mRNA_M-pyrifera_M_contig100416.87.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100416.87.1
Unique NamemRNA_M-pyrifera_M_contig100416.87.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: A0A5A8DTZ8_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTZ8_CAFRO)

HSP 1 Score: 154 bits (390), Expect = 2.310e-45
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRVARSALG 306
            WP++GNC+IFDE N VLDEI+SF+ED +  G +VLVHS DG SRA FC+ +YFMLKYRWTL KTL ++QSKR DL PRPGFMRQL AL+ SLQRV R+ALG
Sbjct:   55 WPQSGNCIIFDESNAVLDEIYSFIEDTLADGLSVLVHSTDGVSRACFCACIYFMLKYRWTLAKTLQYMQSKRPDLAPRPGFMRQLSALNDSLQRVTRAALG 155
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: A0A5A8DIH3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DIH3_CAFRO)

HSP 1 Score: 154 bits (390), Expect = 3.740e-45
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRVARSALG 306
            WP++GNC+IFDE N VLDEI+SF+ED +  G +VLVHS DG SRA FC+ +YFMLKYRWTL KTL ++QSKR DL PRPGFMRQL AL+ SLQRV R+ALG
Sbjct:   55 WPQSGNCIIFDESNAVLDEIYSFIEDTLADGLSVLVHSTDGVSRACFCACIYFMLKYRWTLAKTLQYMQSKRPDLAPRPGFMRQLSALNDSLQRVTRAALG 155
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: A0A0V0Q9Z0_PSEPJ (Uncharacterized protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0Q9Z0_PSEPJ)

HSP 1 Score: 96.3 bits (238), Expect = 3.480e-21
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRV 288
            W E  N V+FD +N  ++EI  FV +A E G +VLVHS+ G+SRA    A +FM+KY+WTL KTL FL S+R DL+ R  F  QL  L+  LQ++
Sbjct:   70 WVENDNQVLFDPRNETVNEILDFVNEAHEQGESVLVHSVRGQSRACCVLASFFMMKYKWTLYKTLEFLNSRRPDLEIRASFFHQLTQLEQKLQKM 164
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: A0A0V0QEJ5_PSEPJ (Uncharacterized protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QEJ5_PSEPJ)

HSP 1 Score: 95.9 bits (237), Expect = 6.420e-21
Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:    1 GWPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRVARSA 300
            GW E  N +IFD K+ VL   F F++D +  G AVL+HS+ G +R+    A Y M KYRWTL KTL FL ++R DL+ R  F  QL AL++ L ++   A
Sbjct:   60 GWLETDNQIIFDPKDEVLQRTFRFIDDTLNQGDAVLIHSVRGHNRSVCIIAAYLMRKYRWTLYKTLEFLHARRPDLEIRASFFNQLLALENRLSKLGLGA 159
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: Q24FC7_TETTS (Dual specificity phosphatase domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q24FC7_TETTS)

HSP 1 Score: 92.0 bits (227), Expect = 1.540e-19
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRVARSA 300
            W E  + ++FD+ +  L+EIF+F+E++VE G + LVHS+ G+SR+    A Y M K++WTL KTL FL ++R DL+ R  F  QL AL+  L R    A
Sbjct:   71 WMENDHQILFDDNDENLNEIFNFIEESVEQGESTLVHSVRGQSRSCCVLAAYLMKKFKWTLYKTLEFLNTRRPDLEIRASFFHQLTALEQKLYRQGEGA 169
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: J9HUD3_9SPIT (Dual specificity phosphatase, catalytic domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HUD3_9SPIT)

HSP 1 Score: 90.5 bits (223), Expect = 5.310e-19
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQ 282
            W +  N ++ D+K+   + IF F+E+A+E   +VLVHS+ G+SRA  C A Y M +YRW+L KTL FL S+R DL+ R  F+ QL A +  LQ
Sbjct:   62 WLDQDNQIVLDQKDEASNAIFEFIEEAIEQTESVLVHSVRGQSRATCCLAAYIMRRYRWSLLKTLEFLNSRRPDLEIRATFIHQLSAYEARLQ 154
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: A0A7S3ID03_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3ID03_9SPIT)

HSP 1 Score: 85.1 bits (209), Expect = 6.290e-19
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALD 270
            W +  N  IFD K+T    IF F+E+A++   +VLVHS+ G+SR++   A YFM KYRW++ KTL FL S+R DL+ R  F++QL+  +
Sbjct:   57 WMDLENQTIFDAKDTTTKAIFDFIENAIKKYESVLVHSVRGQSRSSSVLAAYFMRKYRWSMLKTLEFLNSRRPDLEIRGTFIQQLQQFE 145
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: J9HUE9_9SPIT (Dual specificity phosphatase, catalytic domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HUE9_9SPIT)

HSP 1 Score: 89.0 bits (219), Expect = 1.820e-18
Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRVARSALG 306
            W +  N V+FD+K+    EIF F+E AV+   +VLVHS+ G+SRAA   A Y M KYRW+L KTL FL S+R +L+ R  F++QL+  +   QR+ +  LG
Sbjct:  103 WMDQENQVLFDQKDQTSKEIFDFIESAVKKTESVLVHSVRGQSRAASVLAAYLMRKYRWSLLKTLEFLNSRRPELEIRGTFIQQLQEYE---QRLTKQGLG 200
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: A0A078AU18_STYLE (Dual specificity catalytic domain containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AU18_STYLE)

HSP 1 Score: 87.4 bits (215), Expect = 6.300e-18
Identity = 46/101 (45.54%), Postives = 66/101 (65.35%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRVARSALG 306
            W +  N ++FD+K+    EIF F+E AV+   +VLVHS+ G+SRAA   A Y M KYRW+L KTL FL S+R +L+ R  F++QL+  +   QR+ +  LG
Sbjct:   91 WMDQENQLLFDQKDQTTKEIFDFIESAVKKTESVLVHSVRGQSRAASVLAAYLMRKYRWSLLKTLEFLNSRRPELEIRGTFIQQLQDYE---QRLIKQGLG 188
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BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Match: A0A078BBJ2_STYLE (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078BBJ2_STYLE)

HSP 1 Score: 85.9 bits (211), Expect = 2.210e-17
Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 1 
Query:    4 WPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCSAVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQ 282
            W   G  ++ D K+   + IF F+E+AVE   +VLVHS+ G+SRA  C A Y M KYRW+L KTL FL S+R DL+ R  F+ QL A +  LQ
Sbjct:   59 WEPIG--IVLDVKDEASNAIFEFIEEAVEATESVLVHSVRGQSRATCCLAAYIMRKYRWSLLKTLEFLNSRRPDLEIRATFIHQLSAYEARLQ 149
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100416.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DTZ8_CAFRO2.310e-4570.30Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A5A8DIH3_CAFRO3.740e-4570.30Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A0V0Q9Z0_PSEPJ3.480e-2149.47Uncharacterized protein n=1 Tax=Pseudocohnilembus ... [more]
A0A0V0QEJ5_PSEPJ6.420e-2146.00Uncharacterized protein n=1 Tax=Pseudocohnilembus ... [more]
Q24FC7_TETTS1.540e-1944.44Dual specificity phosphatase domain protein n=1 Ta... [more]
J9HUD3_9SPIT5.310e-1946.24Dual specificity phosphatase, catalytic domain con... [more]
A0A7S3ID03_9SPIT6.290e-1946.07Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
J9HUE9_9SPIT1.820e-1846.53Dual specificity phosphatase, catalytic domain con... [more]
A0A078AU18_STYLE6.300e-1845.54Dual specificity catalytic domain containing prote... [more]
A0A078BBJ2_STYLE2.210e-1748.39Tyrosine-protein phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100416contigM-pyrifera_M_contig100416:1..309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.9
Seed ortholog evalue1.2e-17
Seed eggNOG ortholog2880.D7G780
Preferred nameDUSP22
KEGG koko:K04459,ko:K14165
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000188,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0002697,GO:0002698,GO:0002703,GO:0002704,GO:0002706,GO:0002707,GO:0002709,GO:0002710,GO:0002819,GO:0002820,GO:0002822,GO:0002823,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006469,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007399,GO:0008138,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0012501,GO:0014013,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0022008,GO:0022407,GO:0022408,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030155,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031401,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0033673,GO:0035335,GO:0036211,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0043086,GO:0043170,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043549,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045595,GO:0045685,GO:0045859,GO:0045892,GO:0045934,GO:0045936,GO:0045937,GO:0046328,GO:0046330,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048699,GO:0048713,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050776,GO:0050777,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050854,GO:0050856,GO:0050858,GO:0050860,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051253,GO:0051338,GO:0051348,GO:0051716,GO:0051960,GO:0060255,GO:0060284,GO:0065007,GO:0065009,GO:0070302,GO:0070304,GO:0070372,GO:0070374,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071900,GO:0071901,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0140096,GO:1901564,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1903037,GO:1903038,GO:1903506,GO:1903507,GO:2000026,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.phosphatase
EggNOG OGsCOG2453@1,KOG1716@2759
EC3.1.3.16,3.1.3.48
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons1
Model size309
Cds size309
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.183315-CDS-M-pyrifera_M_contig100416:0..3091622815500.183315-CDS-M-pyrifera_M_contig100416:0..309Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100416 1..309 +
1692277439.4612195-CDS-M-pyrifera_M_contig100416:0..3091692277439.4612195-CDS-M-pyrifera_M_contig100416:0..309Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100416 1..309 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100416.87.1prot_M-pyrifera_M_contig100416.87.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100416 1..309 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100416.87.1

>prot_M-pyrifera_M_contig100416.87.1 ID=prot_M-pyrifera_M_contig100416.87.1|Name=mRNA_M-pyrifera_M_contig100416.87.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
GWPEAGNCVIFDEKNTVLDEIFSFVEDAVEHGGAVLVHSIDGRSRAAFCS
AVYFMLKYRWTLGKTLTFLQSKRADLQPRPGFMRQLRALDHSLQRVARSA
LGS
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mRNA from alignment at M-pyrifera_M_contig100416:1..309+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100416.87.1 ID=mRNA_M-pyrifera_M_contig100416.87.1|Name=mRNA_M-pyrifera_M_contig100416.87.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig100416:1..309+ (Macrocystis pyrifera P11B4 male)
GGGTGGCCTGAAGCCGGCAATTGTGTAATTTTCGACGAGAAGAACACGGT
ATTGGACGAGATTTTCTCGTTCGTGGAGGACGCGGTGGAGCACGGAGGCG
CAGTGCTGGTGCACAGCATCGACGGCCGCTCGAGGGCGGCGTTTTGCAGC
GCTGTCTATTTCATGCTCAAGTACCGGTGGACTCTGGGCAAGACGTTGAC
ATTTCTGCAGTCGAAGCGCGCCGACTTGCAGCCTCGTCCCGGGTTCATGC
GACAGTTGCGGGCGTTGGACCATTCTCTGCAGCGAGTGGCACGCTCTGCG
CTGGGGAGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100416:1..309+

>mRNA_M-pyrifera_M_contig100416.87.1 ID=mRNA_M-pyrifera_M_contig100416.87.1|Name=mRNA_M-pyrifera_M_contig100416.87.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig100416:1..309+ (Macrocystis pyrifera P11B4 male)
GGGTGGCCTGAAGCCGGCAATTGTGTAATTTTCGACGAGAAGAACACGGT
ATTGGACGAGATTTTCTCGTTCGTGGAGGACGCGGTGGAGCACGGAGGCG
CAGTGCTGGTGCACAGCATCGACGGCCGCTCGAGGGCGGCGTTTTGCAGC
GCTGTCTATTTCATGCTCAAGTACCGGTGGACTCTGGGCAAGACGTTGAC
ATTTCTGCAGTCGAAGCGCGCCGACTTGCAGCCTCGTCCCGGGTTCATGC
GACAGTTGCGGGCGTTGGACCATTCTCTGCAGCGAGTGGCACGCTCTGCG
CTGGGGAGTGGGTGGCCTGAAGCCGGCAATTGTGTAATTTTCGACGAGAA
GAACACGGTATTGGACGAGATTTTCTCGTTCGTGGAGGACGCGGTGGAGC
ACGGAGGCGCAGTGCTGGTGCACAGCATCGACGGCCGCTCGAGGGCGGCG
TTTTGCAGCGCTGTCTATTTCATGCTCAAGTACCGGTGGACTCTGGGCAA
GACGTTGACATTTCTGCAGTCGAAGCGCGCCGACTTGCAGCCTCGTCCCG
GGTTCATGCGACAGTTGCGGGCGTTGGACCATTCTCTGCAGCGAGTGGCA
CGCTCTGCGCTGGGGAGT
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