prot_M-pyrifera_M_contig100533.118.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100533.118.1
Unique Nameprot_M-pyrifera_M_contig100533.118.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
BLAST of mRNA_M-pyrifera_M_contig100533.118.1 vs. uniprot
Match: A0A7S0R613_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R613_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 7.400e-6
Identity = 39/123 (31.71%), Postives = 57/123 (46.34%), Query Frame = 0
Query:   24 SLTLSYSPPTITSINPTKLLPGEESIDIEVCGENFAPRADD-LDGIWIGGIACASVGVSVENQCAQCFGLKTPGA--PERIIVGGRAATSNILTYVPPPTIISIAPNPAGPGSLLTINGEGFG 143
            S+T +Y+ P +  + P+    G E   + + G+NF P     L+ + IGG+AC +  V+VEN   QC      G   P  I V G+A+         PP +  I P  A  G  + I G  FG
Sbjct: 1669 SVTFNYAKPLVLEVTPS----GTEGGMVTIVGDNFGPAGSPFLESVRIGGVACTTPNVTVENTEIQCLLQAGSGRDLPVIITVNGQASDPWPHYQYLPPVVQQIRPGSAFAGDDVEIEGLSFG 1787          
BLAST of mRNA_M-pyrifera_M_contig100533.118.1 vs. uniprot
Match: UPI001F53D6C9 (FG-GAP-like repeat-containing protein n=1 Tax=Hymenobacter sp. DH14 TaxID=2926463 RepID=UPI001F53D6C9)

HSP 1 Score: 54.3 bits (129), Expect = 9.840e-6
Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = 0
Query:   31 PPTITSINPTKLLPGEESIDIEVCGENFAPRADDLDGIWIGGIACASVGVSVENQCAQCFGLKTPGAPERIIV---GGRAATSNILTYVPPPTIISIAPNPAGPGSLLTINGEGF 142
            PPTI+S +P     G     + V G NF        G+ + G A +  G SV +  +  F +    +   I V   GG A +S   T++PPPTI S+AP  A  G+ +T+ G GF
Sbjct:  611 PPTISSFSPAS---GPVGQTVTVTGTNFTGAT----GLTLNGAAVS--GFSVVSGTSLTFVVPAGASSGPIAVTTPGGTATSSTSFTFLPPPTITSVAPASANTGTSITVTGTGF 716          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100533.118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S0R613_9CHLO7.400e-631.71Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
UPI001F53D6C99.840e-633.91FG-GAP-like repeat-containing protein n=1 Tax=Hyme... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 25..116
e-value: 5.1E-6
score: 28.6
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 29..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100533contigM-pyrifera_M_contig100533:160..621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100533.118.1mRNA_M-pyrifera_M_contig100533.118.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100533 160..621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100533.118.1 ID=prot_M-pyrifera_M_contig100533.118.1|Name=mRNA_M-pyrifera_M_contig100533.118.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
TLPSGVGTSIPVRFLTATNLSSNSLTLSYSPPTITSINPTKLLPGEESID
IEVCGENFAPRADDLDGIWIGGIACASVGVSVENQCAQCFGLKTPGAPER
IIVGGRAATSNILTYVPPPTIISIAPNPAGPGSLLTINGEGFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR014756Ig_E-set