mRNA_M-pyrifera_M_contig100440.92.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A804KMM4_MUSAM (60S ribosomal protein L6 n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KMM4_MUSAM) HSP 1 Score: 99.8 bits (247), Expect = 2.380e-23 Identity = 59/126 (46.83%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLD--ETTSAYLKAKFKLSSHSRPHEMKF 378 LL + GP+ +NGVPLRRVNQAYVIATS K+DISGV V D ++++ K ++ T+ GE FF D KA +PQE+KD Q+AVD ++++++ E YL A+F L S +PHE+KF Sbjct: 118 LLLVTGPFKINGVPLRRVNQAYVIATSTKVDISGVNVDKF--DDKYFTKEK------KKTTKKGEGEFFETDKEETKA-LPQEKKDDQKAVDSQLIKAIEAVEDLKVYLGARFSLRSGMKPHELKF 234
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A812L9C5_9DINO (RPL6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L9C5_9DINO) HSP 1 Score: 97.8 bits (242), Expect = 4.000e-23 Identity = 58/124 (46.77%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTSAYLKAKFKLSSHSRPHEMKF 378 LL + GP+++NGVPLRR+NQ Y IAT KLD+SGV++P + D+F+ + KAAK + A + A A VT+ E+K Q+AVD AI +L AYLK+ F LS H +PHEMKF Sbjct: 66 LLLVTGPFSVNGVPLRRLNQVYAIATELKLDVSGVKLPESV-NDSFFKKTKAAKGKKSEADFMAQGAAAAGPVVTD------EKKSIQKAVDAAIEGALGADEKAYLKSLFSLSKHDKPHEMKF 182
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A7S1LWQ5_ALECA (Hypothetical protein n=2 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LWQ5_ALECA) HSP 1 Score: 95.9 bits (237), Expect = 2.250e-22 Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTSAYLKAKFKLSSHSRPHEMKF 378 LL + GPYA+NG+PLRRVNQ Y IATS K+D+ G + DA++ + +++ + E FFAP+ E+ + +E+KD Q+ +DEA+V LD T YLK+ F LS PHEMKF Sbjct: 67 LLLVTGPYAVNGIPLRRVNQRYCIATSHKVDVGGADYSSVG--DAYFKR----EEDKKKKAKKTESGFFAPE--AERKGMSEEKKDGQKKMDEAVVGKLDATEKMYLKSLFSLSEKMYPHEMKF 182
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A3B4XB13_SERLL (60S ribosomal protein L6 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A3B4XB13_SERLL) HSP 1 Score: 94.4 bits (233), Expect = 1.080e-21 Identity = 59/125 (47.20%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTSA-YLKAKFKLSSHSRPHEMKF 378 LL + GPY +NG+PLRRVNQAYVIATS K+D+SGV A D+++ + KA K ++ A E+A P+ + ERK Q AVD A+++SL E A YLKA+F LS +PH MKF Sbjct: 75 LLLVTGPYQVNGIPLRRVNQAYVIATSTKVDVSGVDT--AKFVDSYFGKAKAGKKDKKSAEEMFEEAKATPE-------VSAERKADQAAVDAALMKSLKEPLMAKYLKARFSLSKADKPHLMKF 190
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: E6R752_CRYGW (60S ribosomal protein L6 n=13 Tax=Cryptococcus TaxID=5206 RepID=E6R752_CRYGW) HSP 1 Score: 95.1 bits (235), Expect = 1.470e-21 Identity = 60/126 (47.62%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLD--ETTSAYLKAKFKLSSHSRPHEMKF 378 LL ++GP+ LNGVPLRRV+QAYVIATS K+DIS V +P + +DA++++ KAAKA++ E FF + EK P+E+K Q+AVD A++ S+ E S YLK+ + LS R HE+KF Sbjct: 120 LLLVSGPHKLNGVPLRRVSQAYVIATSTKVDISSVSIPESI-SDAYFAKAKAAKASK-------EGEFFG--EGKEKKAFPEEKKAEQKAVDAALIASIKKVENLSKYLKSSWGLSKSDRFHELKF 235
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A484DQP3_BRELC (60S ribosomal protein L6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQP3_BRELC) HSP 1 Score: 94.4 bits (233), Expect = 2.270e-21 Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETT--SAYLKAKFKLSSHSRPHEMKF 378 LL + GPY +NGVPLRRVNQ+YVIATS K++I G+ +PA DA++++ K +K+++ E+ FFA +V IP++RK+ Q++VD A+++ LD AYL AKF L+ + R H +KF Sbjct: 109 LLLVTGPYKVNGVPLRRVNQSYVIATSTKVNIEGLELPAV--DDAYFAKEKISKSSK-------EEQFFAQSNVAPV--IPEQRKNDQKSVDSALLKKLDAEPFLKAYLNAKFSLTKNDRVHALKF 223
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A2I0AXU1_9ASPA (60S ribosomal protein L6 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AXU1_9ASPA) HSP 1 Score: 94.4 bits (233), Expect = 2.730e-21 Identity = 59/126 (46.83%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLDETTS--AYLKAKFKLSSHSRPHEMKF 378 LL + GP+ +NGVPLRRVNQ YVIATS K+DISGV V D F + R++ GE FF D +KA +PQE+KDAQ+AVD +++++D AYL A+F L +PHE+KF Sbjct: 116 LLLVTGPFKINGVPLRRVNQVYVIATSTKVDISGVNV------DKFDDRYFMKEKQRKKKKTEGE--FFEADKEEKKA-LPQEKKDAQKAVDTPLLKAVDAVADLRAYLGARFSLKDGMKPHELKF 232
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: Q9SMI5_CYAPA (60S ribosomal protein L6 n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=Q9SMI5_CYAPA) HSP 1 Score: 94.0 bits (232), Expect = 2.750e-21 Identity = 61/126 (48.41%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSL--DETTSAYLKAKFKLSSHSRPHEMKF 378 LL + GPY LNGVPLRRVNQ+YVIATS K+D+S V V D ++ + KAA A + GEDAFF ++ +K +I ERK Q+AVD +I+ ++ D+ AYL A+F L+ PHEMKF Sbjct: 101 LLLVTGPYKLNGVPLRRVNQSYVIATSTKVDVSKVDVKKF--DDNYFKKPKAA------AAKKGEDAFFQSEE--KKKEIKPERKTDQKAVDASIIAAVKKDKVLRAYLHARFTLTKGQFPHEMKF 216
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A813A1W2_9DINO (60S ribosomal protein L6 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A1W2_9DINO) HSP 1 Score: 94.0 bits (232), Expect = 2.870e-21 Identity = 58/126 (46.03%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSL--DETTSAYLKAKFKLSSHSRPHEMKF 378 LL + GPY +NGVPLRR++Q+YVIATS K+D+SGV +P + D F K++KA RR + ++ FF + +K D+P ER +AQ+ VD AI+ SL D+ AYL A+F L++ + HE+KF Sbjct: 104 LLLVTGPYKVNGVPLRRLDQSYVIATSTKIDVSGVSIPESVNDDFF----KSSKADRR----SDKEKFF---NKPKKVDMPAERTEAQKKVDNAILSSLSKDKLLKAYLNARFSLTNGTYAHELKF 218
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Match: A0A1B9INX4_9TREE (60S ribosomal protein L6 n=5 Tax=Kwoniella TaxID=490731 RepID=A0A1B9INX4_9TREE) HSP 1 Score: 94.4 bits (233), Expect = 2.900e-21 Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 7 LLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSEGKAAKAARRRATRAGEDAFFAPDDVTEKADIPQERKDAQRAVDEAIVRSLD--ETTSAYLKAKFKLSSHSRPHEMKF 378 LL ++GP+ +NGVPLRRV+QAYVIATS K+DISGV VP DAF+ + KAAK ++ E FF + EK P+E+K Q+AVD A++ S+ + + YLKA + LS R HE+KF Sbjct: 120 LLLVSGPFKINGVPLRRVSQAYVIATSTKVDISGVSVPETV-NDAFFIKSKAAKGSK-------EGEFFG--EGKEKKVFPEEKKSEQKAVDAALIASIKKVDNLAKYLKASWGLSKGDRFHELKF 235 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100440.92.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100440.92.1 >prot_M-pyrifera_M_contig100440.92.1 ID=prot_M-pyrifera_M_contig100440.92.1|Name=mRNA_M-pyrifera_M_contig100440.92.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp MVLLGIAGPYALNGVPLRRVNQAYVIATSKKLDISGVRVPAAAATDAFYSback to top mRNA from alignment at M-pyrifera_M_contig100440:178..558+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100440.92.1 ID=mRNA_M-pyrifera_M_contig100440.92.1|Name=mRNA_M-pyrifera_M_contig100440.92.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=381bp|location=Sequence derived from alignment at M-pyrifera_M_contig100440:178..558+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100440:178..558+ >mRNA_M-pyrifera_M_contig100440.92.1 ID=mRNA_M-pyrifera_M_contig100440.92.1|Name=mRNA_M-pyrifera_M_contig100440.92.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig100440:178..558+ (Macrocystis pyrifera P11B4 male)back to top |