prot_M-pyrifera_M_contig105025.1082.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105025.1082.1
Unique Nameprot_M-pyrifera_M_contig105025.1082.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length128
Homology
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BLAST of mRNA_M-pyrifera_M_contig105025.1082.1 vs. uniprot
Match: A0A6H5JPB8_9PHAE (CCHC-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB8_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.010e-7
Identity = 30/111 (27.03%), Postives = 57/111 (51.35%), Query Frame = 0 
Query:    1 RQAWDALLAWYDPQTTGAKSDLSRRLNSFKMAPGSNPLEEMGRIQDLAAEMRTAGMSVDDHMLYTIFIDALPVEYEVEARNLASRDSIGRDDIIKAVREQHHRLSGNRKKR 111
            +QA D L   ++P++  A  +L  +  +F M    NP E +  ++ LA+ +   G+ V+   + ++F+ ALP EY+     L S  ++ R ++I+ V  QH  +   +  R
Sbjct:  231 KQALDELDKVHNPESQVATQELLSKFQNFAMPADKNPTESLIAMEQLASRLNERGVRVEASYVLSLFLSALPAEYDHAKLTLQSAPTLDRGEVIRVVGSQHSSIKQGKSHR 341
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105025.1082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPB8_9PHAE1.010e-727.03CCHC-type domain-containing protein n=7 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 2..105
e-value: 1.3E-11
score: 44.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105025contigM-pyrifera_M_contig105025:94..477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105025.1082.1mRNA_M-pyrifera_M_contig105025.1082.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105025 94..477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105025.1082.1 ID=prot_M-pyrifera_M_contig105025.1082.1|Name=mRNA_M-pyrifera_M_contig105025.1082.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp
RQAWDALLAWYDPQTTGAKSDLSRRLNSFKMAPGSNPLEEMGRIQDLAAE
MRTAGMSVDDHMLYTIFIDALPVEYEVEARNLASRDSIGRDDIIKAVREQ
HHRLSGNRKKRLQRGRWWLGRGCWWQW*
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