Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 403 |
Cds size | 402 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815502.1338058-CDS-M-pyrifera_M_contig10054:2126..2528 | 1622815502.1338058-CDS-M-pyrifera_M_contig10054:2126..2528 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10054 2127..2528 + |
1692277440.3787205-CDS-M-pyrifera_M_contig10054:2126..2528 | 1692277440.3787205-CDS-M-pyrifera_M_contig10054:2126..2528 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10054 2127..2528 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10054.121.1 >prot_M-pyrifera_M_contig10054.121.1 ID=prot_M-pyrifera_M_contig10054.121.1|Name=mRNA_M-pyrifera_M_contig10054.121.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
HTTHTRQPNEPRGGPLEICRHIDTPHNHGIVSTTIINHQYHRPRVTNKNK GTTNQKKKKRKKAACLPITVHCCSVWICTATAAASHIKKTRQAKPRTTGY QSSTFHFLHMGLAQHLTFFFALGASNVCLVRWKP back to topmRNA from alignment at M-pyrifera_M_contig10054:2127..2529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig10054.121.1 ID=mRNA_M-pyrifera_M_contig10054.121.1|Name=mRNA_M-pyrifera_M_contig10054.121.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=403bp|location=Sequence derived from alignment at M-pyrifera_M_contig10054:2127..2529+ (Macrocystis pyrifera P11B4 male) CACACCACGCACACGCGTCAGCCGAATGAACCCCGGGGCGGGCCCCTTGA
AATTTGTCGACACATCGACACGCCCCACAACCACGGCATAGTATCGACCA
CCATAATCAACCATCAATACCACCGGCCAAGAGTAACCAATAAAAATAAA
GGCACAACAAACCAAAAAAAGAAAAAAAGAAAAAAAGCAGCATGCTTGCC
AATCACCGTTCATTGTTGCTCTGTATGGATATGTACAGCTACTGCTGCTG
CATCGCATATTAAGAAAACGAGACAAGCCAAGCCAAGGACAACAGGCTAT
CAATCGTCAACTTTCCACTTCCTCCACATGGGACTCGCCCAACACCTCAC
GTTTTTCTTCGCGCTTGGTGCAAGCAATGTTTGCCTGGTCAGGTGGAAAC
CCG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig10054:2127..2529+ >mRNA_M-pyrifera_M_contig10054.121.1 ID=mRNA_M-pyrifera_M_contig10054.121.1|Name=mRNA_M-pyrifera_M_contig10054.121.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig10054:2127..2529+ (Macrocystis pyrifera P11B4 male) CACACCACGCACACGCGTCAGCCGAATGAACCCCGGGGCGGGCCCCTTGA AATTTGTCGACACATCGACACGCCCCACAACCACGGCATAGTATCGACCA CCATAATCAACCATCAATACCACCGGCCAAGAGTAACCAATAAAAATAAA GGCACAACAAACCAAAAAAAGAAAAAAAGAAAAAAAGCAGCATGCTTGCC AATCACCGTTCATTGTTGCTCTGTATGGATATGTACAGCTACTGCTGCTG CATCGCATATTAAGAAAACGAGACAAGCCAAGCCAAGGACAACAGGCTAT CAATCGTCAACTTTCCACTTCCTCCACATGGGACTCGCCCAACACCTCAC GTTTTTCTTCGCGCTTGGTGCAAGCAATGTTTGCCTGGTCAGGTGGAAAC CCCACACCACGCACACGCGTCAGCCGAATGAACCCCGGGGCGGGCCCCTT GAAATTTGTCGACACATCGACACGCCCCACAACCACGGCATAGTATCGAC CACCATAATCAACCATCAATACCACCGGCCAAGAGTAACCAATAAAAATA AAGGCACAACAAACCAAAAAAAGAAAAAAAGAAAAAAAGCAGCATGCTTG CCAATCACCGTTCATTGTTGCTCTGTATGGATATGTACAGCTACTGCTGC TGCATCGCATATTAAGAAAACGAGACAAGCCAAGCCAAGGACAACAGGCT ATCAATCGTCAACTTTCCACTTCCTCCACATGGGACTCGCCCAACACCTC ACGTTTTTCTTCGCGCTTGGTGCAAGCAATGTTTGCCTGGTCAGGTGGAA ACCC back to top
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