>prot_M-pyrifera_M_contig100670.153.1 ID=prot_M-pyrifera_M_contig100670.153.1|Name=mRNA_M-pyrifera_M_contig100670.153.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp
PRPNEVLGLVGTNGIGKSTALKVLSGRTKPNLGRFEDPPGWEEILRHFRG
SELQGYFNHLLERKVKAVLKPQYVDSIPTMAKGTVERLVTKMDSRGVKDR
LLADLQLEHLLDRNIDVLSGGELQRFAMCIAAVQDADVYMFDEPSSYLDV
KQRLIAAQVIRELVEGAEKRDAPRYVICVEHDLAVLDYL
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mRNA from alignment at M-pyrifera_M_contig100670:1..677-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100670.153.1 ID=mRNA_M-pyrifera_M_contig100670.153.1|Name=mRNA_M-pyrifera_M_contig100670.153.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=677bp|location=Sequence derived from alignment at M-pyrifera_M_contig100670:1..677- (Macrocystis pyrifera P11B4 male)
CCTCGCCCCAACGAGGTGCTGGGATTGGTGGGAACGAATGGGATTGGGAA
GTCCACGGCGCTCAAGGTGCTCAGTGGACGCACCAAGCCCAACTTGGGTC
GATTCGAAGACCCTCCTGGGTGGGAAGAGATCCTGCGCCACTTTCGGGGA
TCAGAATTGCAGGGGTACTTCAACCACCTCCTTGAGCGCAAAGTCAAGGC
TGTGCTCAAGCCCCAGTATGTCGATTCCATCCCTACCATGGCCAAAGGAA
CCGTCGAACGGCTTGTGACCAAAATGGACTCCAGAGGAGTCAAGGACCGA
CTCCTTGCCGACCTGCAACTCGAACACCTTCTTGACAGAAACATTGACGT
TCTCTCTGGAGGAGAATTGCAGCGCTTTGCCATGTGCATTGCAGCAGTAC
AAGACGCAGATGTGTATGTGGAGAGGGGGTGGGTGTGGATGGGTGATGTT
TTTCCTTTGTTTCGTTCTCTCTTCCCATGTCTGCTTCTTCTCCTACACAT
CGCCCCTCTTCCTTCTTCCACAGGTACATGTTCGATGAACCAAGCTCTTA
CTTGGATGTGAAGCAGCGCTTGATCGCTGCCCAGGTGATTCGGGAGTTGG
TGGAAGGAGCAGAGAAGCGGGATGCTCCTCGGTACGTGATTTGCGTGGAA
CATGACTTGGCTGTGTTGGATTACCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100670:1..677-

>mRNA_M-pyrifera_M_contig100670.153.1 ID=mRNA_M-pyrifera_M_contig100670.153.1|Name=mRNA_M-pyrifera_M_contig100670.153.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig100670:1..677- (Macrocystis pyrifera P11B4 male)
CCTCGCCCCAACGAGGTGCTGGGATTGGTGGGAACGAATGGGATTGGGAA
GTCCACGGCGCTCAAGGTGCTCAGTGGACGCACCAAGCCCAACTTGGGTC
GATTCGAAGACCCTCCTGGGTGGGAAGAGATCCTGCGCCACTTTCGGGGA
TCAGAATTGCAGGGGTACTTCAACCACCTCCTTGAGCGCAAAGTCAAGGC
TGTGCTCAAGCCCCAGTATGTCGATTCCATCCCTACCATGGCCAAAGGAA
CCGTCGAACGGCTTGTGACCAAAATGGACTCCAGAGGAGTCAAGGACCGA
CTCCTTGCCGACCTGCAACTCGAACACCTTCTTGACAGAAACATTGACGT
TCTCTCTGGAGGAGAATTGCAGCGCTTTGCCATGTGCATTGCAGCAGTAC
AAGACGCAGATGTCCTCGCCCCAACGAGGTGCTGGGATTGGTGGGAACGA
ATGGGATTGGGAAGTCCACGGCGCTCAAGGTGCTCAGTGGACGCACCAAG
CCCAACTTGGGTCGATTCGAAGACCCTCCTGGGTGGGAAGAGATCCTGCG
CCACTTTCGGGGATCAGAATTGCAGGGGTACTTCAACCACCTCCTTGAGC
GCAAAGTCAAGGCTGTGCTCAAGCCCCAGTATGTCGATTCCATCCCTACC
ATGGCCAAAGGAACCGTCGAACGGCTTGTGACCAAAATGGACTCCAGAGG
AGTCAAGGACCGACTCCTTGCCGACCTGCAACTCGAACACCTTCTTGACA
GAAACATTGACGTTCTCTCTGGAGGAGAATTGCAGCGCTTTGCCATGTGC
ATTGCAGCAGTACAAGACGCAGATGTGTACATGTTCGATGAACCAAGCTC
TTACTTGGATGTGAAGCAGCGCTTGATCGCTGCCCAGGTGATTCGGGAGT
TGGTGGAAGGAGCAGAGAAGCGGGATGCTCCTCGGTACGTGATTTGCGTG
GAACATGACTTGGCTGTGTTGGATTACCTGGTACATGTTCGATGAACCAA
GCTCTTACTTGGATGTGAAGCAGCGCTTGATCGCTGCCCAGGTGATTCGG
GAGTTGGTGGAAGGAGCAGAGAAGCGGGATGCTCCTCGGTACGTGATTTG
CGTGGAACATGACTTGGCTGTGTTGGATTACCTG
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