prot_M-pyrifera_M_contig104928.1054.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104928.1054.1
Unique Nameprot_M-pyrifera_M_contig104928.1054.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length63
Homology
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BLAST of mRNA_M-pyrifera_M_contig104928.1054.1 vs. uniprot
Match: A0A3M0XV22_9PROT (Phenylacetate--CoA ligase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XV22_9PROT)

HSP 1 Score: 49.7 bits (117), Expect = 2.420e-5
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0 
Query:    9 SAVKGIAWPAIPPPAQAAIFALCAQLDVSQWWPADKIAAMQLAQADTLLQHA 60
            S + GIAWPAIP    A + A+  QL+ SQWW  D +AA QL Q   LL HA
Sbjct:   17 SRMPGIAWPAIPDGRAATLLAIQFQLEQSQWWSPDDLAAWQLRQLRLLLAHA 68
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104928.1054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3M0XV22_9PROT2.420e-551.92Phenylacetate--CoA ligase family protein n=1 Tax=A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104928contigM-pyrifera_M_contig104928:451..639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104928.1054.1mRNA_M-pyrifera_M_contig104928.1054.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104928 451..639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104928.1054.1 ID=prot_M-pyrifera_M_contig104928.1054.1|Name=mRNA_M-pyrifera_M_contig104928.1054.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp
MLPAAEFPSAVKGIAWPAIPPPAQAAIFALCAQLDVSQWWPADKIAAMQL
AQADTLLQHAFAT
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