mRNA_M-pyrifera_M_contig100560.128.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: L8HA84_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HA84_ACACA) HSP 1 Score: 176 bits (447), Expect = 1.130e-48 Identity = 95/226 (42.04%), Postives = 141/226 (62.39%), Query Frame = 1 Query: 19 VLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPD-VTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHF-----PPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLVAGAGLEKEVKIYPGADEVGLVLLARLSIHLEHATTPTLSTLYLFPNASSLIPSFE 678 +LS EM +YGGLI SR SN + EV R++ +++ + D V SAV+MRIP+YN+ FED WYW +G D++ FSY+ D+ D+ + A YRS++PP ++ DW WRRSRN N T ++ + F LY+T+DD+A++GFN AEA L++LV GLE+++ IYPGADEVGL +LA+ S+ E +P + ++ P +LIP++E Sbjct: 104 ILSSEMYLYGGLIGSRISNWTQAEVEGRLAKLVAYKQQLGDGVKIYASAVIMRIPAYNS---GFEDQWYWAYYGRDLFQFSYFMDKYDTLRQPADLATAQSYRSKVPPAVVEDWLWRRSRNFNVTKAIIEQQFLWKKQHNQRLFEKLYVTQDDNAEYGFNIAEAEKLKALVRQYGLEEDIYIYPGADEVGLTMLAQSSVRKE-GKSPRIKLVFRDPATINLIPNYE 325
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A816SCZ0_9BILA (Hypothetical protein n=5 Tax=Rotaria TaxID=231623 RepID=A0A816SCZ0_9BILA) HSP 1 Score: 147 bits (371), Expect = 8.220e-38 Identity = 86/227 (37.89%), Postives = 135/227 (59.47%), Query Frame = 1 Query: 19 VLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPD-VTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLV--AGAGLEKEVKIYPGADEVGLVLLARLSIHLEH----ATTPTLSTLYLFPNASSLIPSFE 678 ++S E L+YGGLI SR SNTS +E+N R++T++ L F + +S+V+MRIP+YN DFE+P YW +G IY +S+YTD+ +N T +IP IL+++ WRR+RN N T LL + F +++T DD+A++G N AE R L L+ + +V IYPGADEV L +L+++ ++ E ++ PT+S ++ + IP++E Sbjct: 98 LISTEQLIYGGLINSRISNTSYDELNSRLNTLVGLKREFGSKLQIYLSSVIMRIPAYNE---DFEEPDYWATYGRLIYLWSFYTDRYAVLHNPTDEEQVQNLEKQIPTNILNEFIWRRARNYNLTYTLLHDY--MKIYFERIWLTLDDNAEYGLNKAEERKLIELINDPSVNISSKVNIYPGADEVSLAILSQIVVNNEQKQQESSIPTVSVVFRNVTTQNYIPNYE 319
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A814E0G8_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814E0G8_ADIRI) HSP 1 Score: 146 bits (369), Expect = 1.350e-37 Identity = 86/225 (38.22%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 13 AAVLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFP-DVTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLVAGAGLE--KEVKIYPGADEVGLVLLARLSIHLEHATTPTLSTLYLFPNASSLIPSFE 678 A ++S E L+YGGLI SR SNTS +E+N R+ T++ F + +S+V+MRIP+YN DFE+P YW +G IY +S+YTD+ +N A +IP IL ++ WRR+RN N T LL + + F +++T DD+A++G N AE R L L+ L +V IYPGADEV L +L+++ + + PT Y + IP++E Sbjct: 92 ALLISTEQLIYGGLINSRLSNTSFDELNLRLRTLVGFKQEFGVKLKIYLSSVIMRIPAYNE---DFEEPDYWATYGRLIYLWSFYTDRYLVLHNPADEEQAKILEKQIPQDILREFVWRRARNYNLTYTLLNDYTQAYFEH--IWLTLDDNAEYGLNKAEERKLIQLINNPSLNISSKVNIYPGADEVSLAILSQIVVSNKQTAKPTFKVRYRNITTQNYIPNYE 311
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A817CW46_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817CW46_9BILA) HSP 1 Score: 145 bits (365), Expect = 3.500e-37 Identity = 83/225 (36.89%), Postives = 133/225 (59.11%), Query Frame = 1 Query: 19 VLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPD-VTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLV--AGAGLEKEVKIYPGADEVGLVLLARLSIH--LEHATTPTLSTLYLFPNASSLIPSFE 678 ++S E L+YGGLI SR SNTS++E+N R+ T++ F + +S+V+MRIP+YN DFE+P YW +G IY +S+YTD+ +N +IP IL+++ WRR RN N T LL + + F +++T DD+A++G N AE R L L+ + +V IYPGADEV L +L+++ ++ + ++ PT++ +Y + IP++E Sbjct: 98 LISTEQLIYGGLINSRISNTSLDELNSRLDTLVEFKREFGSKLQIYLSSVIMRIPAYNG---DFEEPDYWATYGRLIYLWSFYTDRYAILHNPADEEQVQILEKQIPANILNEFIWRRERNYNLTYTLLHDY--TKIYFERIWLTLDDNAEYGLNKAEERQLIKLINDPSVNISSKVNIYPGADEVSLAILSQIVVNNKQQQSSIPTITVIYRNVTTKNYIPNYE 317
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A814BM17_9BILA (Hypothetical protein n=7 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A814BM17_9BILA) HSP 1 Score: 142 bits (359), Expect = 4.440e-36 Identity = 83/225 (36.89%), Postives = 133/225 (59.11%), Query Frame = 1 Query: 19 VLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPD-VTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLV--AGAGLEKEVKIYPGADEVGLVLLARLSIH--LEHATTPTLSTLYLFPNASSLIPSFE 678 ++S E L+YGGLI SR SNTS++E+N R++ ++ F + +S+V+MRIP+YN DFE+P YW +G IY +S+YTD+ +N +IP IL+++ WRR+RN N T LL + + F +++T DD+A++G N AE R L L+ + +V IYPGADEV L +L++L ++ + ++ PT++ Y + IP++E Sbjct: 98 LISTEQLIYGGLINSRISNTSLDELNSRLTILVGFKREFGSKLQIYLSSVIMRIPAYNG---DFEEPNYWATYGRLIYLWSFYTDRYAVLHNPADEEQVQILEKQIPSNILNEFIWRRARNYNLTYTLLHDY--TKLYFERIWLTLDDNAEYGLNKAEERQLIKLINDPSVNISSKVNIYPGADEVSLAILSQLVVNNKQQQSSIPTITVRYRNVTTKNYIPNYE 317
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A818JL36_9BILA (Hypothetical protein n=6 Tax=Rotaria sordida TaxID=392033 RepID=A0A818JL36_9BILA) HSP 1 Score: 139 bits (350), Expect = 8.360e-35 Identity = 84/227 (37.00%), Postives = 132/227 (58.15%), Query Frame = 1 Query: 19 VLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPD-VTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLVAGAGLE--KEVKIYPGADEVGLVLLARLSIHLEH----ATTPTLSTLYLFPNASSLIPSFE 678 ++S E L+YGGLI SR SNTS++E+N R++ ++ F + +S+V+MRIP+YN DFE+P YW +G IY +S+YTD+ +N +IP IL ++ WRR+RN N T LL + + F +++T DD+A +G N AE R L L+ L +V IYPGADEV L +L+++ ++ + ++ PT++ LY + IP++E Sbjct: 98 LISTEQLIYGGLINSRISNTSLDELNSRLNKLVEFKREFGSKLQIYLSSVIMRIPAYNE---DFEEPEYWAIYGRLIYLWSFYTDRYAVLHNPADEEQVHILEKQIPSNILDEFIWRRARNYNLTYTLLHDY--TKVYFERIWLTLDDNAVYGLNKAEERQLIKLINDPSLNISSKVNIYPGADEVNLAILSQIVVNNKXXXXXSSIPTITVLYRNITTKNYIPNYE 319
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A813TC84_9BILA (Hypothetical protein n=9 Tax=Adineta steineri TaxID=433720 RepID=A0A813TC84_9BILA) HSP 1 Score: 136 bits (343), Expect = 1.440e-33 Identity = 84/229 (36.68%), Postives = 128/229 (55.90%), Query Frame = 1 Query: 19 VLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPD-VTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLV--AGAGLEKEVKIYPGADEVGLVLLARLSIHLEHA------TTPTLSTLYLFPNASSLIPSFE 678 +LS E L+YGGLI SR SNTS +E+N R+ ++ L F + +S+V+MRIP+YN DFE+P YW +G IY +S+YTD+ +N +IP IL ++ WRR+RN N T LL + + F +++T DD+A++G N AE R L L+ + +V IYPGADEV L +L+++ ++ + PT + Y + IP++E Sbjct: 98 LLSTEQLLYGGLINSRLSNTSFDELNSRLKNLVGLKREFGSKLQIYLSSVIMRIPAYNG---DFEEPDYWATYGRLIYLWSFYTDRYAVLHNPADEEQVHILEKQIPSNILQEFIWRRARNYNLTYTLLHDY--TRLYFERIWLTLDDNAEYGLNKAEERKLIQLIHDPSINISSKVNIYPGADEVSLAILSQIVVNXXXXXXXXXXSIPTFTVRYRNVTTQNYIPNYE 321
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A814VIZ5_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A814VIZ5_9BILA) HSP 1 Score: 136 bits (343), Expect = 2.210e-33 Identity = 83/226 (36.73%), Postives = 132/226 (58.41%), Query Frame = 1 Query: 19 VLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPD-VTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLVAGAGLE--KEVKIYPGADEVGLVLLARLSIH---LEHATTPTLSTLYLFPNASSLIPSFE 678 ++S E L+YGGLI SR SNTS++E+N R++ ++ F + +S+V+MRIP+YN DFE+P YW +G IY +S+YTD+ +N +IP IL ++ RR+RN N T LL + + F +++T DD+A++G N AE R L L+ L +V IYPGADEV L +L+++ ++ + ++ PT++ LY + IP++E Sbjct: 286 LISTEQLIYGGLINSRISNTSLDELNSRLNKLVEFKREFGSKLQIYLSSVIMRIPAYNE---DFEEPEYWAIYGRLIYLWSFYTDRYAVLHNPADEEQVHILEKQIPSNILDEFIRRRARNYNLTYTLLHDY--TKVYFERIWLTLDDNAEYGLNKAEERQLIKLINDPSLNISSKVNIYPGADEVNLAILSQIVVNNKQQQQSSIPTITVLYRNITTKNYIPNYE 506
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: A0A0J1DPT6_9FIRM (Uncharacterized protein n=2 Tax=Firmicutes TaxID=1239 RepID=A0A0J1DPT6_9FIRM) HSP 1 Score: 124 bits (312), Expect = 1.580e-29 Identity = 74/195 (37.95%), Postives = 109/195 (55.90%), Query Frame = 1 Query: 4 EVDAAVLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPDVTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLVAGAGLEKEVKIYPGADEVGLVLLAR 588 E+D V+S E VYGGLIPSR S+ S+EE R+ + + + P++T VVMRI + N E+P YW E+G I+++S + D A RS+IP +L D+ RRSRN+ + + + + L +T+DD++++GF E LR ++ GLE V IYPGADEVG+VL+AR Sbjct: 60 ELDGLVVSLETFVYGGLIPSRISHDSLEECLHRLEALRRIKQKHPELTIYAFNVVMRISNSNINE---EEPLYWSEYGKLIWAYSRLAYRVDFLGMAEEGQERDAVRSQIPGHVLEDYLARRSRNHQVNLAAIDLAADGTIDY--LLLTQDDTSEFGFPNQEQHALREKISALGLEDRVLIYPGADEVGMVLIAR 249
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Match: UPI001AE3CF55 (DUF4127 family protein n=1 Tax=Symbiobacterium terraclitae TaxID=557451 RepID=UPI001AE3CF55) HSP 1 Score: 124 bits (310), Expect = 2.510e-29 Identity = 71/210 (33.81%), Postives = 115/210 (54.76%), Query Frame = 1 Query: 10 DAAVLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPDVTFLISAVVMRIPSYNTPPTDFEDPWYWDEFGFDIYSFSYYTDQADSTNNATARSLASEYRSRIPPPILSDWEWRRSRNNNATIRLLTHFPPSSFPFFSLYITEDDSAKWGFNAAEARHLRSLVAGAGLEKEVKIYPGADEVGLVLLARLSIHLEHATTPTLSTLY 639 DA V+S ++L YGGL PSR + +V R++ + L + PD+ + MRIP+YN+ D E+P YW +G+D++ SY D+ T + AR+ A +R+P +++++ RR+RN + L + +DD++++G+N AE R LR+ + GL + IYPGADEVGL L+AR +++ TP Y Sbjct: 61 DAVVVSLDLLGYGGLCPSRFGGVTAAQVKERLAPVFRLKAERPDLPVYAFSATMRIPAYNS---DAEEPEYWATYGYDLWRLSYCDDKYQVTGDEAARAEAEAAAARVPAELVAEFRARRARNFAVNLHALDMAEQGLLDL--IVFPQDDTSEFGWNIAEQRQLRAEINRRGLGMKALIYPGADEVGLALVAR-AVNRAAGVTPKFYPFY 264 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100560.128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100560.128.1 >prot_M-pyrifera_M_contig100560.128.1 ID=prot_M-pyrifera_M_contig100560.128.1|Name=mRNA_M-pyrifera_M_contig100560.128.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp AEVDAAVLSFEMLVYGGLIPSRTSNTSMEEVNRRVSTILSLPSRFPDVTFback to top mRNA from alignment at M-pyrifera_M_contig100560:2..679+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100560.128.1 ID=mRNA_M-pyrifera_M_contig100560.128.1|Name=mRNA_M-pyrifera_M_contig100560.128.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig100560:2..679+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100560:2..679+ >mRNA_M-pyrifera_M_contig100560.128.1 ID=mRNA_M-pyrifera_M_contig100560.128.1|Name=mRNA_M-pyrifera_M_contig100560.128.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig100560:2..679+ (Macrocystis pyrifera P11B4 male)back to top |