mRNA_M-pyrifera_M_contig100665.152.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100665.152.1
Unique NamemRNA_M-pyrifera_M_contig100665.152.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A2E7KKS5_9PLAN (Sialidase n=9 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KKS5_9PLAN)

HSP 1 Score: 478 bits (1231), Expect = 3.670e-168
Identity = 222/225 (98.67%), Postives = 225/225 (100.00%), Query Frame = 1
Query:    1 TDRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            TD+GKTWK+PAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGL+LVYT
Sbjct:   94 TDQGKTWKEPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLFLVYT 318          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A517RMG2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RMG2_9PLAN)

HSP 1 Score: 437 bits (1125), Expect = 5.170e-152
Identity = 201/225 (89.33%), Postives = 212/225 (94.22%), Query Frame = 1
Query:    1 TDRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            TD+GKTW  P PIAALGRD VKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFA+GDQLARYPVYVTR KDG+WS+RKILQWDDPRG EIYTNNCGQRLVMP+GDILMSFTFG GKQPRMVAGVRC++DG+ LKIREVGPPL+NKVGRGLLEPSI RF NQ+FMTIRAEDGHGYVA S DGLNY RKTAWAFDDGTPIGMSTTQQHWLTHSDGL+LVYT
Sbjct:   97 TDQGKTWSPPKPIAALGRDAVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFAKGDQLARYPVYVTRQKDGRWSKRKILQWDDPRGGEIYTNNCGQRLVMPDGDILMSFTFGPGKQPRMVAGVRCSFDGSELKIREVGPPLKNKVGRGLLEPSITRFQNQFFMTIRAEDGHGYVAASLDGLNYNRKTAWAFDDGTPIGMSTTQQHWLTHSDGLFLVYT 321          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A518IJE1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IJE1_9PLAN)

HSP 1 Score: 425 bits (1093), Expect = 3.780e-147
Identity = 194/225 (86.22%), Postives = 211/225 (93.78%), Query Frame = 1
Query:    1 TDRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            TD+GKTW  P PIAALGRD VKEHPGLKAGVCDVTPQYHPQTG+VLALGHVVFYRGPRFA+GDQL+RYPVYVTRDKDG WS+RKIL+WDDPRGAEIYTNNCGQR+VMPNG+I+MSFTFG GKQPRMVAGVRC++D + LKI EVGPPL+N+VGRGLLEPSI RF +Q+FMTIRAED HGYVAVSPDGLNY RKT WAFDDGTPIGMSTTQQHWLTHSDGL+LVYT
Sbjct:   97 TDQGKTWSPPKPIAALGRDAVKEHPGLKAGVCDVTPQYHPQTGSVLALGHVVFYRGPRFAKGDQLSRYPVYVTRDKDGSWSKRKILKWDDPRGAEIYTNNCGQRIVMPNGNIMMSFTFGPGKQPRMVAGVRCSFDDSELKIIEVGPPLKNEVGRGLLEPSITRFGDQFFMTIRAEDLHGYVAVSPDGLNYNRKTEWAFDDGTPIGMSTTQQHWLTHSDGLFLVYT 321          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A2E2C2G6_9PLAN (Sialidase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C2G6_9PLAN)

HSP 1 Score: 421 bits (1083), Expect = 1.290e-145
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 1
Query:    4 DRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            DRGKTW +P  I AL RDPVK HPGL+AGVCDVTPQYHPQTGT+LALGHVVFYRGPRFA+GDQLARYPVY  RDK GQWSER +L+WDDPRG+EIYTNNCGQR VMPNGDI+MSFTFGA KQPRMVAGVRCA+DG+ L IREVGPPL+N VGRGLLEPSI RF ++YFMTIRAEDGHGYVAVSPDGLNYQR+TAWAFDDGT IGMSTTQQHWLTHSDGL+LVYT
Sbjct:   99 DRGKTWSEPTAIPALDRDPVKGHPGLQAGVCDVTPQYHPQTGTILALGHVVFYRGPRFAKGDQLARYPVYAVRDKAGQWSERNVLKWDDPRGSEIYTNNCGQRFVMPNGDIMMSFTFGANKQPRMVAGVRCAFDGSELTIREVGPPLKNAVGRGLLEPSITRFQDRYFMTIRAEDGHGYVAVSPDGLNYQRQTAWAFDDGTSIGMSTTQQHWLTHSDGLFLVYT 322          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A517VKZ7_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517VKZ7_9PLAN)

HSP 1 Score: 420 bits (1080), Expect = 3.690e-145
Identity = 189/224 (84.38%), Postives = 208/224 (92.86%), Query Frame = 1
Query:    4 DRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            DRGKTW +PAPI AL RDPVK HPGL+AGVCDVTPQYHPQTGT+L+LGHVVFYRGPRFA+GDQLARYPVY  RDK GQWSERKIL+WDDPRG+EIYTNNCGQR VMPNGDI+MSFTFGA KQPRMVAGV CA+DG+ L IREVGPPL+N++GRGLLEPSI RF +++FMTIRAEDGHGYVAVSPDGLNY+ +TAWAFDDGTPIGMSTTQQHWLTHSD L+LVYT
Sbjct:   99 DRGKTWTKPAPIPALDRDPVKGHPGLQAGVCDVTPQYHPQTGTILSLGHVVFYRGPRFAKGDQLARYPVYAVRDKAGQWSERKILKWDDPRGSEIYTNNCGQRFVMPNGDIMMSFTFGANKQPRMVAGVHCAFDGSELTIREVGPPLQNEIGRGLLEPSITRFQDKFFMTIRAEDGHGYVAVSPDGLNYKPQTAWAFDDGTPIGMSTTQQHWLTHSDSLFLVYT 322          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A517W0S4_9PLAN (Uncharacterized protein n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W0S4_9PLAN)

HSP 1 Score: 397 bits (1020), Expect = 5.110e-136
Identity = 182/224 (81.25%), Postives = 198/224 (88.39%), Query Frame = 1
Query:    4 DRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            DRG TW  P PI ALGRDPV+ HPGL AGVCDVTPQYH +T T+L+LGHVVFYRGPRFARGDQLARYPVY  R K+G WSERKIL+WDDPRG+ IYTNNCGQR+VMPNGDI+MSFTFG  K  RMVAGVRC++DG+ LKI EVGPPL+N VGRGLLEPSI RF NQ+FMTIRAEDGHGYVAVSPDGLNY RKTAWA+DDG PIGMSTTQQHWLTHSD L+LVYT
Sbjct:  101 DRGMTWSIPQPIPALGRDPVQGHPGLMAGVCDVTPQYHQKTDTILSLGHVVFYRGPRFARGDQLARYPVYAVRQKNGIWSERKILEWDDPRGSFIYTNNCGQRIVMPNGDIMMSFTFGPEKDHRMVAGVRCSFDGSELKILEVGPPLKNNVGRGLLEPSITRFQNQFFMTIRAEDGHGYVAVSPDGLNYHRKTAWAWDDGQPIGMSTTQQHWLTHSDELFLVYT 324          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: UPI00198029B4 (exo-alpha-sialidase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00198029B4)

HSP 1 Score: 384 bits (985), Expect = 7.550e-131
Identity = 174/225 (77.33%), Postives = 196/225 (87.11%), Query Frame = 1
Query:    1 TDRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            +D+G+TW  P PI AL R+PV  HPGLKAGVCDV PQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVY  R  DG WSERK L+WDDPRG  IYTNNCGQR+V+PNG+I+M+FTFG   + RMVAGVRC++DG  LKI EVGP LEN VGRGLLEPS+A+F +++++TIRAEDGHGYVAVS DGLNYQRKTAWA+DDG PI MSTTQQHWLTHSDGL+LVYT
Sbjct:   91 SDQGRTWSDPKPIPALAREPVAGHPGLKAGVCDVVPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYAVRRPDGTWSERKRLKWDDPRGGNIYTNNCGQRIVLPNGEIVMAFTFGPTAKNRMVAGVRCSFDGEELKILEVGPALENPVGRGLLEPSVAQFKDKFYLTIRAEDGHGYVAVSDDGLNYQRKTAWAWDDGEPIEMSTTQQHWLTHSDGLFLVYT 315          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: UPI00193B8460 (glycoside hydrolase n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI00193B8460)

HSP 1 Score: 382 bits (982), Expect = 2.380e-130
Identity = 172/224 (76.79%), Postives = 195/224 (87.05%), Query Frame = 1
Query:    4 DRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            D GKTW  P  I ALGR PV+ HPGL+AGVCDV P+YHPQTGTVLA+GHVVFYRGPRFARGDQLARYPVY  R KDG WS RKIL+WDDPRG+ IY+N CGQR+VMP+GDILMSFTFG+G +PRMVAGVRC++DG TLK+ EVGPPLEN  GRGLLEPS+ RF +++++TIRAED  GYVAVS DGL+YQRKTAW +DDG PI MSTTQQHWLTHSDGL+LVYT
Sbjct:   94 DLGKTWSSPEAIPALGRVPVEGHPGLQAGVCDVVPEYHPQTGTVLAMGHVVFYRGPRFARGDQLARYPVYSVRRKDGSWSPRKILEWDDPRGSAIYSNGCGQRVVMPDGDILMSFTFGSGAEPRMVAGVRCSFDGETLKVEEVGPPLENPAGRGLLEPSVTRFQDRFYLTIRAEDDRGYVAVSDDGLDYQRKTAWTWDDGEPIEMSTTQQHWLTHSDGLFLVYT 317          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A847GIT5_9BACT (Exo-alpha-sialidase n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GIT5_9BACT)

HSP 1 Score: 365 bits (937), Expect = 1.270e-123
Identity = 161/224 (71.88%), Postives = 188/224 (83.93%), Query Frame = 1
Query:    4 DRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            D G+TW +PAPI ALGR+PV  H GL AGVCDV P++H  TGTV+A+GHVVFYR  RF+  +QLARYPVY  R +DG WSERKILQWDDPRG  IY+N CGQR+V+P GD++MSFTFG G   RMVAGVRC +DG  L++ EVGPPLENK GRGLLEPS+ RF  ++++T+RAEDGHGY AVS DGLNYQRKTAWA+DDG+PIGMSTTQQHWLTHSDGL+LVYT
Sbjct:   92 DLGETWSEPAPIPALGREPVAGHEGLLAGVCDVVPEFHAPTGTVVAMGHVVFYRTARFSNAEQLARYPVYAVRRRDGTWSERKILQWDDPRGGHIYSNGCGQRVVLPGGDVMMSFTFGPGASNRMVAGVRCTFDGEELRVAEVGPPLENKAGRGLLEPSVTRFRERFYLTLRAEDGHGYAAVSDDGLNYQRKTAWAWDDGSPIGMSTTQQHWLTHSDGLFLVYT 315          
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Match: A0A7Y2AMR9_9BACT (Exo-alpha-sialidase (Fragment) n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7Y2AMR9_9BACT)

HSP 1 Score: 370 bits (950), Expect = 8.190e-121
Identity = 168/224 (75.00%), Postives = 190/224 (84.82%), Query Frame = 1
Query:    4 DRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGHVVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNNCGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLENKVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDDGTPIGMSTTQQHWLTHSDGLYLVYT 675
            D+G TW    PI +LGRDPV+ H  LKAGVCDVTPQYHP TGTVLALGHVVFYRGPRFA+GDQL RYP+Y  R KDG WS RKIL W+DPRG  IY+NNCGQR+VMPNGDI+M+FTFG   + RMVAGVRC++DG  LK+ EVGP L N +GRGLLEPS+ RF N++++TIRAEDG GYVAVS DGLNYQRKTAWA+DDG PIGMSTTQQHWLTHSDGL+LVYT
Sbjct:  450 DQGATWSDFEPIESLGRDPVEGHGDLKAGVCDVTPQYHPNTGTVLALGHVVFYRGPRFAKGDQLPRYPLYAVRRKDGTWSSRKILGWNDPRGKFIYSNNCGQRVVMPNGDIMMAFTFGPESKNRMVAGVRCSFDGEELKVVEVGPALHNDIGRGLLEPSVTRFQNRFYLTIRAEDGRGYVAVSDDGLNYQRKTAWAWDDGQPIGMSTTQQHWLTHSDGLFLVYT 673          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100665.152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KKS5_9PLAN3.670e-16898.67Sialidase n=9 Tax=Gimesia TaxID=1649453 RepID=A0A2... [more]
A0A517RMG2_9PLAN5.170e-15289.33Uncharacterized protein n=1 Tax=Gimesia alba TaxID... [more]
A0A518IJE1_9PLAN3.780e-14786.22Uncharacterized protein n=1 Tax=Gimesia fumaroli T... [more]
A0A2E2C2G6_9PLAN1.290e-14585.27Sialidase n=3 Tax=Planctomycetaceae TaxID=126 RepI... [more]
A0A517VKZ7_9PLAN3.690e-14584.38Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A517W0S4_9PLAN5.110e-13681.25Uncharacterized protein n=3 Tax=Gimesia aquarii Ta... [more]
UPI00198029B47.550e-13177.33exo-alpha-sialidase n=1 Tax=Rubinisphaera sp. JC65... [more]
UPI00193B84602.380e-13076.79glycoside hydrolase n=1 Tax=Candidatus Laterigemma... [more]
A0A847GIT5_9BACT1.270e-12371.88Exo-alpha-sialidase n=1 Tax=Candidatus Anammoximic... [more]
A0A7Y2AMR9_9BACT8.190e-12175.00Exo-alpha-sialidase (Fragment) n=1 Tax=Pirellulace... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100665contigM-pyrifera_M_contig100665:2..676 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score426.0
Seed ortholog evalue1.1e-116
Seed eggNOG ortholog344747.PM8797T_13872
Preferred nameyndB
KEGG rclassRC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686
KEGG koko:K01061,ko:K11750
KEGG ReactionR03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222
KEGG Pathwayko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.exo-alpha-(2->6)-sialidase activity
EggNOG OGs2IWTV@203682,COG0412@1,COG0412@2,COG4409@1,COG4409@2
EC3.1.1.45
COG Functional cat.GQ
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size675
Cds size675
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815503.7923756-CDS-M-pyrifera_M_contig100665:1..6761622815503.7923756-CDS-M-pyrifera_M_contig100665:1..676Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100665 2..676 -
1692277441.0068808-CDS-M-pyrifera_M_contig100665:1..6761692277441.0068808-CDS-M-pyrifera_M_contig100665:1..676Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100665 2..676 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100665.152.1prot_M-pyrifera_M_contig100665.152.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100665 2..676 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100665.152.1

>prot_M-pyrifera_M_contig100665.152.1 ID=prot_M-pyrifera_M_contig100665.152.1|Name=mRNA_M-pyrifera_M_contig100665.152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp
TDRGKTWKQPAPIAALGRDPVKEHPGLKAGVCDVTPQYHPQTGTVLALGH
VVFYRGPRFARGDQLARYPVYVTRDKDGQWSERKILQWDDPRGAEIYTNN
CGQRLVMPNGDILMSFTFGAGKQPRMVAGVRCAYDGTTLKIREVGPPLEN
KVGRGLLEPSIARFDNQYFMTIRAEDGHGYVAVSPDGLNYQRKTAWAFDD
GTPIGMSTTQQHWLTHSDGLYLVYT
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mRNA from alignment at M-pyrifera_M_contig100665:2..676-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100665.152.1 ID=mRNA_M-pyrifera_M_contig100665.152.1|Name=mRNA_M-pyrifera_M_contig100665.152.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig100665:2..676- (Macrocystis pyrifera P11B4 male)
ACGGATCGGGGCAAGACCTGGAAGCAGCCGGCACCCATTGCCGCACTCGG TCGGGATCCGGTCAAGGAACATCCCGGTCTCAAGGCGGGCGTCTGTGATG TGACGCCGCAGTATCATCCACAGACCGGAACCGTTCTTGCGTTGGGGCAC GTCGTCTTCTATCGCGGTCCCCGCTTTGCCCGCGGCGATCAGCTGGCCCG CTACCCCGTCTACGTCACGCGAGACAAAGACGGCCAGTGGTCAGAACGTA AGATTCTGCAGTGGGATGATCCCCGCGGTGCCGAGATCTATACCAATAAT TGTGGACAGCGACTCGTGATGCCCAACGGCGATATCCTGATGTCCTTCAC CTTCGGCGCTGGCAAACAGCCCCGCATGGTGGCCGGCGTACGTTGTGCCT ATGACGGTACGACACTCAAGATTCGTGAAGTCGGCCCGCCCCTGGAGAAC AAAGTCGGCCGGGGTCTGCTCGAACCGTCCATCGCCCGCTTTGATAACCA GTACTTCATGACAATTCGTGCCGAAGATGGACACGGCTACGTCGCGGTCA GCCCGGACGGCTTGAATTATCAGCGGAAGACCGCCTGGGCGTTTGACGAC GGCACGCCAATTGGCATGTCCACCACGCAGCAGCACTGGCTCACTCATTC CGACGGACTGTACCTGGTCTACACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100665:2..676-

>mRNA_M-pyrifera_M_contig100665.152.1 ID=mRNA_M-pyrifera_M_contig100665.152.1|Name=mRNA_M-pyrifera_M_contig100665.152.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig100665:2..676- (Macrocystis pyrifera P11B4 male)
ACGGATCGGGGCAAGACCTGGAAGCAGCCGGCACCCATTGCCGCACTCGG
TCGGGATCCGGTCAAGGAACATCCCGGTCTCAAGGCGGGCGTCTGTGATG
TGACGCCGCAGTATCATCCACAGACCGGAACCGTTCTTGCGTTGGGGCAC
GTCGTCTTCTATCGCGGTCCCCGCTTTGCCCGCGGCGATCAGCTGGCCCG
CTACCCCGTCTACGTCACGCGAGACAAAGACGGCCAGTGGTCAGAACGTA
AGATTCTGCAGTGGGATGATCCCCGCGGTGCCGAGATCTATACCAATAAT
TGTGGACAGCGACTCGTGATGCCCAACGGCGATATCCTGATGTCCTTCAC
CTTCGGCGCTGGCAAACAGCCCCGCATGGTGGCCGGCGTACGTTGTGCCT
ATGACGGTACGACACTCAAGATTCGTGAAGTCGGCCCGCCCCTGGAGAAC
AAAGTCGGCCGGGGTCTGCTCGAACCGTCCATCGCCCGCTTTGATAACCA
GTACTTCATGACAATTCGTGCCGAAGATGGACACGGCTACGTCGCGGTCA
GCCCGGACGGCTTGAATTATCAGCGGAAGACCGCCTGGGCGTTTGACGAC
GGCACGCCAATTGGCATGTCCACCACGCAGCAGCACTGGCTCACTCATTC
CGACGGACTGTACCTGGTCTACACTACGGATCGGGGCAAGACCTGGAAGC
AGCCGGCACCCATTGCCGCACTCGGTCGGGATCCGGTCAAGGAACATCCC
GGTCTCAAGGCGGGCGTCTGTGATGTGACGCCGCAGTATCATCCACAGAC
CGGAACCGTTCTTGCGTTGGGGCACGTCGTCTTCTATCGCGGTCCCCGCT
TTGCCCGCGGCGATCAGCTGGCCCGCTACCCCGTCTACGTCACGCGAGAC
AAAGACGGCCAGTGGTCAGAACGTAAGATTCTGCAGTGGGATGATCCCCG
CGGTGCCGAGATCTATACCAATAATTGTGGACAGCGACTCGTGATGCCCA
ACGGCGATATCCTGATGTCCTTCACCTTCGGCGCTGGCAAACAGCCCCGC
ATGGTGGCCGGCGTACGTTGTGCCTATGACGGTACGACACTCAAGATTCG
TGAAGTCGGCCCGCCCCTGGAGAACAAAGTCGGCCGGGGTCTGCTCGAAC
CGTCCATCGCCCGCTTTGATAACCAGTACTTCATGACAATTCGTGCCGAA
GATGGACACGGCTACGTCGCGGTCAGCCCGGACGGCTTGAATTATCAGCG
GAAGACCGCCTGGGCGTTTGACGACGGCACGCCAATTGGCATGTCCACCA
CGCAGCAGCACTGGCTCACTCATTCCGACGGACTGTACCTGGTCTACACT
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