mRNA_M-pyrifera_M_contig1070.1493.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: A0A6H5K7C3_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7C3_9PHAE) HSP 1 Score: 370 bits (951), Expect = 8.150e-122 Identity = 176/305 (57.70%), Postives = 224/305 (73.44%), Query Frame = 2
Query: 497 LSNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNSLVPLKAAYFVQHN--DTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEISPPLEFAS-----------FRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGGGEMAVSIASSIARLVDGDESAAVLKRDVGERMLRP 1372
L+ +RWQPLM ++G+GY+S QEHVT HIG T R+ GF+S EDEEAF+SR++ P + RY EV +VL T TA +KQ A+ FFDNKFNSL+PLK A+F++ + +++TDFY +T+ VQLAIYN ++LAW+EKIRHD PRP T++++KLGD LVE YAGPG GVQTIKASEWEP I TM HSE+PS S+C+C+ FA+Q+ NF+G D I P L+F F SWSE+SQVCGDSR WGGMHFA +VPAG +LCG +MA SI S+ RL GDESAA+ D+GE M+RP
Sbjct: 119 LTKIKRWQPLMESDGVGYVSIQEHVTPHIGSTGRYLGFSSKEDEEAFSSRTIDAPDYLNRYNEVVHDVLNETATTAESPYKQFAISFFDNKFNSLIPLKIAFFLRSTTQEDYTATDFYQVTLEVQLAIYNGILLAWKEKIRHDRPRPPTMVKHKLGDALVEAYAGPGQGVQTIKASEWEPFIRTMPHSEYPSGSSCLCEAFAKQIENFLGDDTIEPALQFPPGPPPPGFDAPPLEFASWSEISQVCGDSRAWGGMHFAGAVPAGAELCGSTDMAKSIHDSLERLKVGDESAAIFTTDIGELMVRP 423
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: D8LSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP1_ECTSI) HSP 1 Score: 366 bits (940), Expect = 1.810e-120 Identity = 178/303 (58.75%), Postives = 222/303 (73.27%), Query Frame = 2
Query: 500 SNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNSLVPLKAAYFVQHN--DTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEISPPLEF----------ASFRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGGGEMAVSIASSIARLVDGDESAAVLKRDVGERMLRP 1372
+N ++WQPL ++GLGY+STQEHVT HIG T R++GF+S EDEEAF+SR + P + RY + +VL + +TA +KQ AV FFDNKF SL+PLK A+F + + ++ TDFY +T+ VQLAIYN ++LAW+EKI HD PRP ++IR+ LGD LVE YAGP GVQT+KASEWEP I TM HSE+PSASAC+C+ FA QV NF+G D+I P LEF AS F SWSE+SQVCGDSR+WGGMHFA +V AG +LCGG +MA SI S RL GDESAA+ K DVGE M+RP
Sbjct: 99 TNFKKWQPLEESDGLGYVSTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRKIDGPDYLNRYDQAVRDVLDESAITADSPYKQFAVSFFDNKFTSLIPLKIAFFNRGTTKEDYTETDFYQVTVEVQLAIYNGILLAWKEKINHDRPRPPSMIRHLLGDELVEAYAGPDQGVQTMKASEWEPFIRTMPHSEYPSASACLCEGFARQVENFLGDDKIEPALEFPPGPPPAGLNASLEFASWSEISQVCGDSRIWGGMHFAGAVLAGAELCGGEDMAKSIHDSFERLKAGDESAAIFKSDVGELMVRP 401
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE) HSP 1 Score: 365 bits (938), Expect = 5.040e-119 Identity = 180/310 (58.06%), Postives = 224/310 (72.26%), Query Frame = 2
Query: 476 TVPSTC---YLSNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNSLVPLKAAYFVQHNDTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEISPPLEFAS-------FRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGGGEMAVSIASSIARLVDGDESAAVLKRDVGERMLRPL 1375
+ P C S+ +RWQPLM +NGLGY+++Q HVT HIGVT RF+GFN++EDEEA+ +R+L P ++ RY E A EVL A+ + A D K A+ FDNKFNSL PLK YF D S DF L++ QLAIYNSV+LAWREK+RHD PRPT+VIRN+LGD LV+ YAGP G+QTIKASEWEP I TM HSE+PS S+C+C+ FA + + G D I PP+ F F+SW+E+SQ+CGDSRVW G+HF ++VPAG +LCGG E+AVSIA+SI L GDESAAV KRDVGE +LRPL
Sbjct: 176 SFPKNCRRSQFSSTKRWQPLMESNGLGYLNSQVHVTPHIGVTGRFFGFNTSEDEEAWGARTLDRPPYQNRYDEAAREVLEASTVAAYDPAKLFAISLFDNKFNSLPPLKIVYFFDRGDL-SLMDFLELSVKSQLAIYNSVLLAWREKVRHDAPRPTSVIRNELGDELVDAYAGPDIGIQTIKASEWEPYIRTMPHSEYPSGSSCICEGFASALRLWAGNDIIDPPIGFPPPEFGGPILEFSSWTEISQMCGDSRVWAGLHFEEAVPAGAELCGGDEIAVSIAASIDALTAGDESAAVFKRDVGELVLRPL 484
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.450e-101 Identity = 165/309 (53.40%), Postives = 213/309 (68.93%), Query Frame = 2
Query: 476 TVPSTCY-LSNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNSLVPLKAAYFVQHNDTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEW---EPVIHTMAHSEFPSASACVCQVFAEQVVN-FIGTDEISPPLEFAS----FRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGGGEMAVSIASSIARLVDGDESAAVLKRDVGERMLRPL 1375
T +T Y + ++WQPL+ ++GLGYI+ QEHVT HIGVTARF+GF++ E+EEA+ SR L P +R R+ E+A EVL A+KL A D KQ A+ FFDNK SL+PL YF Q DT S +F+ + + +QL IYN V+L+WREKIRHD PRP +V+RN++GD +VE YAGP GVQ + ASEW I +E + Q + ++ + GTD I+PPLE F SWSE+S++CGDSRVWGG+HF +SVPAGV+LCGG EMA+SIA+SI L GDES AV KRD+GE MLRPL
Sbjct: 226 TPKNTPYKFARTKKWQPLLESDGLGYITAQEHVTPHIGVTARFFGFDTAENEEAWGSRKLDAPPYRNRHDEIAREVLEASKLAADDPAKQFAISFFDNKATSLLPLMTDYFAQRRDTLSRLEFFKVNLKLQLGIYNGVVLSWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDSGVQNMTASEWVDRSVRIFQGTDTERKQERFHMQQEYHKKTGRVWAGTDTINPPLEQPEEDPLVSFASWSEISEMCGDSRVWGGLHFEESVPAGVELCGGDEMAISIAASIDGLTAGDESVAVFKRDIGELMLRPL 534
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: D8LLS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS4_ECTSI) HSP 1 Score: 266 bits (679), Expect = 3.290e-80 Identity = 135/293 (46.08%), Postives = 188/293 (64.16%), Query Frame = 2
Query: 500 SNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNSLVPLKAAYFVQHNDT--WSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEISPPLEFASFRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGGGEMAVSIASSIARLVDGDESAAVLKRDVGERMLRP 1372
++ ++WQPL ++GLGYI+TQEHVT HIG T R++GF+S EDEEAF+SR++ P + RY++V +VL + +TA +KQ A+ FFD+K NSL+PL YF+++ +++T+F L++ +QLA+YN V+L W+EKI HD PRP+T+I++KLGD LVE YAGPG+GVQT+KASEWE + T SE+PSASAC+C+ +VPAG +LCGG +MA+SI S+ RL GDESAA+ K DVGE M+RP
Sbjct: 243 TDTKKWQPLEESDGLGYITTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRTIDRPDYLNRYKDVVHDVLDESAMTADSLYKQVAISFFDDKVNSLIPLSVDYFLRNTTQAEYTTTEFLQLSLEIQLALYNGVLLTWKEKIHHDRPRPSTMIKHKLGDELVEAYAGPGEGVQTMKASEWESFMRTNPTSEYPSASACLCE------------------------------------------------GAVPAGAELCGGMDMAMSIHDSLERLKAGDESAAIFKTDVGELMVRP 487
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: D8LQR8_ECTSI (NapH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR8_ECTSI) HSP 1 Score: 195 bits (496), Expect = 3.180e-57 Identity = 97/152 (63.82%), Postives = 110/152 (72.37%), Query Frame = 2
Query: 938 VIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEISPPLEF----------ASFRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGGGEMAVSIASSIARLVDGDESAAVLKRDVGERM 1363
+IR+ LGD LVE YAGP GVQ +KASEWEP I TM HSE+PSASAC+C+ FA QV NF+G D+I P L+F AS F SWSE+SQVCGDSRVW GMHFA +VPAG +LCGG +MA SI S RL GDESAAV K DVGE M
Sbjct: 1 MIRHLLGDELVEAYAGPDQGVQNVKASEWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDKIEPALQFPPGPPPAGLNASLEFASWSEISQVCGDSRVWSGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKAGDESAAVFKSDVGELM 152
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: A0A8J5X3W0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3W0_DIALT) HSP 1 Score: 194 bits (492), Expect = 2.730e-52 Identity = 115/287 (40.07%), Postives = 153/287 (53.31%), Query Frame = 2
Query: 479 VPSTCYLSNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNSLVPLKAAYFVQHNDTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEISP-------PL--EFAS----------------FRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCG 1264
V S +R WQPL +G GYI+ Q+HVT HIG TAR F T DE A L PP + AE +L ++ A++ K+ V+FFDNKF SL+PL Y + S F L +A AIY++ I+ W+EK+RHDL RP +VI+++ D V +Y GP + IK S+WE I M H+E+PS S+C+C+ F E +V F G +P PL FA+ F SW EV VCG+SR+ GGMHF +VP G LCG
Sbjct: 220 VNSADRYKRKRLWQPLPEHDGRGYIANQQHVTPHIGWTAR--PFVLTNDEVCDAR--LAPPQYVLN----AEALLVLSRTGALNSTKKMEVEFFDNKFTSLIPLLVQYTARLGVNADSFHFIWLDVATAAAIYDATIVGWKEKVRHDLVRPPSVIQSQFRDETVMSYRGPSEEPGDIKGSDWEAYIRIMPHAEYPSGSSCLCRAFVEALVTFEGITAAAPVPPMGAGPLVQPFAAGSSSVEPGKTPDTDIVLTFASWDEVVHVCGESRLDGGMHFTAAVPDGERLCG 498
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: R7QSC8_CHOCR (PAP2/haloperoxidase-like protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSC8_CHOCR) HSP 1 Score: 186 bits (471), Expect = 2.240e-49 Identity = 107/280 (38.21%), Postives = 147/280 (52.50%), Query Frame = 2
Query: 497 LSNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNSLVPLKAAYFVQ---HNDTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEI------SP----------------PLEFASFRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLC 1261
L + WQPLM N +G++ QEHVT+HIG YG + D+E + S P P +Y+Y E E++ + A D + V+ FDNKF+SLV L+ H D+W + ++ A A+Y SV+L W+EKI HD RP + + L + + YAG G + ++A +WEP I TM HSE+PS SAC C VFAE + F G+D SP P + + SWS V++ CG SR+ GGMHF SVPAG LC
Sbjct: 217 LKKKENWQPLMEDNNIGFLFYQEHVTAHIGQ----YGRSLYVDDEDYCSAEAPKP--KYKYDEELRELIRRSAAMAQDDVAKAKVQIFDNKFSSLVFLQIDLLFANGFHADSWKFIEADTISAA---ALYESVMLVWKEKIAHDACRPPSRMVRDLAGQKIFAYAGANQGKKQMRAEDWEPYIRTMPHSEYPSGSACFCAVFAESMKLFFGSDNFLANGKPSPLSLKVAAGQSLVEPGRPSADVTLVYNSWSAVAEDCGKSRLTGGMHFTASVPAGAALC 487
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: A0A7S3Z7G8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7G8_9EUKA) HSP 1 Score: 177 bits (448), Expect = 7.190e-46 Identity = 110/327 (33.64%), Postives = 172/327 (52.60%), Query Frame = 2
Query: 470 QRTVPSTCYLSNE--RRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQN----AVKFFDNKFNSLVPLKAAYFVQHN-DTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPG---------DGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFIGTDEISPP------------------LEFASFRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGGGEMAVSIASSIARLVDGDESAAVLKRD 1348
+R P + +++E R W PL+ ++ +G+ Q+HV IG T + + + + P P +Y Y E + + T++TA + + + AV+ FD+KF S++P Y V + D W F+ + A+Y+ VIL WREK+ D RPTT+ + +G TYAGP DG + IK +E+EPVI TM HSE+PSASACVCQ F + + + +G+D I+PP +E + F WSE++ +CG SR++GGMHF +VPAG +LC + S +++ A+L G + +L D
Sbjct: 201 ERYTPYSPQVNSEAKRAWTPLLESDSIGFFFEQQHVVPFIGFTGKNVLTKDRDRCQYYKDNQAPKP--KYDYPEELQTLFETTRITAENNTEGDRRLAAVEIFDSKFTSILPAWIDYAVANGFDNWG---FWSTQTLLSTALYDGVILVWREKVIFDAIRPTTLAQT-IGRGTAFTYAGPYGSNFGGPFVDGPEVIKQTEFEPVIRTMPHSEYPSASACVCQAFFDALADKLGSDSITPPATLGIQAGGTRNSPGLRPVEDVNLIFNLWSEMNTLCGQSRLFGGMHFTKAVPAGANLCK--NIGKSASTAFAQLESGALTEGLLDLD 519
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Match: A0A7S1ZRM1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRM1_TRICV) HSP 1 Score: 160 bits (406), Expect = 3.630e-40 Identity = 98/284 (34.51%), Postives = 147/284 (51.76%), Query Frame = 2
Query: 503 NERRWQPLMSTNGLGYISTQEHVTSHIGVTA-----RFYGFNSTEDEEAFASRSLPPPSFRYRYQEVAEEVLAATKLTAIDQFKQNAVKFFDNKFNS----LVPLKAAYFVQHNDTWSSTDFYGLTIAVQLAIYNSVILAWREKIRHDLPRPTTVIRNKLGDRLVETYAGPGDGVQTIKASEWEPVIHTMAHSEFPSASACVCQVFAEQVVNFI-----------------GTDEISP---PLEFASFRFTSWSEVSQVCGDSRVWGGMHFADSVPAGVDLCGG 1267
+ +R+QPL+ N G++ Q HVT HIG R F + E +A R L P +Y Y+E AEE + +LT ++ AV+FFDNK N ++ L++ + + S + + ++SV+LAWREK+ HDL RPTTV++ ++GD+ + +Y GP G + A +W P I TM H+E+PS SAC+C AE V ++ G+ E P P + + F + +E+ +CG SR+WGGMHF SV LC G
Sbjct: 223 HRKRYQPLIEDNEKGFVFAQAHVTPHIGYNVELEIVREPIFCANEFSDAVV-RGLDDP--KYDYKEEAEEAIEQVRLTGESDVRKIAVEFFDNKINLAGGLIMRLRSDFLL------SLEEQLMYHVGYTTIEHDSVVLAWREKVEHDLIRPTTVVQ-RMGDKTINSYRGPFMGTGDMSARDWHPYIRTMPHAEYPSGSACLCTAVAEYVDAYMADQHGNNTYPTIWEFAAGSSETEPGVVPAKALTLSFATMTELRDMCGKSRLWGGMHFTKSVQDSYQLCKG 496 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1070.1493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1070.1493.1 >prot_M-pyrifera_M_contig1070.1493.1 ID=prot_M-pyrifera_M_contig1070.1493.1|Name=mRNA_M-pyrifera_M_contig1070.1493.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=307bp MHHRQRTVPSTCYLSNERRWQPLMSTNGLGYISTQEHVTSHIGVTARFYGback to top mRNA from alignment at M-pyrifera_M_contig1070:13034..25172- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1070.1493.1 ID=mRNA_M-pyrifera_M_contig1070.1493.1|Name=mRNA_M-pyrifera_M_contig1070.1493.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=12139bp|location=Sequence derived from alignment at M-pyrifera_M_contig1070:13034..25172- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1070:13034..25172- >mRNA_M-pyrifera_M_contig1070.1493.1 ID=mRNA_M-pyrifera_M_contig1070.1493.1|Name=mRNA_M-pyrifera_M_contig1070.1493.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1842bp|location=Sequence derived from alignment at M-pyrifera_M_contig1070:13034..25172- (Macrocystis pyrifera P11B4 male)back to top |