mRNA_M-pyrifera_M_contig100452.96.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100452.96.1
Unique NamemRNA_M-pyrifera_M_contig100452.96.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A7Z9LQD3_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9LQD3_9BACT)

HSP 1 Score: 237 bits (605), Expect = 4.450e-71
Identity = 136/226 (60.18%), Postives = 161/226 (71.24%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            GLI+ P+ IV +AP+LSK   TL TG+VDLDQ+AR RAEN+TWR +G     N  P        A  + PA V EYA  MPKSFF   +T  D   +   YLDEL++ALVLGLRDYFEKVG F+R LIALSGGRDSALCLL AV A KA+N G G V  A+RV  VYLPN+A+SS AT +AA+ L   LGVPFQ+VSI +E ++AL KAAELAGG + VTPLAKQN
Sbjct:  229 GLISMPDEIVVDAPLLSKKSWTLNTGIVDLDQIARERAENSTWRDAGSST--NDEPPFEVTPDNADPFVPASVEEYAAQMPKSFFESASTPND--KDVHVYLDELFDALVLGLRDYFEKVGTFERFLIALSGGRDSALCLLLAVHAAKAMNEGTGEVSFAERVNAVYLPNKAYSSDATENAARKLVGELGVPFQIVSISEEAEIALNKAAELAGGIENVTPLAKQN 450          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A7V2Y0K4_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y0K4_9BACT)

HSP 1 Score: 229 bits (584), Expect = 5.430e-68
Identity = 136/231 (58.87%), Postives = 163/231 (70.56%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSS---GKGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFF--PDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            G +A+P+ +V E P LSKA  TL  G+VDLD + R RAEN+TWR +   G+G           +      + PAP+A+Y   MP+SFF   P TT      + EQYLDEL++ALVLGLRDYFEKVG F+R L+ALSGGRDSALCLL AV A KAL  G      ADRV TVYLPN+AFSSSAT  AA++LAE LGVPFQVVSI DE +VAL+KAAELAGG D++TPLA+QN
Sbjct:  229 GFVASPDRLVVEGPALSKATWTLADGIVDLDAVDRARAENSTWRQAVVFGQG-----TNGTVIVDTSQGSFDPAPLADYVAGMPRSFFDAEPQTT----GASPEQYLDELFDALVLGLRDYFEKVGAFQRFLVALSGGRDSALCLLMAVHAAKALKEGREVHLYADRVRTVYLPNKAFSSSATEHAARSLAEELGVPFQVVSIEDEVEVALKKAAELAGGVDKITPLARQN 450          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A7Y5FA35_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5FA35_9BACT)

HSP 1 Score: 225 bits (573), Expect = 2.440e-66
Identity = 128/226 (56.64%), Postives = 158/226 (69.91%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            G+IATPEG+V E P+LSK Y TL TG+VDLD +AR R+ENTTWR      A  T   +  +      + PA V +YA  +PKSF+ P  +     N+A +YLDEL++ALVLGLRDYFEKVG F + L+ALSGGRDSALCLL AV A  AL  G+      DRV TVYLPN+A+SS AT DAA+ALA  LGVPF+VVSI +E  +AL+KA E+AG   +V+ LAKQN
Sbjct:  229 GIIATPEGVVAEGPLLSKQYWTLTTGIVDLDDIARQRSENTTWRLDAT--APGTRDGIELVDACDGTFIPASVKDYAAQLPKSFYVPGASWTV--NDATKYLDELFDALVLGLRDYFEKVGAFDKFLVALSGGRDSALCLLLAVHAAMALREGKDKKTHWDRVETVYLPNKAYSSKATEDAARALAHELGVPFKVVSIEEESGIALKKAGEMAGSPKKVSALAKQN 450          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A847GA34_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GA34_9BACT)

HSP 1 Score: 222 bits (565), Expect = 3.370e-65
Identity = 132/229 (57.64%), Postives = 162/229 (70.74%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWR---SSGKGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            GLIATPEG+V E P+LS+   TL TGVVDL  L R+RAENTTWR   ++G+   +       ++       TPAPV+EYA  +PKSF+    +      +    LDEL++ALVLGLRDYFEKVG F+R LIALSGGRDSALCLL AV A K+L GG    D  +RV TVYLPN+A SS AT DAA++LAE LGV F+VV+I DE ++ALEKAAE+AGG D+V P+AKQN
Sbjct:  229 GLIATPEGLVCEGPLLSREPWTLATGVVDLGDLDRIRAENTTWRQGVANGQEAGKTQIIDCPDV-----PHTPAPVSEYAAQLPKSFYIA-ASHAPAEQDRNPALDELFDALVLGLRDYFEKVGSFERFLIALSGGRDSALCLLMAVAAAKSLKGGPA--DYKNRVDTVYLPNKALSSGATLDAARSLAEELGVSFRVVTIHDEAELALEKAAEMAGGMDKVAPMAKQN 449          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A7C8AID1_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8AID1_9BACT)

HSP 1 Score: 221 bits (562), Expect = 1.090e-64
Identity = 129/234 (55.13%), Postives = 157/234 (67.09%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGRARNTAPSVANIAVQ---AKKWTPAPVA-----EYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            G IATP G+V E  IL   Y TL TGVVDLD +ARMRAEN++WR++   R   ++    ++  +    KK    P       E    +P +F+ P+TT     N    +LDEL++ALVLGLRDYFEKVGVFKR L+A+SGGRDSALCLL AV A K LN G      A+RV T YLPNEA SS AT DAA++LA+ LGV F+VVSI +E  VAL KAAEL GGED+VTPLA+QN
Sbjct:  229 GFIATPGGVVAEQHILPAKYWTLATGVVDLDDIARMRAENSSWRNAAAERRDKSSTETVDVCAKNAGPKKRPKKPAQASRGEELVTGLPANFYLPETTPTQ--NETHLFLDELFDALVLGLRDYFEKVGVFKRFLVAVSGGRDSALCLLLAVQAAKGLNEGRDAPRYAERVWTCYLPNEALSSDATRDAAESLAKELGVSFRVVSIAEEAAVALRKAAELMGGEDKVTPLARQN 460          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A831ULQ9_9BACT (NAD(+) synthase (glutamine-hydrolyzing) (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831ULQ9_9BACT)

HSP 1 Score: 213 bits (543), Expect = 1.130e-63
Identity = 126/228 (55.26%), Postives = 157/228 (68.86%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSG-KGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFP-DTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            G IATP+GIV E   L++    L TG VDL+ + R+RAEN+TWR    +G AR     V  + V    +TP+P+A+Y   MP  FF P D  E       E +LDEL++ LVLGLRDYFEKVGVF+R L+ALSGGRDSALCLL AV A KAL GG      A+RV+TVYL ++ +SS AT   A+ALAE LGV FQVVSIG+E ++AL KAAEL GGE++VT +A+QN
Sbjct:  229 GFIATPDGIVAEGKPLTRGPWALTTGDVDLEDVVRLRAENSTWREDAVRGVARE---GVLFVEVTEGGYTPSPLADYVAQMPAHFFMPSDEAE------REAFLDELFDGLVLGLRDYFEKVGVFRRFLVALSGGRDSALCLLLAVHAAKALGGGREAERYAERVSTVYLAHKDYSSGATQSVARALAEELGVAFQVVSIGEEAELALAKAAELVGGEEKVTAIARQN 447          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A7C3ATL5_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3ATL5_9BACT)

HSP 1 Score: 216 bits (551), Expect = 3.830e-63
Identity = 125/226 (55.31%), Postives = 155/226 (68.58%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            GLIA P+ +V E  ILSK   TL + +VDLD++AR RAENTTWR      ARN       I V    + PAP+  Y   MP SF+  D +      +   +LDEL++ALVLGLRDYFEKVG F+R L+ALSGGRDSALCLL AV+A KALN G+     ADRV+ VYLPN A+SS AT  AA+ LA+ LGV F+V+SI +E  +AL+KAAE+AGGED V P+A+QN
Sbjct:  229 GLIAMPDELVCEGRILSKKSWTLASAIVDLDEIARARAENTTWRLDAA--ARNGIGKTQVIEVADGAFVPAPIDLYVAQMPSSFYIGDLSPRKAERDP--WLDELFDALVLGLRDYFEKVGAFQRFLVALSGGRDSALCLLMAVEAAKALNEGQDADRYADRVSAVYLPNRAYSSKATEAAARGLAKELGVLFRVISIHEEADIALQKAAEMAGGEDHVAPMARQN 450          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A7V2TSD1_9BACT (NAD(+) synthase (glutamine-hydrolyzing) (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2TSD1_9BACT)

HSP 1 Score: 206 bits (523), Expect = 2.150e-60
Identity = 117/231 (50.65%), Postives = 153/231 (66.23%), Query Frame = 1
Query:    4 LIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGRARNTAPSVANIAVQAKK------WTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            +IATP+GI+ E P+LS+ Y T++  V DLDQ+ R R EN+TWR         T P  A   V A +      WTPAP+ EYAK +P SF+   T   +  +   + LDEL++ALVLGLRDYFEKVGVF++ L+ALSGGRDSALCLL AV+A K+L GG       + + +VYLPN   SSSAT DAA++LA+ L VPF+++ I +E  VA + AAEL GG + + PLA QN
Sbjct:  230 IIATPDGIIAEGPLLSRNYFTIQCAVADLDQVRRHRLENSTWRQV-------TQPDDAAAEVDAIRLSCGGTWTPAPIREYAKHLPPSFYI-STGSAETVSKEHKALDELFDALVLGLRDYFEKVGVFRKFLVALSGGRDSALCLLMAVEAAKSLQGGAAASTWQEHIESVYLPNSRHSSSATLDAAQSLAQELNVPFRILKIDEEVVVAEKLAAELMGGREHIAPLALQN 452          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A7C1GZ88_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1GZ88_9BACT)

HSP 1 Score: 201 bits (510), Expect = 3.550e-57
Identity = 118/226 (52.21%), Postives = 143/226 (63.27%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            GLIATPEG+V E   LSK Y TL    VDL ++ARMR ENTTW        +  A  V  +AV    +  AP+ +YA   P++ +     E     +    LD+L+ AL LGLRDYFEKVG F+R LIALSGGRDSALCLL AV A K L  G      A R+ T+YLPN + SS AT  AA+ALA+ LGVPFQV SI +E ++AL KAAE+ GG D V P+AKQN
Sbjct:  229 GLIATPEGLVCEGHTLSKQYWTLAAATVDLGEIARMRMENTTWWQDTA--IQGAAQRVKIVAVDKPSYKSAPMRDYAAQQPRNHYLRQ--EAQNKRDGASALDDLFAALSLGLRDYFEKVGSFERFLIALSGGRDSALCLLIAVRAAKMLKEGRDAKQYAKRINTIYLPNASLSSKATQSAARALADELGVPFQVASIHEEAEMALAKAAEIVGGMDNVAPMAKQN 450          
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Match: A0A1V6EPR7_9BACT (Glutamine-dependent NAD(+) synthetase n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6EPR7_9BACT)

HSP 1 Score: 192 bits (489), Expect = 3.880e-54
Identity = 112/226 (49.56%), Postives = 143/226 (63.27%), Query Frame = 1
Query:    1 GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGRARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQYLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKALNGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGDECKVALEKAAELAGGEDRVTPLAKQN 678
            GLIA+P G+  E P+LSK   TL   V++LD++   R ENTTWR       +    ++  I      +TPAP   YA   P+S++ P           +  LDEL++AL LGLRDYFEKVGVFK+ L+ALSGGRDSALCLL AV A K L  G    + AD V+T+YLPN + SS  T +AA+ LA  L VPF+VVSI +E KVAL KAAE+ GGE+ V P+ +QN
Sbjct:  229 GLIASPAGLACEGPLLSKRAWTLSNAVLNLDEIEHSRMENTTWRQYAGTDVQQGQTTM--IEAGNGTFTPAPAKRYAAQQPRSYYLPSAHR--RKQERDPALDELFDALALGLRDYFEKVGVFKKFLVALSGGRDSALCLLLAVRAAKMLREGRESENYADYVSTLYLPNGSLSSEGTQNAARGLAAELHVPFRVVSIEEEAKVALAKAAEIMGGEEGVAPMTRQN 450          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100452.96.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9LQD3_9BACT4.450e-7160.18Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]
A0A7V2Y0K4_9BACT5.430e-6858.87Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]
A0A7Y5FA35_9BACT2.440e-6656.64Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]
A0A847GA34_9BACT3.370e-6557.64Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]
A0A7C8AID1_9BACT1.090e-6455.13Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]
A0A831ULQ9_9BACT1.130e-6355.26NAD(+) synthase (glutamine-hydrolyzing) (Fragment)... [more]
A0A7C3ATL5_9BACT3.830e-6355.31Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]
A0A7V2TSD1_9BACT2.150e-6050.65NAD(+) synthase (glutamine-hydrolyzing) (Fragment)... [more]
A0A7C1GZ88_9BACT3.550e-5752.21Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]
A0A1V6EPR7_9BACT3.880e-5449.56Glutamine-dependent NAD(+) synthetase n=1 Tax=Cand... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100452contigM-pyrifera_M_contig100452:2..679 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score110.5
Seed ortholog evalue1e-21
Seed eggNOG ortholog483219.LILAB_12210
Preferred namenadE
KEGG rclassRC00010,RC00100
KEGG koko:K01950
KEGG ReactionR00257
KEGG Pathwayko00760,ko01100,map00760,map01100
KEGG ModuleM00115
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003952,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016020,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EggNOG OGs1MU9U@1224,2WIV4@28221,2YTUK@29,42N86@68525,COG0171@1,COG0171@2,COG0388@1,COG0388@2
EC6.3.5.1
COG Functional cat.H
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size678
Cds size678
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.6114786-CDS-M-pyrifera_M_contig100452:1..6791622815500.6114786-CDS-M-pyrifera_M_contig100452:1..679Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100452 2..679 +
1692277439.6181264-CDS-M-pyrifera_M_contig100452:1..6791692277439.6181264-CDS-M-pyrifera_M_contig100452:1..679Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100452 2..679 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100452.96.1prot_M-pyrifera_M_contig100452.96.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100452 2..679 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100452.96.1

>prot_M-pyrifera_M_contig100452.96.1 ID=prot_M-pyrifera_M_contig100452.96.1|Name=mRNA_M-pyrifera_M_contig100452.96.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
GLIATPEGIVTEAPILSKAYSTLETGVVDLDQLARMRAENTTWRSSGKGR
ARNTAPSVANIAVQAKKWTPAPVAEYAKTMPKSFFFPDTTEIDGNNNAEQ
YLDELYNALVLGLRDYFEKVGVFKRILIALSGGRDSALCLLAAVDAIKAL
NGGEGGVDPADRVATVYLPNEAFSSSATHDAAKALAEALGVPFQVVSIGD
ECKVALEKAAELAGGEDRVTPLAKQN
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mRNA from alignment at M-pyrifera_M_contig100452:2..679+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100452.96.1 ID=mRNA_M-pyrifera_M_contig100452.96.1|Name=mRNA_M-pyrifera_M_contig100452.96.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig100452:2..679+ (Macrocystis pyrifera P11B4 male)
GGCCTCATTGCAACGCCGGAAGGCATCGTGACGGAAGCGCCGATTCTTTC AAAAGCCTATTCGACGCTGGAAACAGGCGTTGTCGATCTGGATCAGCTCG CGAGGATGCGTGCGGAAAACACGACGTGGCGGTCTAGTGGCAAGGGTCGC GCTAGGAATACTGCGCCGTCCGTTGCCAACATTGCGGTTCAAGCTAAGAA GTGGACGCCTGCGCCCGTCGCTGAGTATGCGAAAACCATGCCCAAGAGTT TCTTTTTTCCGGATACGACGGAAATCGACGGTAACAACAACGCTGAACAA TACCTTGACGAATTGTACAATGCGTTGGTACTCGGTTTGCGTGATTACTT TGAGAAGGTCGGTGTCTTCAAGAGAATTCTTATCGCGCTATCCGGTGGCC GGGACAGTGCGTTGTGCTTGCTGGCCGCGGTCGATGCGATTAAAGCGTTG AATGGCGGCGAAGGCGGTGTCGATCCAGCCGATCGCGTGGCAACGGTTTA TTTGCCGAACGAAGCGTTTAGCTCCAGCGCAACGCATGACGCTGCAAAAG CCCTCGCGGAGGCACTCGGCGTGCCGTTTCAGGTTGTGTCGATTGGCGAT GAGTGCAAAGTGGCGTTGGAAAAAGCGGCCGAGTTGGCGGGTGGTGAAGA CCGTGTGACGCCGCTCGCCAAACAGAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100452:2..679+

>mRNA_M-pyrifera_M_contig100452.96.1 ID=mRNA_M-pyrifera_M_contig100452.96.1|Name=mRNA_M-pyrifera_M_contig100452.96.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig100452:2..679+ (Macrocystis pyrifera P11B4 male)
GGCCTCATTGCAACGCCGGAAGGCATCGTGACGGAAGCGCCGATTCTTTC
AAAAGCCTATTCGACGCTGGAAACAGGCGTTGTCGATCTGGATCAGCTCG
CGAGGATGCGTGCGGAAAACACGACGTGGCGGTCTAGTGGCAAGGGTCGC
GCTAGGAATACTGCGCCGTCCGTTGCCAACATTGCGGTTCAAGCTAAGAA
GTGGACGCCTGCGCCCGTCGCTGAGTATGCGAAAACCATGCCCAAGAGTT
TCTTTTTTCCGGATACGACGGAAATCGACGGTAACAACAACGCTGAACAA
TACCTTGACGAATTGTACAATGCGTTGGTACTCGGTTTGCGTGATTACTT
TGAGAAGGTCGGTGTCTTCAAGAGAATTCTTATCGCGCTATCCGGTGGCC
GGGACAGTGCGTTGTGCTTGCTGGCCGCGGTCGATGCGATTAAAGCGTTG
AATGGCGGCGAAGGCGGTGTCGATCCAGCCGATCGCGTGGCAACGGTTTA
TTTGCCGAACGAAGCGTTTAGCTCCAGCGCAACGCATGACGCTGCAAAAG
CCCTCGCGGAGGCACTCGGCGTGCCGTTTCAGGTTGTGTCGATTGGCGAT
GAGTGCAAAGTGGCGTTGGAAAAAGCGGCCGAGTTGGCGGGTGGTGAAGA
CCGTGTGACGCCGCTCGCCAAACAGAACGGCCTCATTGCAACGCCGGAAG
GCATCGTGACGGAAGCGCCGATTCTTTCAAAAGCCTATTCGACGCTGGAA
ACAGGCGTTGTCGATCTGGATCAGCTCGCGAGGATGCGTGCGGAAAACAC
GACGTGGCGGTCTAGTGGCAAGGGTCGCGCTAGGAATACTGCGCCGTCCG
TTGCCAACATTGCGGTTCAAGCTAAGAAGTGGACGCCTGCGCCCGTCGCT
GAGTATGCGAAAACCATGCCCAAGAGTTTCTTTTTTCCGGATACGACGGA
AATCGACGGTAACAACAACGCTGAACAATACCTTGACGAATTGTACAATG
CGTTGGTACTCGGTTTGCGTGATTACTTTGAGAAGGTCGGTGTCTTCAAG
AGAATTCTTATCGCGCTATCCGGTGGCCGGGACAGTGCGTTGTGCTTGCT
GGCCGCGGTCGATGCGATTAAAGCGTTGAATGGCGGCGAAGGCGGTGTCG
ATCCAGCCGATCGCGTGGCAACGGTTTATTTGCCGAACGAAGCGTTTAGC
TCCAGCGCAACGCATGACGCTGCAAAAGCCCTCGCGGAGGCACTCGGCGT
GCCGTTTCAGGTTGTGTCGATTGGCGATGAGTGCAAAGTGGCGTTGGAAA
AAGCGGCCGAGTTGGCGGGTGGTGAAGACCGTGTGACGCCGCTCGCCAAA
CAGAAC
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