mRNA_M-pyrifera_M_contig100500.103.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Match: I2JIF5_9GAMM (Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 TaxID=1168065 RepID=I2JIF5_9GAMM) HSP 1 Score: 249 bits (636), Expect = 1.190e-82 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 Query: 1 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKYRKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAAA 381 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKYRKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAAA Sbjct: 22 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKYRKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAAA 148
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Match: A0A5P9NHU9_9GAMM (Glutathione S-transferase family protein n=1 Tax=Halioglobus maricola TaxID=2601894 RepID=A0A5P9NHU9_9GAMM) HSP 1 Score: 120 bits (302), Expect = 2.480e-30 Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 1 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKYRKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAA 378 L D G +LG + P+++ P +RYCLK+QP V+ K+ KHP+P+R G + R +P+P ++ KS+ + + L NIE L G +Y+ G F+Q D+MM AHFHRLE+VALG +L + LPNI+A Sbjct: 116 LRDDGEFGTTLGMAIPMVSSPAIRYCLKRQPFWHVMRKFSKHPLPSRGIGFRVLRIMPVPRGITDKSVAAIAQALVNIENELSGGDDYILGSFTQVDVMMMAHFHRLEDVALGEVLVDGTLPNISA 241
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Match: A0A660ZR49_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A660ZR49_9BACT) HSP 1 Score: 115 bits (288), Expect = 2.970e-28 Identity = 54/126 (42.86%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 1 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKYRKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAA 378 L D G +LGT+ P+++ PV+R CL++ P V+WK+R HP+P RR +AR +P+P L + + L NIE L +++L G F+ D+M+ AHFHRLE+VALG++L+ E LP AA Sbjct: 114 LRDDVQFGANLGTAIPLVSAPVIRACLRKLPLWHVMWKFRMHPVPDRRRRFPLARVIPIPNKLLLPAFVTIARALANIEGALSDREDWLLGPFTMVDVMLMAHFHRLEDVALGSVLDHELLPKTAA 239
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Match: A0A2A4RUG5_9HYPH (GST N-terminal domain-containing protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4RUG5_9HYPH) HSP 1 Score: 110 bits (274), Expect = 3.840e-26 Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 1 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKYRKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAA 378 L D +G +LGT+ P+L+ P+++ CLK+QP V+WK+RKHP R + R LP LS ++++ + + L IE L ++ GEFSQ D+MM AHFHR+E+VALG + + LPN+ A Sbjct: 115 LRDDAKVGRTLGTAIPILSAPIIQTCLKRQPFFHVMWKFRKHPRRDRAALFRLLRIRGLPRGLSARAVKTIAQGLLRIERQLAKSGPFILGEFSQIDVMMMAHFHRMEDVALGDVFASQHLPNLGA 240
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Match: A0A2A5EPL3_9HYPH (GST N-terminal domain-containing protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EPL3_9HYPH) HSP 1 Score: 109 bits (273), Expect = 5.490e-26 Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 1 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKYRKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAA 378 L D A +LGT+ PV+++P+++ CLK+QP V+WK+RKHP R R +P ++S ++++ + L IE L G +LFG+F+Q DIMM AHFHRLE+V LG +L E LP +AA Sbjct: 116 LRDDAAPARTLGTAIPVVSVPIIQACLKRQPFFHVMWKFRKHPKRERAALFRFLRVRSIPKTISDRAVRTIAVSLSRIEDALAKGGPWLFGDFTQIDIMMMAHFHRLEDVHLGEVLRSEDLPFVAA 241
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Match: A0A2Z4ULM7_9HYPH (Tetrachloro-P-hydroquinone reductive dehalogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4ULM7_9HYPH) HSP 1 Score: 87.0 bits (214), Expect = 1.860e-17 Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 1 LDDSRALGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKY-RKHPIPARRWGISMARSLP-LPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNIAA 378 LD LG + GTS + +L L+++PAL+V+W Y KHP+ R ++ R LP L +K + ++ L + E L G++YLFG+++ D MM AHFHRLE+VALG IL + PNI A Sbjct: 112 LDRDVELGGNFGTSVAGASTYLLANILQRRPALAVIWDYFLKHPMKERAVAFTILRLRGGLPDKLYKKFVSSLATGLLSTETALDHGKDYLFGDYTMIDTMMTAHFHRLEDVALGDILLSDDFPNIKA 239
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Match: A0A368BFW3_9GAMM (Glutathione S-transferase family protein n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A368BFW3_9GAMM) HSP 1 Score: 54.3 bits (129), Expect = 1.320e-5 Identity = 34/119 (28.57%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 19 LGVSLGTSTPVLTLPVLRYCLKQQPALSVLWKY-RKHPIPARRWGISMARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAHFHRLEEVALGAILEEEKLPNI 372 LG ++GTS P+ + ++ +K+ + S +WK +KHP P R+ + L + + + + + +E L + +E+LF +FS ADI + HRL ++ + +ILE ++L N+ Sbjct: 119 LGKTIGTSIPLFSAGLIENMIKKL-SFSAIWKILKKHPRPERKRAFLLMYFFSLKNKIGPIAYKGFVKGILELETAL-NDKEFLFNDFSHADINLMCCLHRLVDLRMDSILEMDELKNV 235 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100500.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100500.103.1 >prot_M-pyrifera_M_contig100500.103.1 ID=prot_M-pyrifera_M_contig100500.103.1|Name=mRNA_M-pyrifera_M_contig100500.103.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp MARSLPLPPSLSRKSLQNVGEELKNIEAMLQSGQEYLFGEFSQADIMMAAback to top mRNA from alignment at M-pyrifera_M_contig100500:2..513+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100500.103.1 ID=mRNA_M-pyrifera_M_contig100500.103.1|Name=mRNA_M-pyrifera_M_contig100500.103.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=512bp|location=Sequence derived from alignment at M-pyrifera_M_contig100500:2..513+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100500:2..513+ >mRNA_M-pyrifera_M_contig100500.103.1 ID=mRNA_M-pyrifera_M_contig100500.103.1|Name=mRNA_M-pyrifera_M_contig100500.103.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig100500:2..513+ (Macrocystis pyrifera P11B4 male)back to top |