mRNA_M-pyrifera_M_contig106905.1477.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A7S4HUZ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HUZ6_9EUKA) HSP 1 Score: 124 bits (312), Expect = 4.490e-34 Identity = 57/96 (59.38%), Postives = 76/96 (79.17%), Query Frame = 1
Query: 7 AAEASQVMYAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQLLL 294
++ A+ V++ +Y SK+WEFLD++ V+L GG++++QFK HHWTTLSV WVS +GN+L TCFVN+FHHI MYL+F GV K ILLFTGT QL+L
Sbjct: 61 SSNAAIVVHLFYYSKMWEFLDLILVSLSGGELSYQFKVHHWTTLSVVWVSMQGNMGNLLITCFVNSFHHIFMYLYFGGVSSAKNILLFTGTAQLVL 156
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A814UDE1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814UDE1_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 1.360e-9 Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 19 SQVMYAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTH---YGLGN----VLATCFVNAFHHIGMYLFFAGVRQT 252
S ++Y Y SKL+E+LDI+FV LM G ++ F+ HH +TL V W+S + + L N ++ T +N FHHI +YL+ + +T
Sbjct: 163 SILLYIYLCSKLYEYLDIIFVVLMRGTISRHFRVHHLSTLIVTWISIYSIEHHLINLSWLIIPTILLNTFHHIILYLYLSLTDKT 247
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A816N0A1_9BILA (Elongation of very long chain fatty acids protein n=6 Tax=Rotaria TaxID=231623 RepID=A0A816N0A1_9BILA) HSP 1 Score: 59.7 bits (143), Expect = 1.630e-8 Identity = 39/87 (44.83%), Postives = 44/87 (50.57%), Query Frame = 1
Query: 31 YAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQLL 291
Y +YLSKLWEFLDI V L V F++HH TT SV V + T N+ H MY FAGV ILL G QLL
Sbjct: 103 YIFYLSKLWEFLDIYLVILNKTPVLMHFRWHHQTTPSVVLVGLLGDVSYEWPTLVCNSLLHTFMYPHFAGVWNVHRILLVLGASQLL 189
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A816QCQ8_9BILA (Elongation of very long chain fatty acids protein n=3 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816QCQ8_9BILA) HSP 1 Score: 59.7 bits (143), Expect = 2.770e-8 Identity = 39/87 (44.83%), Postives = 44/87 (50.57%), Query Frame = 1
Query: 31 YAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQLL 291
Y +YLSKLWEFLDI V L V F++HH TT SV V + T N+ H MY FAGV ILL G QLL
Sbjct: 409 YIFYLSKLWEFLDIYLVILNKTPVLMHFRWHHQTTPSVVLVGLLGDVSYEWPTLVCNSLLHTFMYPHFAGVWNVHRILLVLGASQLL 495
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A0D2AQ02_9PEZI (Uncharacterized protein n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D2AQ02_9PEZI) HSP 1 Score: 57.8 bits (138), Expect = 7.130e-8 Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 31 YAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQL 288
YA +LS+++E+LD++F G F FHH TT + W +N FHH+ M+LFFAGV T+ +L +T +QL
Sbjct: 87 YAVHLSRVFEYLDMLFFVAAGHAPDLHFAFHHLTTPYLTWFRALRDFDGWRLFVGLNTFHHVLMHLFFAGVTSTRALLPWTRYVQL 172
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A812UQ14_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812UQ14_9DINO) HSP 1 Score: 56.6 bits (135), Expect = 1.920e-7 Identity = 28/79 (35.44%), Postives = 39/79 (49.37%), Query Frame = 1
Query: 13 EASQVMYAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQ 249
E + Y+ SK WEFLDI+FV+LMG F HH TT +AW+ Y + N H+ +Y +F G +
Sbjct: 78 EVDMIFGVYFYSKAWEFLDIIFVSLMGIQPNLHFIVHHTTTPCLAWLVWTYRSASGAVFLLANVLMHVFLYAYFGGAKS 156
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A822GWL0_9BILA (Elongation of very long chain fatty acids protein (Fragment) n=7 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A822GWL0_9BILA) HSP 1 Score: 56.2 bits (134), Expect = 2.370e-7 Identity = 36/87 (41.38%), Postives = 42/87 (48.28%), Query Frame = 1
Query: 31 YAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQLL 291
Y +YLSKLWEFLDI V L V F++HH TT SV + T N H MY FAG+ ILL G QL+
Sbjct: 103 YIFYLSKLWEFLDIYLVILNKTPVLMHFRWHHQTTPSVVLAGLIGNISYEWPTIVSNTLLHTFMYPHFAGIWNAYPILLVLGAWQLI 189
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A815CCV7_9BILA (Elongation of very long chain fatty acids protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A815CCV7_9BILA) HSP 1 Score: 54.3 bits (129), Expect = 1.540e-6 Identity = 32/86 (37.21%), Postives = 41/86 (47.67%), Query Frame = 1
Query: 31 YAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQL 288
Y +YLSKLWEF+D+ V L V F++HH TT SV + T N H MY FAG+ +L+ G QL
Sbjct: 103 YIFYLSKLWEFIDVYLVILNKTPVLMHFRWHHQTTPSVVLAGLLGDVSYEYPTIISNTLLHTFMYPHFAGIWNVHRVLVILGAWQL 188
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A821FEA9_9BILA (Elongation of very long chain fatty acids protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A821FEA9_9BILA) HSP 1 Score: 54.3 bits (129), Expect = 1.540e-6 Identity = 35/88 (39.77%), Postives = 43/88 (48.86%), Query Frame = 1
Query: 31 YAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQLLL 294
Y +YLSKLWEF+DI V L V F++HH TT SV + T N+ H MY FA V ILL G QL++
Sbjct: 103 YIFYLSKLWEFIDIYLVILNKTPVLMHFRWHHQTTPSVVLAGLLGDVSYEWPTIVSNSLLHTFMYPHFADVWNVSKILLVLGASQLII 190
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Match: A0A815KLH7_ADIRI (Elongation of very long chain fatty acids protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A815KLH7_ADIRI) HSP 1 Score: 52.0 bits (123), Expect = 7.880e-6 Identity = 33/89 (37.08%), Postives = 42/89 (47.19%), Query Frame = 1
Query: 25 VMYAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNVLATCFVNAFHHIGMYLFFAGVRQTKLILLFTGTLQLL 291
V Y +YLSKLWEF+D+ V L V F++HH TT SV + N H MY FAG+ +L+ G QLL
Sbjct: 62 VWYIFYLSKLWEFMDVYLVILNKTPVLPHFRWHHQTTPSVVLAGLRGDISYEWPILASNTLLHTFMYPHFAGLWNVHKVLVILGAWQLL 150 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106905.1477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106905.1477.1 >prot_M-pyrifera_M_contig106905.1477.1 ID=prot_M-pyrifera_M_contig106905.1477.1|Name=mRNA_M-pyrifera_M_contig106905.1477.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp MYAYYLSKLWEFLDIVFVTLMGGDVAWQFKFHHWTTLSVAWVSTHYGLGNback to top mRNA from alignment at M-pyrifera_M_contig106905:2..295- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106905.1477.1 ID=mRNA_M-pyrifera_M_contig106905.1477.1|Name=mRNA_M-pyrifera_M_contig106905.1477.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig106905:2..295- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106905:2..295- >mRNA_M-pyrifera_M_contig106905.1477.1 ID=mRNA_M-pyrifera_M_contig106905.1477.1|Name=mRNA_M-pyrifera_M_contig106905.1477.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig106905:2..295- (Macrocystis pyrifera P11B4 male)back to top |