prot_M-pyrifera_M_contig10047.98.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10047.98.1
Unique Nameprot_M-pyrifera_M_contig10047.98.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
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BLAST of mRNA_M-pyrifera_M_contig10047.98.1 vs. uniprot
Match: A0A6H5K108_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K108_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.880e-11
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:    1 MDNAKRLFSFGFVTLSQHGQRSVSPFDR------LSLPTESFCDVSFPAVSTDPLLDFKESVIQECGREAEDGVS 69
            MDNAKRLFSFGFVTL QH   +  PF R      L+LPTE+FCDV     +TD L   KE+V +E  R A D +S
Sbjct:  353 MDNAKRLFSFGFVTLKQH---AAQPFQRRLTGNMLALPTEAFCDVELTIAATDALRVVKETVFRE--RRAGDDLS 422
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BLAST of mRNA_M-pyrifera_M_contig10047.98.1 vs. uniprot
Match: D7G231_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G231_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.350e-10
Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 0 
Query:    1 MDNAKRLFSFGFVTLSQHGQRSVSPFDR------LSLPTESFCDVSFPAVSTDPLLDFKESVIQECGREA-EDGVS 69
            MDNAKRLFSFGFVTL QH   +  P  R      L LPTE+FCDV     +TD L  FKE+V++E  R+A ED VS
Sbjct:  353 MDNAKRLFSFGFVTLKQH---AAQPSQRRPAGNMLPLPTEAFCDVELTIAATDELRVFKEAVLRE--RQAGEDLVS 423
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10047.98.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K108_9PHAE3.880e-1153.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G231_ECTSI1.350e-1055.26SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10047contigM-pyrifera_M_contig10047:2628..2846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10047.98.1mRNA_M-pyrifera_M_contig10047.98.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10047 2601..2846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10047.98.1 ID=prot_M-pyrifera_M_contig10047.98.1|Name=mRNA_M-pyrifera_M_contig10047.98.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
MDNAKRLFSFGFVTLSQHGQRSVSPFDRLSLPTESFCDVSFPAVSTDPLL
DFKESVIQECGREAEDGVSLLGA
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