prot_M-pyrifera_M_contig100517.109.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100517.109.1
Unique Nameprot_M-pyrifera_M_contig100517.109.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length102
Homology
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: A0A1Z5L9I2_ORNMO (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L9I2_ORNMO)

HSP 1 Score: 143 bits (361), Expect = 7.520e-41
Identity = 65/102 (63.73%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL C+++I+ +P G+PV ERA+P+AIF AEP+++RHYL++WLK S G+D   IR+I+DW+YY +RLG+ IQKIITIPAALQ VPNPV RV HPSWL K+L E
Sbjct:  134 GLSCRYVISRKPEGSPVTERAIPLAIFQAEPSVKRHYLRRWLKAS-GMDNFDIREILDWDYYVERLGSAIQKIITIPAALQQVPNPVPRVAHPSWLHKRLLE 234          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: A0A8D8B390_CULPI (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8B390_CULPI)

HSP 1 Score: 146 bits (368), Expect = 1.090e-40
Identity = 68/102 (66.67%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL CKFII+ +P GAPV ERA+P+AIF +EP++RRHYL++WLK++T  D D IRD++DW+YY +RLG TIQKIITIPAALQG+ NPV RV HP WL KK+ E
Sbjct:  166 GLACKFIISRKPDGAPVTERAIPLAIFQSEPSVRRHYLRRWLKDNTMGDAD-IRDVLDWQYYIERLGGTIQKIITIPAALQGLNNPVPRVQHPDWLHKKMLE 266          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: A0A1B6K030_9HEMI (DNA polymerase epsilon catalytic subunit (Fragment) n=4 Tax=Homalodisca TaxID=139475 RepID=A0A1B6K030_9HEMI)

HSP 1 Score: 139 bits (351), Expect = 1.530e-40
Identity = 64/102 (62.75%), Postives = 83/102 (81.37%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL CKFII+ +P GAPV ERA+P+AIF AEP++++HYL+KWLK+++  D+D IR ++DW YY +RLG  IQKIITIPAA+QG+ NPV RV HP WL KK+ E
Sbjct:   18 GLACKFIISRKPDGAPVTERAIPLAIFQAEPSVKKHYLRKWLKDNSINDVD-IRQVLDWNYYIERLGGAIQKIITIPAAMQGLSNPVPRVHHPDWLHKKMLE 118          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: V9IM32_APICE (DNA polymerase epsilon catalytic subunit n=1 Tax=Apis cerana TaxID=7461 RepID=V9IM32_APICE)

HSP 1 Score: 140 bits (354), Expect = 2.660e-40
Identity = 65/102 (63.73%), Postives = 84/102 (82.35%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL CK+IIAN+P GAPV ERA+P+AIF +EPAIR++YL+KWLK+ + +  D IR+I+DW YY +RLG+ IQKIITIPAA+QG+ NPV RV HP WL K++ E
Sbjct:    6 GLACKYIIANKPQGAPVTERAIPLAIFQSEPAIRKYYLRKWLKDPS-LQNDDIRNILDWSYYIERLGSAIQKIITIPAAMQGLSNPVPRVKHPDWLHKRVME 106          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: UPI00065B8C60 (DNA polymerase epsilon catalytic subunit A n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B8C60)

HSP 1 Score: 144 bits (364), Expect = 2.770e-40
Identity = 68/102 (66.67%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL C+F+I+ +P G+PV ERA+P+AIF AEP +RRHYLKKWLK S    LD IRDI+DWEYY +RLG  IQKIITIPAALQ V NPV R+ HP WL KK+ E
Sbjct:   60 GLSCRFVISKKPEGSPVTERAIPLAIFQAEPTVRRHYLKKWLKLSDASHLD-IRDILDWEYYVERLGGCIQKIITIPAALQAVSNPVPRIPHPDWLRKKMLE 160          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: UPI0006239D1A (LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI0006239D1A)

HSP 1 Score: 149 bits (377), Expect = 8.610e-40
Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL C++IIAN+P  APV ERA+P+AIF +EPA+RRHYLKKWLK+ T +  D IRDI+DW YY +RLG+ IQKIITIPAA+QG+PNPV RV HP WL KK++E
Sbjct: 1066 GLACRYIIANKPQSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPT-LYSDDIRDILDWNYYIERLGSAIQKIITIPAAMQGLPNPVPRVQHPPWLLKKVSE 1166          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: A0A553PC44_TIGCA (DNA polymerase epsilon catalytic subunit n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PC44_TIGCA)

HSP 1 Score: 149 bits (377), Expect = 8.610e-40
Identity = 67/102 (65.69%), Postives = 84/102 (82.35%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL C+FII+ +P GAPV ERA+P+AIF +EP++RRHYL+KWLK++T  D D IR ++DW YY +RLG TIQKIITIPAALQG+PNPV R+ HP WL KK+ E
Sbjct: 1072 GLSCRFIISKKPEGAPVTERAIPLAIFESEPSVRRHYLRKWLKDNTMTDFD-IRKVLDWGYYVERLGGTIQKIITIPAALQGIPNPVPRIAHPDWLHKKIME 1172          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: UPI001ED8739E (DNA polymerase epsilon catalytic subunit 1 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8739E)

HSP 1 Score: 149 bits (377), Expect = 8.610e-40
Identity = 67/102 (65.69%), Postives = 87/102 (85.29%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL CKFII+ +P GAPV ERA+P+AIF +EP+++RHYL+KWLK+ST  D+D IRD++DW+YY +RLG T+QKIITIPAA+QG+PNPV R+ HP WL KK+ E
Sbjct: 1067 GLACKFIISRKPDGAPVTERAIPLAIFQSEPSVKRHYLRKWLKDSTIDDVD-IRDVLDWDYYIERLGGTVQKIITIPAAMQGLPNPVPRIRHPDWLHKKMVE 1167          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: A0A4S2KFY2_9HYME (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Temnothorax longispinosus TaxID=300112 RepID=A0A4S2KFY2_9HYME)

HSP 1 Score: 149 bits (376), Expect = 1.180e-39
Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL C++IIAN+P  APV ERA+P+AIF +EPA+RRHYLKKWLK+ T +  D IRDI+DW YY +RLG+ IQKIITIPAA+QG+PNPV RV HP WL KK++E
Sbjct: 1065 GLACRYIIANKPQSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPT-LYSDDIRDILDWNYYIERLGSAIQKIITIPAAMQGLPNPVPRVQHPPWLHKKVSE 1165          
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Match: A0A182GFR7_AEDAL (DNA polymerase epsilon catalytic subunit n=3 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GFR7_AEDAL)

HSP 1 Score: 148 bits (374), Expect = 2.180e-39
Identity = 70/102 (68.63%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDLDSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKLNE 102
            GL CKF+I+ +P GAPV ERA+P+AIF +EP+IRRHYL+KWLK+ST  D D IRD++DW+YY +RLG TIQKIITIPAALQG+ NPV RV HP WL KK+ E
Sbjct: 1049 GLACKFVISKKPDGAPVTERAIPLAIFQSEPSIRRHYLRKWLKDSTMGDAD-IRDVLDWQYYIERLGGTIQKIITIPAALQGLNNPVPRVQHPEWLHKKMLE 1149          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100517.109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z5L9I2_ORNMO7.520e-4163.73DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A8D8B390_CULPI1.090e-4066.67DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A1B6K030_9HEMI1.530e-4062.75DNA polymerase epsilon catalytic subunit (Fragment... [more]
V9IM32_APICE2.660e-4063.73DNA polymerase epsilon catalytic subunit n=1 Tax=A... [more]
UPI00065B8C602.770e-4066.67DNA polymerase epsilon catalytic subunit A n=1 Tax... [more]
UPI0006239D1A8.610e-4067.65LOW QUALITY PROTEIN: DNA polymerase epsilon cataly... [more]
A0A553PC44_TIGCA8.610e-4065.69DNA polymerase epsilon catalytic subunit n=1 Tax=T... [more]
UPI001ED8739E8.610e-4065.69DNA polymerase epsilon catalytic subunit 1 n=1 Tax... [more]
A0A4S2KFY2_9HYME1.180e-3967.65Eukaryotic translation initiation factor 3 subunit... [more]
A0A182GFR7_AEDAL2.180e-3968.63DNA polymerase epsilon catalytic subunit n=3 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100517contigM-pyrifera_M_contig100517:273..578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100517.109.1mRNA_M-pyrifera_M_contig100517.109.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100517 273..578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100517.109.1 ID=prot_M-pyrifera_M_contig100517.109.1|Name=mRNA_M-pyrifera_M_contig100517.109.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
GLQCKFIIANRPAGAPVVERALPVAIFSAEPAIRRHYLKKWLKNSTGIDL
DSIRDIIDWEYYKKRLGATIQKIITIPAALQGVPNPVARVVHPSWLTKKL
NE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029703POL2