mRNA_M-pyrifera_M_contig100658.149.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A5A8CZQ6_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CZQ6_CAFRO) HSP 1 Score: 79.0 bits (193), Expect = 4.900e-17 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 16 LRQRKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRC 192 ++ R+R CR CG +P EDDNCV++CVS C+ +VYG E LEPGEVDL R ++F+ C Sbjct: 51 IQSRRRNCRSQVCGSIPVHEDDNCVNECVSPRCYQEVYGAEPLEPGEVDLVRWQQFSSC 109
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A7S4C0L6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0L6_CHRCT) HSP 1 Score: 69.3 bits (168), Expect = 2.850e-13 Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 28 KRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRC 192 KR C R C + T + DNCV KC S C++ +YGEEELEPGEVD +R R+F C Sbjct: 52 KRECERTTCATVHTDDFDNCVLKCQSPECYEDIYGEEELEPGEVDRDRSRKFQSC 106
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A7S2GQ80_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GQ80_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 4.290e-12 Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 25 RKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRCAMDEMR 210 RKR C C + + NC+ +C S AC+ ++Y +EELEPGEVD++R R F +C DE R Sbjct: 53 RKRDCEMTQCADVSVDDQPNCILRCQSEACYIRIYADEELEPGEVDMQRQRAFTKCMNDEAR 114
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A6S9GZX5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GZX5_HETAK) HSP 1 Score: 65.5 bits (158), Expect = 2.390e-11 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 13 SLRQRKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRC 192 + R +K C R ACGH+ E NC++KC+S+ C+++VY E LE GEVD R + F C Sbjct: 47 NFRIKKGDCERVACGHMIVDEAQNCINKCISAECYEEVYAHEPLEDGEVDASRYKRFQAC 106
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A7S0L3E4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L3E4_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 2.430e-11 Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 1 Query: 28 KRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRC 192 KR C R C + +NCV KC S C++QVYG +ELEPGEVD ER R F+ C Sbjct: 38 KRDCERVTCKGAHEDDQENCVLKCQSPECYEQVYGADELEPGEVDRERSRRFSSC 92
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A7S2TYE2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYE2_9EUKA) HSP 1 Score: 62.8 bits (151), Expect = 7.500e-11 Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 16 LRQRKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRCAMDE 204 + +R+ C C L ED NC +CVS CF +VYG ELEPGE+D +R R+F RCA +E Sbjct: 32 VNKRRNECEMVTCRGLEE-EDPNCTPRCVSEHCFAEVYGGNELEPGEIDTKRSRQFTRCARNE 93
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: R1FUY2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FUY2_EMIHU) HSP 1 Score: 64.3 bits (155), Expect = 1.880e-10 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 25 RKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRCAMDEMRKE 216 ++R C R C + E NCV +C S C+ +VYG EELEPGE+D +R ++FNRC E R++ Sbjct: 28 KRRECERGECRGVHDDERTNCVLRCQSQHCYAEVYGAEELEPGEIDTKRQQKFNRCLTTEERQQ 91
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A0G4GQ10_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GQ10_9ALVE) HSP 1 Score: 61.6 bits (148), Expect = 1.900e-10 Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 19 RQRKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRCAMDEM 207 R R+ C N C +P E+D+CV KC+S C+ ++ E LEPGEVD +R +F C E+ Sbjct: 38 RARRNKCVMNECSDIPEEENDDCVDKCLSPQCYQDIFAENPLEPGEVDRKRRNDFMNCVKKEV 100
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A7S0JBQ6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JBQ6_9EUKA) HSP 1 Score: 62.0 bits (149), Expect = 2.010e-10 Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 1 Query: 28 KRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRC 192 K+ C R C + + +NCV KC S C++Q+Y ELEPGEVD +R R+FN C Sbjct: 39 KKECERTTCRGVHEDDQENCVLKCQSPECYEQIYAGNELEPGEVDRDRSRKFNTC 93
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Match: A0A024U4E0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4E0_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 5.070e-10 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 1 Query: 19 RQRKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPGEVDLERMREFNRCAMDEMRKEA 219 R +K+ C C HL + + NCVH+C+S+AC+ +VY E LE GE+D R +F C ++ R A Sbjct: 33 RMQKKGCEMYECSHLNEWTNMNCVHECISAACYAEVYASEPLEDGEIDEYRYHKFLSCIRNDYRARA 99 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100658.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100658.149.1 >prot_M-pyrifera_M_contig100658.149.1 ID=prot_M-pyrifera_M_contig100658.149.1|Name=mRNA_M-pyrifera_M_contig100658.149.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp QLTASLRQRKRTCRRNACGHLPTFEDDNCVHKCVSSACFDQVYGEEELEPback to top mRNA from alignment at M-pyrifera_M_contig100658:118..432+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100658.149.1 ID=mRNA_M-pyrifera_M_contig100658.149.1|Name=mRNA_M-pyrifera_M_contig100658.149.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=315bp|location=Sequence derived from alignment at M-pyrifera_M_contig100658:118..432+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100658:118..432+ >mRNA_M-pyrifera_M_contig100658.149.1 ID=mRNA_M-pyrifera_M_contig100658.149.1|Name=mRNA_M-pyrifera_M_contig100658.149.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig100658:118..432+ (Macrocystis pyrifera P11B4 male)back to top |