mRNA_M-pyrifera_M_contig100002.9.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: I1GKZ1_BRADI (Poly(ADP-ribose) glycohydrolase n=3 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GKZ1_BRADI) HSP 1 Score: 75.9 bits (185), Expect = 3.260e-13 Identity = 55/150 (36.67%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 1 STPLCPLRV-EAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQPIPPSPSSSSPTPP------QTISITCIDATKFPAKHSPLECTHASILRELRKAMAGFI 429 STPLCP RV +G D + A+ V+FAN++LGGG L G VQEE+ + PE++ M M M D EA++I+ RF++ GYG + + + T P + I IDA P K L+ + +LRE+ KA+ GF+ Sbjct: 241 STPLCPFRVISSGLIEDE--EQEALEVDFANKYLGGGALSRGCVQEEIRFMINPELIVGMLFMASMEDNEAIEIVGAERFSQYMGYGSSFRFV----GDYLDTKPLDALGRRKTRILAIDALDCPTK---LQYETSGLLREVNKALCGFL 381
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: A0A0D8XX85_DICVI (Poly(ADP-ribose) glycohydrolase n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8XX85_DICVI) HSP 1 Score: 74.7 bits (182), Expect = 3.330e-13 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 61 EGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQPIPPSPSSSSPTPPQTISITC----IDATKFPAKHSPLECTHASILRELRKAMAGFIQRGEE 444 G + V+FAN ++GGGVL +GAVQEE+ L CPE++ + KM E + I+ +R + GYG+ +Q P S + + + C +DAT F + ++ SI REL KA GF+ RG+E Sbjct: 16 NGCLQVDFANEYIGGGVLNWGAVQEEIRFLICPEMIVSCLLCEKMGPLEVIHIVGAQRHSSYIGYGETLQ-WAPYEEYGSESRDKFCRVKCEVVAMDATLFKSSSKWIQYDKMSIDRELNKAYTGFMSRGKE 146
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: A0A812WA90_SYMPI (Poly(ADP-ribose) glycohydrolase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WA90_SYMPI) HSP 1 Score: 75.9 bits (185), Expect = 3.470e-13 Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 1 STPLCPLRV-EAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQPI----PPSPSSSSPTPPQTISITCIDATKFPAKHSPL--ECTHASILRELRKAMAGF 426 S PL P++V + G + G + +FANR+LGGGVL G VQEE+ CPE+ A M + M D EA+ I+ +F+ SGYG++++ P+P T ++IT +DA F K +PL + +LREL KA F Sbjct: 125 SQPLLPMQVADQGIGLEDESGRGCLHADFANRYLGGGVLVGGCVQEEIRFSICPELCAAMLVCPYMLDHEAITIVGGEQFSGYSGYGRSLEYAGDFRDPTPRDEDGT--VLVAITAMDAIDFRGKAAPLRQQLEDNLLLRELEKAAVAF 271
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: A0A8B8HF59_9NEOP (Poly(ADP-ribose) glycohydrolase n=3 Tax=Vanessa TaxID=42274 RepID=A0A8B8HF59_9NEOP) HSP 1 Score: 75.5 bits (184), Expect = 4.710e-13 Identity = 52/140 (37.14%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 19 LRVEAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQ----PIPPSPSSSSPTPPQTISITCIDATKFPAKHSPLECTHASILRELRKAMAGF 426 LRV A + G I V+FAN+FLGGGVL +G+VQEE+ + CPE++ M + EA+ I+ +++K SGYG + Q + +P SS + ++ IDA F K E +I REL KA GF Sbjct: 298 LRVHADATSTIEDAHGLIQVDFANKFLGGGVLNYGSVQEEIRFMICPELMISMLFTEALRPNEALMIIGCEQYSKYSGYGHSFQWAGEHVDATPRDSSGR--RRCAVLAIDAQPFSNKSQ--EYKKEAITRELDKAWVGF 433
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: UPI001E271F5D (poly(ADP-ribose) glycohydrolase n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E271F5D) HSP 1 Score: 75.1 bits (183), Expect = 6.350e-13 Identity = 51/146 (34.93%), Postives = 74/146 (50.68%), Query Frame = 1 Query: 1 STPLCPLRVEAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQ----PIPPSPSSSSPTPPQTISITCIDATKFPAKHSPLECTHASILRELRKAMAGF 426 S L LRV + G I V+FANR+LGGGVL +G VQEE+ + CPE++ M + EA+ I+ +++K SGYG + Q + +P S + S+ IDA P++ E ++ REL KA GF Sbjct: 271 SAALAALRVHVDAAGTIEDAHGLIQVDFANRYLGGGVLGYGCVQEEIRFMICPELIITMLFTEALKSNEALMIIGCEQYSKYSGYGHSFQWAGEYVDRTPYDCSGR--RRCSVLAIDA--LPSRGKVQEYRIETVTRELNKAWVGF 412
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: UPI001F135B95 (poly(ADP-ribose) glycohydrolase-like n=1 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F135B95) HSP 1 Score: 75.1 bits (183), Expect = 6.410e-13 Identity = 53/143 (37.06%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 10 LCPLRVEAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQ----PIPPSPSSSSPTPPQTISITCIDATKFPAKHSPLECTHASILRELRKAMAGF 426 L LRV A + G I V+FAN+FLGGGVL +G+VQEE+ + CPE++ M + EA+ I+ +++K SGYG + Q + +P SS + ++ IDA F K E +I REL KA GF Sbjct: 298 LSALRVHADAAGTIEEAHGLIQVDFANKFLGGGVLNYGSVQEEIRFMICPELMISMLFTEALRPNEALMIIGCEQYSKYSGYGHSFQWAGEYVDTTPWDSSGR--RRCAVLAIDAQPFSNKSQ--EYRKEAITRELDKAWVGF 436
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: A0A3B6I0U8_WHEAT (Poly(ADP-ribose) glycohydrolase n=15 Tax=Triticeae TaxID=147389 RepID=A0A3B6I0U8_WHEAT) HSP 1 Score: 74.3 bits (181), Expect = 1.120e-12 Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 1 STPLCPLRV-EAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQ------PIPPSPSSSSPTPPQTISITCIDATKFPAKHSPLECTHASILRELRKAMAGFI 429 S PLCP RV +G D E A+ V+FAN++LGGG L G VQEE+ + PE++ M M M D EA++I+ RF++ GYG + + + P + + I IDA P K L+ + +LRE+ KA GF+ Sbjct: 236 SVPLCPFRVISSGLIEDE--EEEALEVDFANKYLGGGALSRGCVQEEIRFMINPELIVGMLFMASMEDNEAIEIVGAERFSQYMGYGSSFRFVGDYLDMKPLDAMGR----RKTRIVAIDALDCPTK---LQYETSGLLREVNKAFVGFL 376
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: UPI001C9B14E8 (poly(ADP-ribose) glycohydrolase-like n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9B14E8) HSP 1 Score: 74.3 bits (181), Expect = 1.210e-12 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 10 LCPLRVEAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQ----PIPPSPSSSSPTPPQTISITCIDATKFPAKHSPLECTHASILRELRKAMAGFI 429 L PL + + + G G + ++FAN+++GGGVL FG VQEE+ + CPE++ M + ++ D EA+ + + R++K GY + + I +P +S + SI IDA F KH + + ++I REL KA GFI Sbjct: 324 LLPLHITSKGTIETEGA-GLLQMDFANKYVGGGVLGFGCVQEEIRFVICPELMVTMLVTEELDDTEALIVSGIERYSKYKGYSNSFKWLGDYIDETPRDNSGR--RLTSIVAIDALYF--KHPQSQFSISNITRELNKAYVGFI 462
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: UPI001F5FC7E5 (poly(ADP-ribose) glycohydrolase-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5FC7E5) HSP 1 Score: 74.3 bits (181), Expect = 1.210e-12 Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 1 Query: 61 EGAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQ----PIPPSPSSSSPTPPQTISITCIDATKFPAKHSPLECTHASILRELRKAMAGFI 429 G + V+FAN+ LGGGVLR+G VQEE+ + CPE++ M EA+ I+ RF+ GYG N + +P SS + SIT IDA F ++ ++ T ++I REL KA GF Sbjct: 385 RGMLQVDFANKRLGGGVLRWGCVQEEIRFVICPELIVSRLFTESMEPLEAVHIIGCERFSNYKGYGDNFEWSGDHCDTTPRDSSGR--RLCSITAIDALAF--RNPNMQYTPSNITRELNKAYVGFF 507
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Match: A0A6P5IBD4_BOMTE (Poly(ADP-ribose) glycohydrolase n=14 Tax=Bombus TaxID=28641 RepID=A0A6P5IBD4_BOMTE) HSP 1 Score: 73.9 bits (180), Expect = 1.640e-12 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 64 GAIGVNFANRFLGGGVLRFGAVQEEVLVLQCPEIVAVMTMMGKMTDAEAMQILNLRRFNKTSGYGKNIQ----PIPPSPSSSSPTPPQTISITCIDATKFPAKHSPLECTHASILRELRKAMAGFIQ 432 G + V+FANR++GGGVL G VQEE+ + CPE++ M + ++ D EA+ + + R++K GY + + + +P SS + SI IDA F HS + +I+REL KA GF++ Sbjct: 342 GFLQVDFANRYVGGGVLGLGCVQEEIRFVICPELMVTMLITEELDDTEALIVSGIERYSKYKGYSNSFKWMGDYVDETPKDSSGR--RLTSIVAIDALYF--THSEAQFNINNIIRELNKAYVGFVR 464 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100002.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100002.9.1 >prot_M-pyrifera_M_contig100002.9.1 ID=prot_M-pyrifera_M_contig100002.9.1|Name=mRNA_M-pyrifera_M_contig100002.9.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp STPLCPLRVEAGTEWDMFGVEGAIGVNFANRFLGGGVLRFGAVQEEVLVLback to top mRNA from alignment at M-pyrifera_M_contig100002:3..449+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100002.9.1 ID=mRNA_M-pyrifera_M_contig100002.9.1|Name=mRNA_M-pyrifera_M_contig100002.9.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig100002:3..449+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100002:3..449+ >mRNA_M-pyrifera_M_contig100002.9.1 ID=mRNA_M-pyrifera_M_contig100002.9.1|Name=mRNA_M-pyrifera_M_contig100002.9.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig100002:3..449+ (Macrocystis pyrifera P11B4 male)back to top |