mRNA_M-pyrifera_M_contig10404.858.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10404.858.1
Unique NamemRNA_M-pyrifera_M_contig10404.858.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: D8LCI3_ECTSI (Calcium-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI3_ECTSI)

HSP 1 Score: 562 bits (1449), Expect = 4.060e-191
Identity = 324/488 (66.39%), Postives = 353/488 (72.34%), Query Frame = 1 
Query:    1 QLQDGELGTAAMGCVVRAALKKRTGEMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARSYTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWLKRFAPGGTSPRNSSKVSASSAAVLPSP-SASLRLAFSGGGSGTVGSEAVKLLHVXXXXXXXXXESATSGVGGKVGAGVDEVEWVDGEKDAPLPLPQQQSA------------------------------------EAEGEPFREEASIKVRMLSSMRDYRSYGALRRTALMVVAYNHKPERLRELRDEFAEFDTESNGKISRNEMQAALAQRGVAHEEIEELFKSLDLVRS 1353
            ++Q GELGTAAMGCVVRA LKKRTGEMFACKTFMVSSVPKKKAQ+RILETLRNEIDLLRSLDHPNIVRAYESYEVG+DLHLVMELC GGDL AR+YTE QAA VV+Q+LSAI H+H +GICHRDLKFENILWESKA DAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLI+GEPPFECENEVDTMRRLLAV Y+WP+GS VSSEAK   YNLLKFDPRRRWTV+EAIASPW+KRFAPGG         S  + AV  SP + +   AFS   S  V          XXXXXXXXX                                                                         +A GE   +EA I VRMLSSMRDYRSYGALRRTALMVVAYN  P++LRELR+EF +FDTE NGKISR EM+ AL+QRGV+ EEIEELF+SLD+ +S
Sbjct:  130 EVQPGELGTAAMGCVVRAGLKKRTGEMFACKTFMVSSVPKKKAQRRILETLRNEIDLLRSLDHPNIVRAYESYEVGQDLHLVMELCRGGDLGARTYTEAQAAAVVRQVLSAILHAHQKGICHRDLKFENILWESKAEDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLIAGEPPFECENEVDTMRRLLAVQYYWPIGSKVSSEAKGLCYNLLKFDPRRRWTVEEAIASPWIKRFAPGGPD------ASPPATAVARSPRNVNASSAFSSSNSRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALGE-MPQEAPISVRMLSSMRDYRSYGALRRTALMVVAYNQSPDKLRELRNEFVDFDTERNGKISRGEMRTALSQRGVSPEEIEELFESLDVDQS 610
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A6H5JEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE6_9PHAE)

HSP 1 Score: 555 bits (1431), Expect = 1.610e-189
Identity = 318/478 (66.53%), Postives = 348/478 (72.80%), Query Frame = 1 
Query:    1 QLQDGELGTAAMGCVVRAALKKRTGEMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARSYTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWLKRFAPGGT-----------SPRNSSKVSASSAAVLPSPSASLRLAFSGGGSGTVGSEAVKLLHVXXXXXXXXXESATSGVGGKVGAGVDEVEWVDGEKDAPLPLPQQQSAE----------------AEGEPFREEASIKVRMLSSMRDYRSYGALRRTALMVVAYNHKPERLRELRDEFAEFDTESNGKISRNEMQAALAQRGVAHEEIEELFKSLDLVRS 1353
            ++Q GELGTAAMGCVVRA LKKRTGEMFACKTFMVS+VPKKKAQ+ ILETLRNEIDLLRSLDHPNIVRAYESYEVG+DLHLVMELC GGDL AR+YTE QAA VV+Q+LSAI H+H +GICHRDLKFENILWES+A DAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLI+GEPPFEC+NEVDTMRRLLAV Y+WP+GS VSSEAK F YNLLKFDPRRRWTV+EAIASPW+KRFAPGG            SPRN +  SA S+                                XXXXXXXXX                                                      A GE   +EA I VRMLSSMRDYRSYGALRRTALMVVAYN  P++LRELR+EF +FDTE NGKISR EM+ AL+QRGV+ EEIEELF+SLD+ +S
Sbjct:   66 EVQPGELGTAAMGCVVRAGLKKRTGEMFACKTFMVSNVPKKKAQRHILETLRNEIDLLRSLDHPNIVRAYESYEVGQDLHLVMELCRGGDLGARTYTEAQAAAVVRQVLSAILHAHQKGICHRDLKFENILWESEAEDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLIAGEPPFECDNEVDTMRRLLAVQYYWPIGSKVSSEAKGFCYNLLKFDPRRRWTVEEAIASPWIKRFAPGGPDASPPATAVVRSPRNVNASSAFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGE-MPQEAPISVRMLSSMRDYRSYGALRRTALMVVAYNQSPDKLRELRNEFVDFDTERNGKISRGEMRTALSQRGVSPEEIEELFESLDVDQS 542
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A835Z9R7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R7_9STRA)

HSP 1 Score: 341 bits (875), Expect = 2.290e-108
Identity = 169/273 (61.90%), Postives = 204/273 (74.73%), Query Frame = 1 
Query:   16 ELGTAAMGCVVRAALKKRTGEMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARS-YTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWES--KAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWLKRFAPG---GTSPRNSSKV 816
            ELG+A MGC+VR   KK TGEMFACK+F + SVP KK Q +I   LRNEI+LLRSLDHPN+VRAYE  E G  +HL+MELC GGDL  R  YTE QAA ++ ++L AI + H  G+CHRDLKFEN+LWE+  +  D + KLIDFGMS +F  G  M+ERVGTVYTMAPEVL+GEYT+QAD+WS+GC+ F LI+GEP FECE E DTM +L  V+Y WP G  VSSEAK FVY LLKFDP  R T QEA+ASPWL++   G   G+  R+SS +
Sbjct:   70 ELGSAGMGCIVRTVRKKATGEMFACKSFNMQSVPDKKVQVKIRNMLRNEIELLRSLDHPNVVRAYERIESGGCIHLIMELCEGGDLTRREPYTEAQAAVIICKVLRAIVYCHRHGVCHRDLKFENVLWEAPGRGADGEPKLIDFGMSRKFARGAYMRERVGTVYTMAPEVLRGEYTEQADVWSIGCMAFQLIAGEPAFECETEADTMVKLQTVTYSWPRGMAVSSEAKEFVYKLLKFDPTMRMTAQEALASPWLRKHCSGSKVGSPGRDSSML 342
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A6V1R4A6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R4A6_HETAK)

HSP 1 Score: 299 bits (765), Expect = 3.700e-92
Identity = 174/446 (39.01%), Postives = 247/446 (55.38%), Query Frame = 1 
Query:    4 LQDGELGTAAMGCVVRAALKKRTGEMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARSYTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWLKRFAPGGTSPRNSSKVSASSAAVLPSPSASLRLAFSGGGSGTVGSEAVKLLHVXXXXXXXXXESATSGVGGKVGAGVDEVEWVDGEKDAPLPLPQQQSAEAEGEPFREEASIKVRMLSSMRDYRSYGALRRTALMVVAYNHKPERLRELRDEFAEFDTESNGKISRNEMQAALAQRGVAHEEIEELFKSLD 1341
            ++D ELG AAMGC VR  +KK+TG+ +A K+F++ +  K KA+KR+ + LR EIDLLRSLDHPNI+R Y++YE   + HLVMELC G DL  R + + +A EVV+++ + I + H RG+CHRDLK ENIL+++     +IKLIDFGMS RF EG+ M ER+GT Y MAPEVL GEYT++ D+WS+G IT+ +++G  PF  + + + +  +L++ + WP    V  +AK FV  LLK  P +RW+   A+ + WL          R     + S   +  +   S RL+  G   GT+  + +                                                        P +   S    M+ +MR+Y  YG  +RTALM++AY   P +LR LR  F  FDTE NG ISR E+  AL    V  EEIE+ ++S+D
Sbjct:   46 IEDTELGRAAMGCTVRGLVKKKTGQRYAVKSFVLQN--KSKAEKRVRQMLRTEIDLLRSLDHPNIIRPYQTYESDTEFHLVMELCTGLDLGDRCFRDWKAREVVRKLCNVIAYCHSRGVCHRDLKTENILFDTPDEGGEIKLIDFGMSRRFVEGLAMSERLGTPYCMAPEVLSGEYTEKCDMWSIGVITYRMLTGRNPFNGKTDGEIIENMLSLKWGWPPKPKVHPDAKQFVGGLLKLRPNQRWSANRALLAKWLTA---NPYEERQGLTPAESLERLYLTKKPSRRLSNLGLHKGTIWEQRLT-------------------------------------------------------PSK---SFSNSMVKAMRNYSEYGLFQRTALMMLAYELSPAKLRALRHAFVSFDTEMNGVISRQELSDALRTMKVPEEEIEKFYQSMD 428
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A7S1XUW5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUW5_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.350e-73
Identity = 124/261 (47.51%), Postives = 179/261 (68.58%), Query Frame = 1 
Query:    1 QLQDGELGTAAMGCV-VRAALKKRTGEMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYE-VGRD-LHLVMELCNGGDLNARSYTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWLKR 774
            +  DG LG      V VR    K TG+ FACKTF+   +  +  ++  +E+LR E+ LL +LDHPNI+R + +YE V ++  H++MELC GGDLN R ++E +AA ++ +IL+AI + H R I HRD+K ENIL+++   DA++KLIDFGMS RF +G  M E++GTVYT+APEVL GEY+++ D+WS+G + F +++GE PFE   E  T+  L A  Y WP   + S+EA+ FVY+LLK DP RRW+   A+ SP++K+
Sbjct:  131 EFADGTLGVTGFDYVSVRKVKSKATGKFFACKTFLFE-LQSRAERRESMESLRTEVQLLSTLDHPNIIRPFATYEDVEKNAFHIIMELCGGGDLNGREFSEQEAARIIYKILNAIVYCHSRSIVHRDIKTENILFDAVEGDAEVKLIDFGMSRRFVKGEGMHEQIGTVYTVAPEVLVGEYSEKCDMWSIGVVAFIMLTGESPFEGPTEQATVDNLCAARYAWPRDCSASAEAREFVYHLLKVDPYRRWSATRALISPFIKK 390
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A7S3XSE4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSE4_HETAK)

HSP 1 Score: 227 bits (578), Expect = 7.100e-65
Identity = 158/451 (35.03%), Postives = 233/451 (51.66%), Query Frame = 1 
Query:   10 DGELGTAAMGCVVRAALKKRTGEMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARS-YTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFW--PMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWLKRFAPGGTSPRNSSKVSASSAAVLPSPSASL-----RLAFSGGGSGTVGSEAVKLLHVXXXXXXXXXESATSGVGGKVGAGVDEVEWVDGEKDAPLPLPQQQSAEAEGEPFREEASIKVRMLSSMRDYRSYGALRRTALMVVAYNHKPERLRELRDEFAEFDTESNGKISRNEMQAALAQ--RGVAHEEIEELFK 1332
            D  LG  +MG  +RA  KK  G+M+A KT  +S +         L  LRNEIDLLRSLDHPNI+R  E ++  R ++L++ELC GGDL  R  YTE +A  +  Q+ SAI + H  G+ HRDLKFENI++ SK+ +A+IK+IDFG+S+++  G  +K  VGT+Y+MAPEV++G   + +D WS+G I F L+S + PF  ++E   + ++ A +Y +  P    VS EAK FV  L+      R    +A+   WL+ F+             A  A  LP+PSAS      R    GGG G V                            K G                   P   S +A  E           +++SM+ + +YG LR+ ALMVVA+    ++L+ L   F+  D  +NG+IS  E++ AL +    +  +++++LFK
Sbjct:   55 DRLLGEGSMG-TIRAVKKKSNGQMYALKTIQLSRI-----SPAFLAELRNEIDLLRSLDHPNIIRPLEVFDTKRRINLILELCAGGDLYTRHPYTEEEACSIALQLTSAIAYCHANGVVHRDLKFENIMFASKSKEAKIKVIDFGLSSKYAPGHVLKGSVGTLYSMAPEVIEGASDEASDNWSIGVIAFMLLSSQMPFFGKDERTVIMKIQACAYAFRGPRWKGVSEEAKDFVKRLIVKSKTERMRAADALNHTWLRAFS------------DARDARELPTPSASAASNSSRKRLEGGGGGEV----------------------------KFGG------------------PGDSSRDAISE-----------LVASMKQFGTYGKLRKAALMVVAHQCDADQLQALSAAFSRIDKANNGQISLEELKGALKECDNPLTDQDVDQLFK 430
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A7S4N7F1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7F1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 7.540e-63
Identity = 106/229 (46.29%), Postives = 157/229 (68.56%), Query Frame = 1 
Query:   91 KTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARS-YTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFW--PMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWL 768
            K++ + ++   +     +E LRNEID+LR+LDHPNIV+A+E +E  R +++VME C+GGDL AR+ Y+E + A++V ++LSA+ + H   +CHRDLKFENI++E+K  +A+IK+IDFG+S +F  G  M E VGT+YTMAP+VLQG YT QADLWS+G I + L+S   PF        + +++   + +  P    VS EAK FV  L+K DP++R T ++A+   WL
Sbjct:   97 KSYALKTIQLNRITDEFIEELRNEIDILRTLDHPNIVKAFEVFENKRQIYIVMESCDGGDLYARNPYSEKETAKIVGKVLSAVAYMHATNVCHRDLKFENIMFENKKKNAEIKVIDFGLSKKFISGKKMSEGVGTIYTMAPQVLQGVYTSQADLWSIGVIAYMLLSSSKPFYARKRRYMIDKIMRCDFKFHGPGWKHVSEEAKNFVSALIKLDPKKRLTAEQALDHKWL 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A7S4JP85_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JP85_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.260e-61
Identity = 106/229 (46.29%), Postives = 157/229 (68.56%), Query Frame = 1 
Query:   91 KTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARS-YTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLAVSYFW--PMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWL 768
            K++ + ++   +     +E LRNEID+LR+LDHPNIV+A+E +E  R +++VME C+GGDL AR+ Y+E + A++V ++LSA+ + H   +CHRDLKFENI++E+K  +A+IK+IDFG+S +F  G  M E VGT+YTMAP+VLQG YT QADLWS+G I + L+S   PF        + +++   + +  P    VS EAK FV  L+K DP++R T ++A+   WL
Sbjct:   97 KSYALKTIQLNRITDEFIEELRNEIDILRTLDHPNIVKAFEVFENKRQIYIVMESCDGGDLYARNPYSEKETAKIVGKVLSAVAYMHATNVCHRDLKFENIMFENKKKNAEIKVIDFGLSKKFISGKKMSEGVGTIYTMAPQVLQGVYTSQADLWSIGVIAYMLLSSSKPFYARKRRYMIDKIMRCDFKFHGPGWKHVSEEAKNFVSALIKLDPKKRLTAEQALDHKWL 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A7S2M5B7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5B7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 5.770e-60
Identity = 118/249 (47.39%), Postives = 161/249 (64.66%), Query Frame = 1 
Query:   76 EMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNAR-SYTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECE-NEVDTMRRLLAVSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWLKR--FAPGGTSPRNSS 810
            EM+A K+  +  V     QK  L+ LRNEI +LRSLDHPNIV+AYE YE   ++++VME C+GGDL AR  Y E QAA ++ Q+ SAI + HD GI HRD+K ENI++ES  P A+IKL+DFG+S ++  GM M +  GTVYTM+P+VL+G YT +AD WS+G I F L+  E PF  + +E+ +  +    ++  P    VS +AK FV  LL  DP++R +  EA+   WLK+  FA   T   N S
Sbjct:  125 EMYALKSIQLRLV-----QKEYLDELRNEISVLRSLDHPNIVKAYEVYETKHNIYVVMEYCSGGDLYARVPYAESQAANIITQLCSAIGNMHDNGITHRDIKMENIMFESSDPMAKIKLLDFGLSKKYLPGMYMSDWCGTVYTMSPQVLEGVYTNKADCWSIGVIAFLLLCNEKPFRGKRSEMLSKIKHCDFTFNNPGWCNVSKDAKRFVAALLTKDPKKRLSADEALQHSWLKKKDFASVSTKELNES 368
[Close]
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Match: A0A6S8UYP2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8UYP2_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.000e-59
Identity = 109/243 (44.86%), Postives = 160/243 (65.84%), Query Frame = 1 
Query:   52 AALKKRTGEMFACKTFMVSSVPKKKAQKRILETLRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNAR-SYTEPQAAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSARFQ-EGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPFECENEVDTMRRLLA--VSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEAIASPWL 768
            + +K    +++A K+ ++S V         +E LRNEI +L SLDHPNIV+AYE YE   +++L+++ C+GGDL +R  Y+E   A++  +++SA+ H H   + HRD+KFENI++ESK PDA+IKLIDFG+S R+  E   M + VGT+YTMAP+VLQGEYT QADLWS+G +T+ L+S   PF  +     + ++L    S++  M  ++S E+K FV  LL  DP RR T  +A+   WL
Sbjct:   95 SVIKSANSKLYALKSIILSRV-----SDDFIEELRNEISILASLDHPNIVKAYEVYETNVNIYLLLQNCSGGDLYSRIPYSEKACAKIASKLMSALSHMHKHNVTHRDIKFENIMFESKDPDAEIKLIDFGLSRRYSPENKYMNDGVGTIYTMAPQVLQGEYTSQADLWSIGVVTYMLLSNTKPFYGKKRRHVVAKILQGNFSFYSKMWRSLSDESKKFVRALLCVDPSRRLTADQALEHRWL 332
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10404.858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCI3_ECTSI4.060e-19166.39Calcium-dependent protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5JEE6_9PHAE1.610e-18966.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z9R7_9STRA2.290e-10861.90Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6V1R4A6_HETAK3.700e-9239.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XUW5_9STRA1.350e-7347.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XSE4_HETAK7.100e-6535.03Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4N7F1_9STRA7.540e-6346.29Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4JP85_9STRA1.260e-6146.29Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2M5B7_9STRA5.770e-6047.39Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A6S8UYP2_9STRA1.000e-5944.86Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10404contigM-pyrifera_M_contig10404:2232..10133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score216.1
Seed ortholog evalue3.4e-53
Seed eggNOG ortholog2850.Phatr21006
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
EggNOG free text desc.EF-hand domain pair
EggNOG OGs2XEB3@2836,KOG0032@1,KOG0032@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons7
Model size1356
Cds size1356
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.5165975-CDS-M-pyrifera_M_contig10404:2231..23111622815546.5165975-CDS-M-pyrifera_M_contig10404:2231..2311Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 2232..2311 +
1692277457.9583337-CDS-M-pyrifera_M_contig10404:2231..23111692277457.9583337-CDS-M-pyrifera_M_contig10404:2231..2311Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 2232..2311 +
1622815546.534603-CDS-M-pyrifera_M_contig10404:4555..47431622815546.534603-CDS-M-pyrifera_M_contig10404:4555..4743Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 4556..4743 +
1692277457.9723217-CDS-M-pyrifera_M_contig10404:4555..47431692277457.9723217-CDS-M-pyrifera_M_contig10404:4555..4743Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 4556..4743 +
1622815546.550676-CDS-M-pyrifera_M_contig10404:5303..54611622815546.550676-CDS-M-pyrifera_M_contig10404:5303..5461Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 5304..5461 +
1692277457.9824774-CDS-M-pyrifera_M_contig10404:5303..54611692277457.9824774-CDS-M-pyrifera_M_contig10404:5303..5461Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 5304..5461 +
1622815546.5683742-CDS-M-pyrifera_M_contig10404:6093..62071622815546.5683742-CDS-M-pyrifera_M_contig10404:6093..6207Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 6094..6207 +
1692277457.9917717-CDS-M-pyrifera_M_contig10404:6093..62071692277457.9917717-CDS-M-pyrifera_M_contig10404:6093..6207Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 6094..6207 +
1622815546.582245-CDS-M-pyrifera_M_contig10404:7944..80841622815546.582245-CDS-M-pyrifera_M_contig10404:7944..8084Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 7945..8084 +
1692277458.001513-CDS-M-pyrifera_M_contig10404:7944..80841692277458.001513-CDS-M-pyrifera_M_contig10404:7944..8084Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 7945..8084 +
1622815546.5951793-CDS-M-pyrifera_M_contig10404:8762..93241622815546.5951793-CDS-M-pyrifera_M_contig10404:8762..9324Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 8763..9324 +
1692277458.011072-CDS-M-pyrifera_M_contig10404:8762..93241692277458.011072-CDS-M-pyrifera_M_contig10404:8762..9324Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 8763..9324 +
1622815546.6081152-CDS-M-pyrifera_M_contig10404:10019..101331622815546.6081152-CDS-M-pyrifera_M_contig10404:10019..10133Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 10020..10133 +
1692277458.0212886-CDS-M-pyrifera_M_contig10404:10019..101331692277458.0212886-CDS-M-pyrifera_M_contig10404:10019..10133Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10404 10020..10133 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10404.858.1prot_M-pyrifera_M_contig10404.858.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10404 2232..10133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10404.858.1

>prot_M-pyrifera_M_contig10404.858.1 ID=prot_M-pyrifera_M_contig10404.858.1|Name=mRNA_M-pyrifera_M_contig10404.858.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=452bp
QLQDGELGTAAMGCVVRAALKKRTGEMFACKTFMVSSVPKKKAQKRILET
LRNEIDLLRSLDHPNIVRAYESYEVGRDLHLVMELCNGGDLNARSYTEPQ
AAEVVKQILSAIRHSHDRGICHRDLKFENILWESKAPDAQIKLIDFGMSA
RFQEGMPMKERVGTVYTMAPEVLQGEYTKQADLWSVGCITFHLISGEPPF
ECENEVDTMRRLLAVSYFWPMGSTVSSEAKAFVYNLLKFDPRRRWTVQEA
IASPWLKRFAPGGTSPRNSSKVSASSAAVLPSPSASLRLAFSGGGSGTVG
SEAVKLLHVGGSSASVGGESATSGVGGKVGAGVDEVEWVDGEKDAPLPLP
QQQSAEAEGEPFREEASIKVRMLSSMRDYRSYGALRRTALMVVAYNHKPE
RLRELRDEFAEFDTESNGKISRNEMQAALAQRGVAHEEIEELFKSLDLVR
S*
back to top

mRNA from alignment at M-pyrifera_M_contig10404:2232..10133+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10404.858.1 ID=mRNA_M-pyrifera_M_contig10404.858.1|Name=mRNA_M-pyrifera_M_contig10404.858.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7902bp|location=Sequence derived from alignment at M-pyrifera_M_contig10404:2232..10133+ (Macrocystis pyrifera P11B4 male)
CAGCTGCAAGATGGAGAGCTCGGCACGGCCGCGATGGGTTGTGTCGTGCG
AGCAGCGCTCAAAAAACGAACGGGCGAAATGTGAGAAACTGTTGAATTGA
TACTGGTACGTACCATTCTGGCCGCGAATATAGTCCCCGTCTGGACTCTG
ATATGAACATCAAACATAGCTTATATTCACAGCCAGATCGGTGTACATGT
TGCGTTACGTCCGTAGAATTGCCCCCCACGTATTTGGGGGGGGCGGGGAC
AAACTACTTGGAATTTAGCGTGATATAAAAATGGAAAGTAGCGAAAGGGT
CAAAAGACGTTTAAGACACGCAAGAAAAGACTTTTCTTCCATTTTTTTTT
TTTTATGTACAGCTTGAGACGGAAAAAAAAGTGAGCAACACCATGAATGT
TGACGGCTACCGGTACAGCAGTATCGGGCCGCATCAAGCAGCAACCCCTC
TTGCTGTGCTGCTGGGATGTGTCACCAGTGTCCCAAGTGTCCGAACCAAA
CTGCAAGCGGTTGGTCGTATCCGTCAAGTGCGCGACAACAAACTGCTCGT
GATGCTGCGCCCTATATGATGACGGTACTTCTATGGGTAGAAGGCGGGTA
AGCAGTAAAGAGGAGGGCAGAGCTTACCACTTGCTTCGATAAAATGGTTG
GCACACCGCTTGTGAGGAACCGACTACTGTACCGCTAGCCCGAAATCCTG
AGCCAATGTAGATCACACCCGATCGACCGATCCATGGTTACCGCAGTAGT
CCCTCTGTCTCGTACCTCGTACCAGTACCCGGGTATGTGGACAACCGTTT
TTGTCGAATACGCGGTAAGCTCTGCTGGATGACGCCGATATCGTTACTAG
GTGCCCATACCCGCAAGCTCTCGTGCTGGACGAGGAGTTCATAAGCTGAT
ACTACGTTAGGGTACCTAGTTATTGCTCGGGGGTTTTATGACAGCAGTGT
ATGTGCGTCAGCGCTAGTGGTCCTTCTGTAAGCGCCGGTATGCGCCAATC
AACAGCACCGGCACTATGGCGGCAAACCAACCGGCGCTAATTACTCCGCA
CACTTGCCACGCCGGTTGATCCCATCTGTGGCAAGCGATTTCGCCGGCGT
TAAATCGGACACCGGGCGTCTCAGAGGGACGCCCACTCCGTACCTGTTTC
CGTTGCTTGCCACCCGCGCACCAACCCACACACCCACCCACCCCGCCCGC
CCGCCCGCCCGCCCACCCGCCTGGCGCCTCGTATACAACTCGTAGCAGGG
TGAAGGGCACACTCTATTTGTGTTTTTATCACCGGGTGTGCAAAAATATA
TTTTTTATCTCTGTACACTGTTACTCCTATGCTGTTTTTGGTGTCGGCTT
TTTTTTCTTTTGCAGGGGTTATACGTGTCTTGCAACCCAAAGTTATCCGC
GAAACCCCCGACGGATTCACACTCAAAATCAATGTTGTGTTAATTTTTTT
TGTTGATTGCACCTCGCGAGCCATCCGGGGTGTGCTGCGGAGTTTCGGTT
TGTGCAGACCCGGTTTGCGATTACTTGCGGTAGTTTTTTCGCCTCGAGTG
CAGGCTTTCTCCGTGGCAGGCTTTTCTTTGCACTCTTGTATGTGTAGCTG
CGCGACGTAAGGGCGACCGAACATTCGAAAGTCCTTTCCAATTTTTACTC
TTTTTTTTTTCGCTTTGACCGTTCCGTTCTGTTCTTCAATTGTTCAAATA
TCGTGCGGGATACACAACACAACATCGAAAAATGGTGCGGGGTTCTCCAG
CGATATTGAGAATTTCTCAGTTGAGCGGTCCTGTCGGTCAGGCGCATATT
TTTTGTTTTTCTTCATTTTTGTTTTCTTCTCCTTCCCCCATTCCATTTGT
AAGCTTCGCCCTTCTTTTCTCTCTCCTTCCTATTACGGGGGACCGTAGAA
GATAGGACCTACGGTACACACAAAAACCTATATATTTACCTATTTTTACT
AACAGAATTTGGTCCTATCAAATATGGTTCCCCGTAATAGTCGTTACTCA
GATCCGGGGTCACAAAGTAGGCTCTTCTCACCCCTCTTGCCTGACATTTT
TAACCCGAGAAGACTTCGGTCCTTTCTTCCTTCGTTCGACTCGCCTCGAA
TTACACACAGGCACAACTATACCAACTATACGCGCACAAAAGTGAGGTTG
GTGTATGCTGCGTATAGCTACTGTAATTAGTTCAGTAGCTGTTGTGTCAC
GGGGAGGAGGGGGGGGATTGGTGACTGGTTTACCTCTTGAGGGGTCGGTT
GGTGACATTTTTTTTTCGGGACTCGGGCAGAACCAAAAAAATAAACACGG
CCTCCACACAATTTCCGTATTCAGGTTCGCGTGCAAGACGTTCATGGTCA
GCAGCGTCCCGAAGAAGAAAGCACAGAAACGGATTCTGGAAACCCTTAGG
AACGAGATCGACCTCCTACGTAGCCTGGACCACCCCAACATCGTCCGCGC
GTACGAGTCTTACGAGGTCGGGCGGGACCTACACCTCGTCATGGAGCTTT
GCAACGGGGGAGGTGAGCGTTGTTTATACGGGGGTCCACAGTCGCAGCAG
CAGCAGCGACTGCAGCAGCAGCAGTAGTCGTTGTGGCAGCAGCAACAGCT
CGAGTTGTAGCTGCGGCAGCAATCCTCGGAGCAACAACGGCGATAATCCT
CGTAGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCCTCG
TATAGCAGCAACAGCAGTCCTCTTACCATAGAATAAGCCGCACCTCATAG
TAGCTGCAGCGCAACACCATTCCCCCCCCCCCCTCCTTATCGCCGCCTTC
CTGACCATCAGTCCCCTGTGTCCCGCATCCGCCACATCTTGACCCGCGCC
CTCTGTCGCCTCTGCTGCTGGCACCGTTCTTCGGTCTCTCTGCATGTATG
ACATGAGTACACCCCCCCTCCTCCCCCACCTTTTCCTCCGCTCCTGTGTG
TTTGTTGCGGTTTGTTTCGAATTTTTTTTCCTGTCCGCCTTCGTTTCCAT
CCATTTGCCCGTCCTGTCTGTCTGTCTGTCTATCTGCGTGTATGCCTCGG
GTATGTTTCCGTCTCCAAAAAGACCTGAACGCGAGGTCGTACACGGAGCC
TCAGGCGGCGGAGGTGGTGAAGCAGATATTGTCGGCGATCAGGCACTCTC
ACGACAGGGGCATCTGCCACCGGGACCTCAAGTTCGAGAATATTCTGTGG
GAGTCCAAGGCCCCCGACGCCCAGATAAAGGTCAGAGAACGGAGGGACAA
TATCAGGGGGGTTTAAGTCGGCATCCACCGGTCGCGTAGAGCCCGATAAG
CGTGCAGCCGTCGCGCCTCCCCCTATCGCAGACGGTCTCCTCAAAGGGAG
GCGTGTTTTTGTGTTGGTGCGGGTGCTTGTTGCGTCATCTCTATGGAAAT
ATATTATTCATAGTGCGGCGCTACGTCTCTCTCTCTTTCTCTGGCCCTCT
CTCGTCAGATTTGCGTCGACAATATGTTTTACGCTTCTACTGCTATGCTG
GTGGCCGCAAAGCGTGTGTGTGTTTTTTTTTTCTTGTTTTCTCCCAGATA
TATATATATATATATATATTTTCCGAGTATTGTATATACGGTGTCTCTTT
TAGTTTTTGACTTGGACAACCCCGGGCGACTGTAATGAAGCAGTGTGAGT
ATCGCAGTAGATGTGATTGACGAGTACACGCGGGACCAGCGGCAAACACC
TAAAAACAGTACGTACAACTAACAGCACGTTTTTTTGTCGTCTAAAGTCC
GTTTTTTTTTCGCTCCTGTCCGTGACTCGTGCCGGTGCGCTCCGTCGTGT
GCGTGTTTGCGTGCGAACGAACGAACGAACGAACGAACCTTAACCGGATC
GAAAAACCGCAGCTGATCGACTTCGGTATGTCGGCTCGGTTCCAAGAAGG
GATGCCGATGAAGGAGCGCGTCGGGACGGTGTACACCATGGCGCCGGAGG
TCCTGCAGGGAGAGTACACCAAGCAGGTACCTGGGGTGTAGATGTACCCG
TGTAGCACGCAAGATGTCGCATTCCCAATTTCGGGGGACCACAGTAAGTG
GGACCTGCGATACACACGACGACCTATATATTTCCTGTTTTTCAAACAAT
ATTTGGTCCTATTTACTATGGCCCCCCGTAATAGGATATAATATTTTGCA
GTATGATTTTCTCGATGACAGGGAGAGCGCAAACGCTGAGCGTTGCGCCT
ACGTACGGAGTTGATTGCCTCGTGGGTATGTTATCTCGCGTGCTATTACT
GTATATTTTTTGCTTCGGTTACTTCTAGGGCTGTGCTGCTGCATCGTCTG
TGCCGGCAGGGTGGGGGGGTTAACGATTTTTTTCTCGCCGACGGCAAAGT
CTGTCTCTTTTTCCGCCCCCCCCCCCCCGCTCCCTCCGATACGAAAGGAG
AAAAGGGACAGGCAGTGAAGCTGGCGTGACAGGTAAGCAGGCGCGGTTGA
ATGCCGCAGGCAGGGCCGACTCTCCCCCCCCCCCGCCTTCGCCATCTCAC
ATCATAGACCCTCGCGAAGCAACCCCATGTACGCTAGTGCGCATTCGCTA
GTATCCACCACGAATACGAACGCCTCACCAGCGACATCACTAGCACAGAG
ATGAACACAAACACGAACGTCCACGCCGCCACCAACACCTCCGCCATAAT
CAATGCAGCGCCCCCCCCCACACCAACATCATCAACACCAACACAAGCAC
CGACACCAACACCATGCTGCCGACGCCACCATCAGCAACGACACCACCAC
CACTAGCACCGCCAACACCGCCACATTACCATCAACAACACTATTACGGG
GGGGAACCATAGTAAATAGGACCTACGGTACGCACAAAAACCCTATATAC
TTACCTATTTTTACTATTACGGGGGTCCATAGTTAACAGGACCTATGGTG
TTCATAAAAACCTTTATATTTGCCTATTTTTACTAACAAAATTTGGTCCC
GTTAACTATGGACCCCCGTACTAACAAATTTTCGTCCTATTTACTATGGT
ACCCCCGTAATAGCGGCGGCACGAACACCACCAACGGCAACGGCAACGCT
AACCCCGGCACCAACATCAACACCAACGCCAACACCAGCAGCGATACCAC
CAACACGATCGATCGCGACCAACGGCCACCGAACACAACACTACCATCGC
CACCGCCGCCAACTCCAATAGCAACACCGCCGCCACCAACACCAATGCCG
AAACACCAACACCACCGCCATCAACACCAACACCAACAGTGTCACTACCA
CCACCACCACCACCACCACCAATGCCGAAACACCAACACCAACACCGCGG
ACACCACCGCCAACCACAACACTACACCACCACCACCACCACCACCACCG
CGACCAACACCAACACCGACACCGACACCGACACCACTACCGAGACGACC
AATGCTCAAGCCACCCAGACCGCCTCCAAAAATCACCACCACCGTCGCCA
CATTACCCCGTCTCTGAACTGCTGTGTTTCCTTTGTTCTCTGCACTACTA
ATAGCGCCAATGCCCGAACCACGCACACCACCACCACCACCACAACCATC
ACCACCGCCAACACTGTCCACCACCACCACCACCACCACCACCACCACCA
CCACTACTTGACCGCCTCTTCAACGCCGATGTGTATGGATGTTGTATCTT
CTCTGGCGCCCTTTGCTTGGTTTTGCTTTTTGCTTGCTTGCTGCCGCTTG
GCGGGACGTGCAGGCTGACCTTTGGAGCGTGGGTTGCATAACCTTCCACC
TCATATCGGGGGAGCCGCCTTTCGAGTGCGAGAACGAGGTGGACACGATG
CGACGCCTCCTTGCTGTCAGCTACTTCTGGCCTATGGGCTCCACGGTCTC
TAGGTGAGCGAGCCCCGATCCCCTCACTCCGCCCCTCATCCTGCCCCCCC
TCCCCCTTGTGCTGACCCCCTAGGCAGCCCACGAGCATGCTGCTGTACGA
CTCCGAAGGGCGAGTACTCGATTCATACTGTTATTGATATTAGGAATGGC
CGTTTCCGGAGCTTGCGTGCAACATCCGGAAAAAATAAAAAGCCCAGCGT
ATGTATCCGTACGTAGTTGTGTTTTGTTGTCACTTGCGGTCACCGTCCCT
CCTTGAGAGTATATTTTGAGTTCATTCTACCCACAGTCCGAAGAATACTC
ACAAAAACAAAGTCCAAATTTTTATTTGCAGTACGTACGTATAAAAAGAT
AGGATAATATTATGTGTACACATTATACTTGTATACTTATATATATATAT
ATATATACATGTATGTGTATTGTTACTTTTCGAGTCGCCGCAGTTTTTTG
GGTAACTTCATTTCAAGCGTCGATTATCACCCTCCGTCTCGAAAGGGATG
CGTGGTCAACAAAGGACTAAGGCAAGCAACAACTAAGTACGCCCCCCCCC
CCCCTCGTCTACCCCCGCCGCCGCCCGCCCCCGCCCGCCCCGTCCCTTCC
CGCCCCCCCGCCCCCCGGCACTTGGCGCCACGCGATAACTTTTTTTTTGG
GAAACACCCACCACGCACCATAATTTCGAAGCGAGGCGAAAGCGTTCGTG
TACAACCTCCTCAAGTTCGACCCGCGGCGACGATGGACCGTGCAGGAGGC
CATCGCTTCTCCGTGGCTCAAGCGCTTCGCGCCGGGCGGCACCAGCCCGC
GCAACTCCTCCAAGGTTTCCGCGTCATCGGCGGCCGTCTTGCCTTCACCG
TCGGCCTCTCTGCGTCTGGCGTTTTCGGGGGGGGGGTCGGGGACGGTGGG
GTCGGAGGCGGTGAAACTGCTGCATGTTGGCGGTTCGTCCGCGTCTGTGG
GGGGCGAATCGGCGACGTCGGGGGTGGGCGGGAAGGTGGGGGCGGGGGTT
GATGAGGTGGAATGGGTGGATGGTGAGAAGGACGCGCCGCTGCCGCTGCC
GCAGCAGCAGTCGGCGGAGGCGGAGGGGGAGCCGTTTCGAGAGGAGGCGT
CGATCAAGGTGCGGATGCTATCGAGCATGCGGGACTACCGCTCGTACGGG
GCCCTCCGGCGGACGGCCCTGATGGTCGTGGCGTACAACCACAAGCCGGA
GAGGCTGCGGGAGCTGAGGGACGAGTTCGCGGAGTTCGATACGGTGAGGC
GGGGGACGCGTGCGCTGTATTGACGGCAGGGGTATTATTATTATACGTAC
TCTCACCACCCTGAGCGTCAACATTACAGTAGTACCGCTTGGTCTTCATT
TTCATGTGCAAACGGAACGTGTATTTCCGCCTACAGCGGTAGCATTTTTT
TGGCCGAATTATTTCTGACTGACTTTATCGTCCGTCTTTGTAGGAAATTT
GTGCAACTATATAACTGCACAATTACCATCGTGTTGCAGTGCGCGTGTCG
TGCGTCTCCCTGCGTTGCAGCTCTCGAACACAGCCCCGAACTCAGCACAA
CCCGAACAATTGCTTCCGGCGGTCGATGCTGTAGTCAGTCATATATATTT
TGACACTTTTCCCCCTCTGATTTCCAAAGCGGTTGAGGTCTGGTCTGGTG
GTTTGGTCTCTGCGTTTGCGGTTGTATACATATGTACATATAGGTGTCTC
AATACTACTCAAGACTCTTAATAGTCGTACCGCAGTAATGACGAGACGTA
TGTCGTCGTGCTTTCTCCCGACGATCCCCCCCCCCTCCCCTTCTTCTCCC
AACCCCAACTTCACCTCCGACCCCAACCCCGCTCTAACCCCAACCGCACT
CCAATCCCCAACCCCAGCCTTATCTCCAACCCCGTCCCGGGACCCTCCGA
TTTTGTGCCTCGACTGTGTTTTGTTGTGTTTCGTGAAGGAGAGCAACGGT
AAGATAAGCAGGAACGAGATGCAGGCAGCACTGGCGCAGCGAGGGGTCGC
TCACGAGGAAATCGAGGAGCTCTTTAAGAGCCTCGACCTGGTGAGAAGCT
GA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig10404:2232..10133+

>mRNA_M-pyrifera_M_contig10404.858.1 ID=mRNA_M-pyrifera_M_contig10404.858.1|Name=mRNA_M-pyrifera_M_contig10404.858.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2712bp|location=Sequence derived from alignment at M-pyrifera_M_contig10404:2232..10133+ (Macrocystis pyrifera P11B4 male)
CAGCTGCAAGATGGAGAGCTCGGCACGGCCGCGATGGGTTGTGTCGTGCG
AGCAGCGCTCAAAAAACGAACGGGCGAAATCAGCTGCAAGATGGAGAGCT
CGGCACGGCCGCGATGGGTTGTGTCGTGCGAGCAGCGCTCAAAAAACGAA
CGGGCGAAATGTTCGCGTGCAAGACGTTCATGGTCAGCAGCGTCCCGAAG
AAGAAAGCACAGAAACGGATTCTGGAAACCCTTAGGAACGAGATCGACCT
CCTACGTAGCCTGGACCACCCCAACATCGTCCGCGCGTACGAGTCTTACG
AGGTCGGGCGGGACCTACACCTCGTCATGGAGCTTTGCAACGGGGGAGGT
TCGCGTGCAAGACGTTCATGGTCAGCAGCGTCCCGAAGAAGAAAGCACAG
AAACGGATTCTGGAAACCCTTAGGAACGAGATCGACCTCCTACGTAGCCT
GGACCACCCCAACATCGTCCGCGCGTACGAGTCTTACGAGGTCGGGCGGG
ACCTACACCTCGTCATGGAGCTTTGCAACGGGGGAGACCTGAACGCGAGG
TCGTACACGGAGCCTCAGGCGGCGGAGGTGGTGAAGCAGATATTGTCGGC
GATCAGGCACTCTCACGACAGGGGCATCTGCCACCGGGACCTCAAGTTCG
AGAATATTCTGTGGGAGTCCAAGGCCCCCGACGCCCAGATAAAGACCTGA
ACGCGAGGTCGTACACGGAGCCTCAGGCGGCGGAGGTGGTGAAGCAGATA
TTGTCGGCGATCAGGCACTCTCACGACAGGGGCATCTGCCACCGGGACCT
CAAGTTCGAGAATATTCTGTGGGAGTCCAAGGCCCCCGACGCCCAGATAA
AGCTGATCGACTTCGGTATGTCGGCTCGGTTCCAAGAAGGGATGCCGATG
AAGGAGCGCGTCGGGACGGTGTACACCATGGCGCCGGAGGTCCTGCAGGG
AGAGTACACCAAGCAGCTGATCGACTTCGGTATGTCGGCTCGGTTCCAAG
AAGGGATGCCGATGAAGGAGCGCGTCGGGACGGTGTACACCATGGCGCCG
GAGGTCCTGCAGGGAGAGTACACCAAGCAGGCTGACCTTTGGAGCGTGGG
TTGCATAACCTTCCACCTCATATCGGGGGAGCCGCCTTTCGAGTGCGAGA
ACGAGGTGGACACGATGCGACGCCTCCTTGCTGTCAGCTACTTCTGGCCT
ATGGGCTCCACGGTCTCTAGGCTGACCTTTGGAGCGTGGGTTGCATAACC
TTCCACCTCATATCGGGGGAGCCGCCTTTCGAGTGCGAGAACGAGGTGGA
CACGATGCGACGCCTCCTTGCTGTCAGCTACTTCTGGCCTATGGGCTCCA
CGGTCTCTAGCGAGGCGAAAGCGTTCGTGTACAACCTCCTCAAGTTCGAC
CCGCGGCGACGATGGACCGTGCAGGAGGCCATCGCTTCTCCGTGGCTCAA
GCGCTTCGCGCCGGGCGGCACCAGCCCGCGCAACTCCTCCAAGGTTTCCG
CGTCATCGGCGGCCGTCTTGCCTTCACCGTCGGCCTCTCTGCGTCTGGCG
TTTTCGGGGGGGGGGTCGGGGACGGTGGGGTCGGAGGCGGTGAAACTGCT
GCATGTTGGCGGTTCGTCCGCGTCTGTGGGGGGCGAATCGGCGACGTCGG
GGGTGGGCGGGAAGGTGGGGGCGGGGGTTGATGAGGTGGAATGGGTGGAT
GGTGAGAAGGACGCGCCGCTGCCGCTGCCGCAGCAGCAGTCGGCGGAGGC
GGAGGGGGAGCCGTTTCGAGAGGAGGCGTCGATCAAGGTGCGGATGCTAT
CGAGCATGCGGGACTACCGCTCGTACGGGGCCCTCCGGCGGACGGCCCTG
ATGGTCGTGGCGTACAACCACAAGCCGGAGAGGCTGCGGGAGCTGAGGGA
CGAGTTCGCGGAGTTCGATACGCGAGGCGAAAGCGTTCGTGTACAACCTC
CTCAAGTTCGACCCGCGGCGACGATGGACCGTGCAGGAGGCCATCGCTTC
TCCGTGGCTCAAGCGCTTCGCGCCGGGCGGCACCAGCCCGCGCAACTCCT
CCAAGGTTTCCGCGTCATCGGCGGCCGTCTTGCCTTCACCGTCGGCCTCT
CTGCGTCTGGCGTTTTCGGGGGGGGGGTCGGGGACGGTGGGGTCGGAGGC
GGTGAAACTGCTGCATGTTGGCGGTTCGTCCGCGTCTGTGGGGGGCGAAT
CGGCGACGTCGGGGGTGGGCGGGAAGGTGGGGGCGGGGGTTGATGAGGTG
GAATGGGTGGATGGTGAGAAGGACGCGCCGCTGCCGCTGCCGCAGCAGCA
GTCGGCGGAGGCGGAGGGGGAGCCGTTTCGAGAGGAGGCGTCGATCAAGG
TGCGGATGCTATCGAGCATGCGGGACTACCGCTCGTACGGGGCCCTCCGG
CGGACGGCCCTGATGGTCGTGGCGTACAACCACAAGCCGGAGAGGCTGCG
GGAGCTGAGGGACGAGTTCGCGGAGTTCGATACGGAGAGCAACGGTAAGA
TAAGCAGGAACGAGATGCAGGCAGCACTGGCGCAGCGAGGGGTCGCTCAC
GAGGAAATCGAGGAGCTCTTTAAGAGCCTCGACCTGGTGAGAAGCTGAGA
GAGCAACGGTAAGATAAGCAGGAACGAGATGCAGGCAGCACTGGCGCAGC
GAGGGGTCGCTCACGAGGAAATCGAGGAGCTCTTTAAGAGCCTCGACCTG
GTGAGAAGCTGA
back to top