prot_M-pyrifera_M_contig100440.92.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100440.92.1
Unique Nameprot_M-pyrifera_M_contig100440.92.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A804KMM4_MUSAM (60S ribosomal protein L6 n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KMM4_MUSAM)

HSP 1 Score: 99.8 bits (247), Expect = 2.380e-23
Identity = 59/126 (46.83%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLD--ETTSAYLKAKFKLSSHSRPHEMKF 126
            LL + GP+ +NGVPLRRVNQAYVIATS K+DISGV V      D ++++ K      ++ T+ GE  FF  D    KA +PQE+KD Q+AVD  ++++++  E    YL A+F L S  +PHE+KF
Sbjct:  118 LLLVTGPFKINGVPLRRVNQAYVIATSTKVDISGVNVDKF--DDKYFTKEK------KKTTKKGEGEFFETDKEETKA-LPQEKKDDQKAVDSQLIKAIEAVEDLKVYLGARFSLRSGMKPHELKF 234          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A812L9C5_9DINO (RPL6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L9C5_9DINO)

HSP 1 Score: 97.8 bits (242), Expect = 4.000e-23
Identity = 58/124 (46.77%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTSAYLKAKFKLSSHSRPHEMKF 126
            LL + GP+++NGVPLRR+NQ Y IAT  KLD+SGV++P +   D+F+ + KAAK  +  A    + A  A   VT+      E+K  Q+AVD AI  +L     AYLK+ F LS H +PHEMKF
Sbjct:   66 LLLVTGPFSVNGVPLRRLNQVYAIATELKLDVSGVKLPESV-NDSFFKKTKAAKGKKSEADFMAQGAAAAGPVVTD------EKKSIQKAVDAAIEGALGADEKAYLKSLFSLSKHDKPHEMKF 182          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A7S1LWQ5_ALECA (Hypothetical protein n=2 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LWQ5_ALECA)

HSP 1 Score: 95.9 bits (237), Expect = 2.250e-22
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTSAYLKAKFKLSSHSRPHEMKF 126
            LL + GPYA+NG+PLRRVNQ Y IATS K+D+ G    +    DA++      +  +++  +  E  FFAP+   E+  + +E+KD Q+ +DEA+V  LD T   YLK+ F LS    PHEMKF
Sbjct:   67 LLLVTGPYAVNGIPLRRVNQRYCIATSHKVDVGGADYSSVG--DAYFKR----EEDKKKKAKKTESGFFAPE--AERKGMSEEKKDGQKKMDEAVVGKLDATEKMYLKSLFSLSEKMYPHEMKF 182          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A3B4XB13_SERLL (60S ribosomal protein L6 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A3B4XB13_SERLL)

HSP 1 Score: 94.4 bits (233), Expect = 1.080e-21
Identity = 59/125 (47.20%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTSA-YLKAKFKLSSHSRPHEMKF 126
            LL + GPY +NG+PLRRVNQAYVIATS K+D+SGV    A   D+++ + KA K  ++ A    E+A   P+       +  ERK  Q AVD A+++SL E   A YLKA+F LS   +PH MKF
Sbjct:   75 LLLVTGPYQVNGIPLRRVNQAYVIATSTKVDVSGVDT--AKFVDSYFGKAKAGKKDKKSAEEMFEEAKATPE-------VSAERKADQAAVDAALMKSLKEPLMAKYLKARFSLSKADKPHLMKF 190          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: E6R752_CRYGW (60S ribosomal protein L6 n=13 Tax=Cryptococcus TaxID=5206 RepID=E6R752_CRYGW)

HSP 1 Score: 95.1 bits (235), Expect = 1.470e-21
Identity = 60/126 (47.62%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLD--ETTSAYLKAKFKLSSHSRPHEMKF 126
            LL ++GP+ LNGVPLRRV+QAYVIATS K+DIS V +P +  +DA++++ KAAKA++       E  FF   +  EK   P+E+K  Q+AVD A++ S+   E  S YLK+ + LS   R HE+KF
Sbjct:  120 LLLVSGPHKLNGVPLRRVSQAYVIATSTKVDISSVSIPESI-SDAYFAKAKAAKASK-------EGEFFG--EGKEKKAFPEEKKAEQKAVDAALIASIKKVENLSKYLKSSWGLSKSDRFHELKF 235          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A484DQP3_BRELC (60S ribosomal protein L6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQP3_BRELC)

HSP 1 Score: 94.4 bits (233), Expect = 2.270e-21
Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETT--SAYLKAKFKLSSHSRPHEMKF 126
            LL + GPY +NGVPLRRVNQ+YVIATS K++I G+ +PA    DA++++ K +K+++       E+ FFA  +V     IP++RK+ Q++VD A+++ LD      AYL AKF L+ + R H +KF
Sbjct:  109 LLLVTGPYKVNGVPLRRVNQSYVIATSTKVNIEGLELPAV--DDAYFAKEKISKSSK-------EEQFFAQSNVAPV--IPEQRKNDQKSVDSALLKKLDAEPFLKAYLNAKFSLTKNDRVHALKF 223          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A2I0AXU1_9ASPA (60S ribosomal protein L6 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AXU1_9ASPA)

HSP 1 Score: 94.4 bits (233), Expect = 2.730e-21
Identity = 59/126 (46.83%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTS--AYLKAKFKLSSHSRPHEMKF 126
            LL + GP+ +NGVPLRRVNQ YVIATS K+DISGV V      D F       +  R++    GE  FF  D   +KA +PQE+KDAQ+AVD  +++++D      AYL A+F L    +PHE+KF
Sbjct:  116 LLLVTGPFKINGVPLRRVNQVYVIATSTKVDISGVNV------DKFDDRYFMKEKQRKKKKTEGE--FFEADKEEKKA-LPQEKKDAQKAVDTPLLKAVDAVADLRAYLGARFSLKDGMKPHELKF 232          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: Q9SMI5_CYAPA (60S ribosomal protein L6 n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=Q9SMI5_CYAPA)

HSP 1 Score: 94.0 bits (232), Expect = 2.750e-21
Identity = 61/126 (48.41%), Postives = 81/126 (64.29%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSL--DETTSAYLKAKFKLSSHSRPHEMKF 126
            LL + GPY LNGVPLRRVNQ+YVIATS K+D+S V V      D ++ + KAA      A + GEDAFF  ++  +K +I  ERK  Q+AVD +I+ ++  D+   AYL A+F L+    PHEMKF
Sbjct:  101 LLLVTGPYKLNGVPLRRVNQSYVIATSTKVDVSKVDVKKF--DDNYFKKPKAA------AAKKGEDAFFQSEE--KKKEIKPERKTDQKAVDASIIAAVKKDKVLRAYLHARFTLTKGQFPHEMKF 216          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A813A1W2_9DINO (60S ribosomal protein L6 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A1W2_9DINO)

HSP 1 Score: 94.0 bits (232), Expect = 2.870e-21
Identity = 58/126 (46.03%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSL--DETTSAYLKAKFKLSSHSRPHEMKF 126
            LL + GPY +NGVPLRR++Q+YVIATS K+D+SGV +P +   D F    K++KA RR    + ++ FF   +  +K D+P ER +AQ+ VD AI+ SL  D+   AYL A+F L++ +  HE+KF
Sbjct:  104 LLLVTGPYKVNGVPLRRLDQSYVIATSTKIDVSGVSIPESVNDDFF----KSSKADRR----SDKEKFF---NKPKKVDMPAERTEAQKKVDNAILSSLSKDKLLKAYLNARFSLTNGTYAHELKF 218          
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A1B9INX4_9TREE (60S ribosomal protein L6 n=5 Tax=Kwoniella TaxID=490731 RepID=A0A1B9INX4_9TREE)

HSP 1 Score: 94.4 bits (233), Expect = 2.900e-21
Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 0
Query:    3 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLD--ETTSAYLKAKFKLSSHSRPHEMKF 126
            LL ++GP+ +NGVPLRRV+QAYVIATS K+DISGV VP     DAF+ + KAAK ++       E  FF   +  EK   P+E+K  Q+AVD A++ S+   +  + YLKA + LS   R HE+KF
Sbjct:  120 LLLVSGPFKINGVPLRRVSQAYVIATSTKVDISGVSVPETV-NDAFFIKSKAAKGSK-------EGEFFG--EGKEKKVFPEEKKSEQKAVDAALIASIKKVDNLAKYLKASWGLSKGDRFHELKF 235          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A804KMM4_MUSAM2.380e-2346.8360S ribosomal protein L6 n=1 Tax=Musa acuminata su... [more]
A0A812L9C5_9DINO4.000e-2346.77RPL6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S1LWQ5_ALECA2.250e-2243.55Hypothetical protein n=2 Tax=Alexandrium catenella... [more]
A0A3B4XB13_SERLL1.080e-2147.2060S ribosomal protein L6 n=2 Tax=Eukaryota TaxID=2... [more]
E6R752_CRYGW1.470e-2147.6260S ribosomal protein L6 n=13 Tax=Cryptococcus Tax... [more]
A0A484DQP3_BRELC2.270e-2144.4460S ribosomal protein L6 n=1 Tax=Bremia lactucae T... [more]
A0A2I0AXU1_9ASPA2.730e-2146.8360S ribosomal protein L6 n=1 Tax=Apostasia shenzhe... [more]
Q9SMI5_CYAPA2.750e-2148.4160S ribosomal protein L6 n=1 Tax=Cyanophora parado... [more]
A0A813A1W2_9DINO2.870e-2146.0360S ribosomal protein L6 n=1 Tax=Symbiodinium sp. ... [more]
A0A1B9INX4_9TREE2.900e-2147.6260S ribosomal protein L6 n=5 Tax=Kwoniella TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR00091560S ribosomal protein L6EPFAMPF01159Ribosomal_L6ecoord: 12..126
e-value: 3.8E-29
score: 101.5
IPR00091560S ribosomal protein L6EPANTHERPTHR1071560S RIBOSOMAL PROTEIN L6coord: 3..126
IPR00091560S ribosomal protein L6EPROSITEPS01170RIBOSOMAL_L6Ecoord: 13..31
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 5..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100440contigM-pyrifera_M_contig100440:178..558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100440.92.1mRNA_M-pyrifera_M_contig100440.92.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100440 178..558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100440.92.1 ID=prot_M-pyrifera_M_contig100440.92.1|Name=mRNA_M-pyrifera_M_contig100440.92.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
MVLLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYS
EGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRS
LDETTSAYLKAKFKLSSHSRPHEMKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR00091560S_ribosomal_L6E
IPR008991Translation_prot_SH3-like_sf