mRNA_M-pyrifera_M_contig10596.1280.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A6H5K442_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K442_9PHAE) HSP 1 Score: 227 bits (578), Expect = 4.480e-69 Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 2
Query: 8 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEVLPPPGQKKMPKDEFVALMEERVKQEYEQLDNYHSSQ 400
GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKA G+ TGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPAS+AFGEEVLPPPG+ + + EFVA+MEERV+ EY +LD++H S+
Sbjct: 184 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAMGRNKTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASVAFGEEVLPPPGET-LKQAEFVAIMEERVQAEYAKLDDFHESK 313
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A836CPR4_9STRA (Glycerol-3-phosphate acyltransferase,chloroplastic (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR4_9STRA) HSP 1 Score: 140 bits (354), Expect = 8.810e-36 Identity = 77/130 (59.23%), Postives = 89/130 (68.46%), Query Frame = 2
Query: 11 GQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEVLPPPGQKKMPKDEFVALMEERVKQEYEQLDNYHSSQ 400
GQ IWVAPSGGRDRPDP TG FVV+P+DPKSV VFRLMAAK + T HFFPFAMWTNKL+PPPD V K+LGERR A+RGP SIA EV + + +F A +E VK Y +LD +Q
Sbjct: 191 GQIIWVAPSGGRDRPDPATGDFVVAPFDPKSVGVFRLMAAKTRKVCKT----HFFPFAMWTNKLMPPPDTVQKDLGERRVAERGPVSIAVCNEV----DGEGLDMQQFAAAVEASVKAGYAKLDAQQKAQ 312
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A7S2XHE1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XHE1_9EUKA) HSP 1 Score: 120 bits (301), Expect = 2.930e-29 Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 2
Query: 8 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEV 292
GG F+WVAPSGGRDRPDP T +FVV+P+D +SV++FRLMA KA +G THFFP AM T++LVPPPD + +GE+R A RG A+I FG+EV
Sbjct: 59 GGTFLWVAPSGGRDRPDPNTKEFVVAPFDERSVQMFRLMAQKAN--MASGKKTHFFPMAMLTHELVPPPDGIKATVGEKRSAKRGAANIWFGDEV 151
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A7S4DHE5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DHE5_9EUKA) HSP 1 Score: 124 bits (311), Expect = 1.020e-28 Identity = 60/95 (63.16%), Postives = 75/95 (78.95%), Query Frame = 2
Query: 8 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEV 292
GG F+WVAPSGGRDRPDPET +FVV+P+D +SV++FRLMA KAK +G THFFP AM T++LVPPPD + +GE+R A RG A+I FG+EV
Sbjct: 284 GGTFLWVAPSGGRDRPDPETREFVVAPFDDRSVQMFRLMAQKAK--MASGKKTHFFPMAMLTHELVPPPDGIKAAVGEKRSAKRGAANIWFGDEV 376
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A6U1N7P7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N7P7_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.720e-27 Identity = 66/134 (49.25%), Postives = 87/134 (64.93%), Query Frame = 2
Query: 2 GVGGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMA---AKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEVLPPPGQKKMPKDEFVAL-MEERVKQEYEQLDNYH 391
G G +WVAPSGGRDRPDPE+GKFVV+P DPKSV++F LMA AK K+ THF+P AM+T L+PPPD+V LGE R A RG SI FG E+ + P + ++ +E+ +K EY +L ++H
Sbjct: 234 GDGSTLLWVAPSGGRDRPDPESGKFVVAPLDPKSVQIFNLMAINAAKTHDKK-----THFYPLAMFTQALLPPPDKVQSSLGEPRIAKRGGVSIGFGPEI----DASQFPNRQALSTAVEDAIKVEYAKLQDFH 358
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A812V4D3_9DINO (ATS1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V4D3_9DINO) HSP 1 Score: 116 bits (290), Expect = 3.100e-27 Identity = 61/127 (48.03%), Postives = 82/127 (64.57%), Query Frame = 2
Query: 8 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEVLPPPGQKKMPKDEFVALMEERVKQEYEQLDNY 388
GG WVAPSGGRDR PETG+F + +D SV +F L+A KA G GP THFFP AMWT++LVPPP+ +GE R A R P ++FGE + P +K+ + +F A +E+RV Y+ LD++
Sbjct: 114 GGHIFWVAPSGGRDRRRPETGRFGPAEFDQASVGLFSLLAQKAA--RGGGPTTHFFPLAMWTHRLVPPPEDAKAGVGEARSAARAPVGLSFGEAMDP---KKEGGRKKFPAAVEKRVNDLYDSLDSH 235
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A813KPJ0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KPJ0_POLGL) HSP 1 Score: 121 bits (304), Expect = 3.270e-27 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 2
Query: 8 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEVLP 298
GG WVAPSGGRDR PETG+F+ + +DP+SV +F+L+A KA K G G THFFP AMWTN+LVPPPD +GE R A R P ++AFG E++P
Sbjct: 438 GGHMFWVAPSGGRDRKSPETGRFIPAKFDPQSVGLFQLLAQKAAAK-GKGAKTHFFPLAMWTNQLVPPPDDTKAGVGEERSAARAPVALAFGPEMVP 533
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A7S0CQ91_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CQ91_9EUKA) HSP 1 Score: 119 bits (298), Expect = 9.240e-27 Identity = 58/95 (61.05%), Postives = 72/95 (75.79%), Query Frame = 2
Query: 8 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEV 292
G F+WVAPSGGRDRPDPE+ +FVV+P+D +SV++F+LMA KA G THFFP AM T++LVPPPD V ++GE+R A RG A I FGEEV
Sbjct: 309 GSAFLWVAPSGGRDRPDPESREFVVAPFDERSVQMFKLMANKANRNSGKD--THFFPMAMLTHELVPPPDGVQAQVGEKRSAKRGAAMIWFGEEV 401
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A7S3WZ68_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WZ68_9SPIT) HSP 1 Score: 113 bits (283), Expect = 8.160e-25 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 2
Query: 2 GVGGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEV 292
G GG+ IWVAPSGGRDRPDP TGK+ V+P+D KS+E+FRLMAAKA+ THF+P +M+T + PPP V E+GE R PA++ FGEEV
Sbjct: 277 GEGGKLIWVAPSGGRDRPDPSTGKYTVAPFDSKSIEMFRLMAAKAEK------TTHFYPLSMFTYPICPPPKAVGGEIGETRTVKFYPAALHFGEEV 367
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Match: A0A7S2MEE6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MEE6_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.670e-24 Identity = 69/143 (48.25%), Postives = 85/143 (59.44%), Query Frame = 2
Query: 8 GGQFIWVAPSGGRDRPDPETGKFVVSPYDPKSVEVFRLMAAKAKGKEGT-----GPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASIAFGEEVLPPPGQKKMPKDE--------FVALMEERVKQEYEQLDNYHSS 397
GG IW+A SGGRDRP+ ET +F VSP+D K+VE+FRLMA KA T PVT F P AM+T++LVPPPD+VN LGE R A RG SI F EV + + K E + A M+ VK+ YE+L SS
Sbjct: 286 GGNCIWLAASGGRDRPNQETKQFEVSPFDAKAVELFRLMAKKANMMAATKKGDKAPVTRFMPLAMFTHQLVPPPDEVNSALGETRTAKRGSVSIGFVPEVSDEALAEAVSKAETKEGKRAAYTACMQSGVKEMYEELVRLSSS 428 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10596.1280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10596.1280.1 >prot_M-pyrifera_M_contig10596.1280.1 ID=prot_M-pyrifera_M_contig10596.1280.1|Name=mRNA_M-pyrifera_M_contig10596.1280.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp MAAKAKGKEGTGPVTHFFPFAMWTNKLVPPPDQVNKELGERRQADRGPASback to top mRNA from alignment at M-pyrifera_M_contig10596:6527..9127+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10596.1280.1 ID=mRNA_M-pyrifera_M_contig10596.1280.1|Name=mRNA_M-pyrifera_M_contig10596.1280.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2601bp|location=Sequence derived from alignment at M-pyrifera_M_contig10596:6527..9127+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10596:6527..9127+ >mRNA_M-pyrifera_M_contig10596.1280.1 ID=mRNA_M-pyrifera_M_contig10596.1280.1|Name=mRNA_M-pyrifera_M_contig10596.1280.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig10596:6527..9127+ (Macrocystis pyrifera P11B4 male)back to top |