mRNA_M-pyrifera_M_contig107032.1500.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: UPI001EB08360 (protein phosphatase 1 regulatory subunit 42-like isoform X1 n=7 Tax=Haliotis TaxID=6452 RepID=UPI001EB08360) HSP 1 Score: 66.2 bits (160), Expect = 1.240e-10 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARK 207
N + D+ ++A +L P L L+L NPV AKYRDR+I+ +++LE+LDGKE+ E R FL HA K
Sbjct: 181 NFLNDMKELAHILGLWPFLWRLELMGNPVCHKAKYRDRIIVMSKHLEMLDGKEISETSRKFLCNWHASK 249
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: A0A8K0EK77_BRALA (PPP1R42 protein n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A8K0EK77_BRALA) HSP 1 Score: 65.9 bits (159), Expect = 1.690e-10 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGRDR 222
N +ED+ ++A++L G +L L+L NP+ AKYRDRVI+ + LE+LDGKE++E R FLL A K R R
Sbjct: 178 NQLEDMKELAQVLAGWVNLWRLELVGNPLCRKAKYRDRVIVMSGSLEVLDGKEINETARKFLLSWKANKEARRR 251
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: C3YQ29_BRAFL (Uncharacterized protein n=5 Tax=Branchiostoma TaxID=7737 RepID=C3YQ29_BRAFL) HSP 1 Score: 65.9 bits (159), Expect = 1.770e-10 Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGRDR 222
N +ED+ ++A++L G L L+L NP+ AKYRDRVI+ + LE+LDGKE++E R FLL A K R R
Sbjct: 179 NQLEDMKELAQVLTGWVQLWRLELVGNPLCRKAKYRDRVIVMSASLEVLDGKEINETARKFLLSWKANKEARRR 252
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: A0A1B6D063_9HEMI (Uncharacterized protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6D063_9HEMI) HSP 1 Score: 65.1 bits (157), Expect = 2.120e-10 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGRD 219
NL+ D+ DV E + +L E+DLR N V S KYRD+VI++T L+LLDGK+V+ R FL L K+ R+
Sbjct: 181 NLISDVTDVCETVAFWFNLEEMDLRMNKVTSKKKYRDKVILSTHNLKLLDGKDVNSVTRNFLRNLDIFKKERE 253
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: A0A1B6CFU5_9HEMI (Uncharacterized protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CFU5_9HEMI) HSP 1 Score: 65.1 bits (157), Expect = 3.010e-10 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGRD 219
NL+ D+ DV E + +L E+DLR N V S KYRD+VI++T L+LLDGK+V+ R FL L K+ R+
Sbjct: 181 NLISDVTDVCETVAFWFNLEEMDLRMNKVTSKKKYRDKVILSTHNLKLLDGKDVNSVTRNFLRNLDIFKKERE 253
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: A0A7S3JAU0_9SPIT (Hypothetical protein n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JAU0_9SPIT) HSP 1 Score: 63.2 bits (152), Expect = 5.090e-10 Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRG 213
N ++++ DVA L L LDLR+NP+A + KYRD++IM +E LD K+V E +R +L+ L +K+G
Sbjct: 30 NQIQELEDVAPFLSTIQYLNTLDLRDNPLAGIKKYRDQIIMIGLKIETLDDKKVTEHEREYLITLEMKKKG 100
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: A0A8B9TG66_ANAPL (Protein phosphatase 1 regulatory subunit 42 n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=A0A8B9TG66_ANAPL) HSP 1 Score: 63.5 bits (153), Expect = 7.710e-10 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGRDRGRG 231
N ++ + D+ +L P LR +DL NP+ KYRDR+++ ++ LE LDGKE+ E +R FL+ A K R + RG
Sbjct: 163 NQLQHMKDLEAVLNKWPKLRRMDLAGNPICHKPKYRDRIVVQSQTLEFLDGKEIKEMERQFLMNWKASKAARKKSRG 239
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: A0A8B9BRV4_9AVES (Protein phosphatase 1 regulatory subunit 42 n=11 Tax=Anseriformes TaxID=8826 RepID=A0A8B9BRV4_9AVES) HSP 1 Score: 63.2 bits (152), Expect = 9.570e-10 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGRDRGRG 231
N ++ + D+ +L P LR +DL NP+ KYRDRV++ ++ LE LDGKE+ E +R FL+ A K R + RG
Sbjct: 178 NQLQHMKDLEAVLNKWPKLRRMDLTGNPICHKPKYRDRVVVQSQTLESLDGKEIKEMERQFLMNWKASKAARKKNRG 254
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: H3A8Q8_LATCH (Uncharacterized protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3A8Q8_LATCH) HSP 1 Score: 62.8 bits (151), Expect = 1.180e-9 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGR 216
N ++DI D+ +L P L +DL +NPV KYRDR+IM + L +LDGKE++E R FL+ A K R
Sbjct: 179 NQLKDIEDLEFMLSRWPRLWRMDLSKNPVCRKPKYRDRIIMVAKNLTILDGKEINETARQFLINWKASKEAR 250
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Match: UPI001CFA13B0 (protein phosphatase 1 regulatory subunit 42 isoform X3 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA13B0) HSP 1 Score: 62.0 bits (149), Expect = 2.600e-9 Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 1 NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDGKEVDEKQRAFLLRLHARKRGR 216
N + D+ +V +L L+ LDL NPV KYRDR+I+A+++LE LDGKEV++ R FL+ A + G+
Sbjct: 179 NQLRDLKEVEHVLKKWHSLQRLDLIRNPVCIKPKYRDRIIVASKHLEFLDGKEVNQMAREFLINWKASRDGK 250 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107032.1500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107032.1500.1 >prot_M-pyrifera_M_contig107032.1500.1 ID=prot_M-pyrifera_M_contig107032.1500.1|Name=mRNA_M-pyrifera_M_contig107032.1500.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp NLVEDIADVAELLVGCPDLRELDLRENPVASVAKYRDRVIMATEYLELLDback to top mRNA from alignment at M-pyrifera_M_contig107032:332..622- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107032.1500.1 ID=mRNA_M-pyrifera_M_contig107032.1500.1|Name=mRNA_M-pyrifera_M_contig107032.1500.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig107032:332..622- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107032:332..622- >mRNA_M-pyrifera_M_contig107032.1500.1 ID=mRNA_M-pyrifera_M_contig107032.1500.1|Name=mRNA_M-pyrifera_M_contig107032.1500.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig107032:332..622- (Macrocystis pyrifera P11B4 male)back to top |