prot_M-pyrifera_M_contig100404.85.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100404.85.1
Unique Nameprot_M-pyrifera_M_contig100404.85.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length198
Homology
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: L8HK23_ACACA (BRCA2 repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HK23_ACACA)

HSP 1 Score: 130 bits (327), Expect = 1.730e-31
Identity = 84/178 (47.19%), Postives = 104/178 (58.43%), Query Frame = 0
Query:   38 VEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTSTE-ATTPLE-NSTVKLLLAVNGTRRAKWHEKLG--------FHQSLCVST-------SLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLDRKRKLIEQRIARRHSAAAK 198
            +EVTDGWYSI AILD+ LT  M  G ++ G KL + GARL   + A +PLE   +  LLL VN  RRA WH KLG        FH     ++       SL SV+  GGLVP VDVVVERRYPLLFLE   +G  +TR SA E  A R FE  R  L++ K+  +E+  + + SA  K
Sbjct:  998 IEVTDGWYSINAILDEALTQHMALGKIYPGLKLRVIGARLNGNDNAMSPLEATESTTLLLQVNAVRRALWHAKLGIQRKYTRHFHSPASTNSIGPVFPVSLRSVRPEGGLVPCVDVVVERRYPLLFLEKKLDGSFITRTSAQEEHARRLFEAKRNRLVEAKKAELEKEASAQASAVTK 1175          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A433PP48_9FUNG (Tower domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PP48_9FUNG)

HSP 1 Score: 122 bits (305), Expect = 1.570e-28
Identity = 78/172 (45.35%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    3 SKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEV-EVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLT-STEATTPLENSTVKLL-LAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFE 171
            SKHMVLCV+ ++    A + GE       D +   V E+TDGWY I A +D  L  A+ KG + +G KL I GA+L+ STE T  LE S  KLL ++ NGT+   W  KLG+ +   VS SL+S+   GGL+P VDVV+ R+YPL F E +S+G  VTR + +E  A R  E
Sbjct: 1763 SKHMVLCVADILDGHKADIKGEISNGIESDSKTRSVLELTDGWYRIFATVDKVLQRAVVKGKIKIGSKLSICGAQLSGSTEPTPVLEISMSKLLTISANGTKPVSWDTKLGYQKQPIVSRSLSSLCCDGGLIPFVDVVIMRKYPLAFNEILSDGSIVTRTAREEDLAEREHE 1934          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6J1E231_MOMCH (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 n=2 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1E231_MOMCH)

HSP 1 Score: 120 bits (302), Expect = 3.690e-28
Identity = 75/181 (41.44%), Postives = 113/181 (62.43%), Query Frame = 0
Query:    2 PSKHMVLCVSAL-VSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLE-NSTVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 179
            PS  +VLCVSA+ ++  S A    +  + +  G GA++E+TDGWYSI A+LD  L+  +  G LFVGQKL I+GARL       +PLE +STV L L +NGT RA W ++LGF ++  V  S   +K++GG VP   V V R+YP+L+ + + +G  + RN   E+   + ++Q R +++D
Sbjct:  601 PSMMLVLCVSAIRLNYKSRAQACSSMMSGSDHGEGAKIELTDGWYSIDALLDGPLSKQLVTGKLFVGQKLRIWGARLCGWVGPVSPLEISSTVYLSLHINGTFRAHWADRLGFCKNGGVPLSFKCIKSSGGPVPWTLVGVSRKYPVLYKDRLGDGASIVRNEKMEMKTRQLYDQRRTAVID 781          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: UPI0019016DA2 (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2 n=2 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019016DA2)

HSP 1 Score: 120 bits (300), Expect = 6.790e-28
Identity = 77/182 (42.31%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    2 PSKHMVLCVSALVSS--GSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLENS-TVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 179
            PS  +VLC+SA+ S+    A VY        + G GA+VE+TDGWYSI A+LD  L+  +  G LFVGQKL I+GARL       +PLE S TV L L +NGT RA W ++LGF ++  V  S   +K++GG VP   V V R+YP+L+ E + +G  + R    E+   + ++Q R +++D
Sbjct:  594 PSMLLVLCISAIHSNCKSRAQVYSSMINE-LEHGEGAKVELTDGWYSIDALLDGPLSKQLLMGKLFVGQKLRIWGARLCGWIGPVSPLEMSETVYLTLHINGTYRAHWADRLGFCKNAGVPLSFKCIKSSGGPVPWTLVGVSRKYPVLYKERLGDGASIVRTERMEMKIGQLYDQRRTAIVD 774          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A1S3B533_CUCME (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2 n=8 Tax=Benincaseae TaxID=1003877 RepID=A0A1S3B533_CUCME)

HSP 1 Score: 119 bits (297), Expect = 1.710e-27
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 0
Query:    2 PSKHMVLCVSALVSS-GSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLEN-STVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 179
            PS  + LC+SA+ S   S A    +  + +  G GA+VE+TDGWYSI A+LD  L+  +  G LFVGQKL I+GARL       +PLE   TV L L +NGT RA W ++LGF ++  V  S   +K++GG VP   V V R+YP+L+ E +S+G  + R    E+   + +EQ R +++D
Sbjct:  595 PSVLLTLCISAIRSKCKSRAQVCSSMISESNYGEGAKVELTDGWYSIDALLDGPLSKQLLMGKLFVGQKLRIWGARLCGWIGPVSPLEMPETVNLTLHINGTFRAHWADRLGFCKNAGVPLSFKCIKSSGGPVPWTLVGVSRKYPVLYKERLSDGASIVRTERMEMKIRQLYEQRRTAIID 775          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6J1IXB4_CUCMA (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IXB4_CUCMA)

HSP 1 Score: 117 bits (293), Expect = 5.920e-27
Identity = 74/181 (40.88%), Postives = 108/181 (59.67%), Query Frame = 0
Query:    2 PSKHMVLCVSALVSSGSAAVYGEAKEAATKD-GRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLENS-TVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 179
            PS  +VLCVSA+ S+  +     +      D G GA+VE+TDGWYS+ A+LD  L+     G LFVGQKL I+GARL       +PLE S  V L L +NGT RA W ++LGF ++  VS S   +K++GG VP+  V V R+YP+L+ E + +G  + R    E+   + ++Q   +++D
Sbjct:  588 PSMLLVLCVSAIRSNYKSRSQACSSSTDGSDYGEGAKVELTDGWYSVDALLDGQLSKQFLSGKLFVGQKLRIWGARLCGWIGPVSPLEMSGAVYLTLHINGTFRAHWADRLGFCKNAGVSLSFKCIKSSGGPVPSTLVGVSRKYPVLYKERLGDGASIVRTEKMEMKTRQLYDQRCTAIVD 768          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6N2CEI2_SOLCI (Tower domain-containing protein n=8 Tax=Solanum TaxID=4107 RepID=A0A6N2CEI2_SOLCI)

HSP 1 Score: 115 bits (289), Expect = 2.040e-26
Identity = 79/181 (43.65%), Postives = 107/181 (59.12%), Query Frame = 0
Query:    2 PSKHMVLCVSALVSSGSAAVYGEAK-EAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLENS-TVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 179
            PS  MVLCVS + S   + V  ++   + T++G  A+VE+TDGWYSI A+LD  L+  M  G LFVGQKL I+GA L   T   +PLE S T  LLL +NGT RA W  +LGF +   +  S  S+K  GG VP   VV+ R YP+LF E +S    V R+   E+   + F + R S+++
Sbjct:  619 PSSMMVLCVSNIYSIRVSPVGPQSSLSSMTENGTCAKVELTDGWYSIIAVLDLQLSKKMAAGKLFVGQKLRIWGAGLCGWTGPVSPLEVSGTTSLLLHINGTYRAHWASRLGFCKGGGIPLSFMSIKDGGGAVPLTLVVISRIYPVLFRERLSNRGFVVRSERMEVKEMQNFNERRSSIVE 799          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A7K7B7M8_9AVES (BRCA2 protein (Fragment) n=4 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7B7M8_9AVES)

HSP 1 Score: 115 bits (287), Expect = 4.090e-26
Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    4 KHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLT-STEATTPLEN-STVKLLLAVNGTRRAKWHEKLGFHQS-LCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNS-ADELAAARTFEQSRGSL 177
            K +VLCVS ++S  +    G + ++      GA +EVTDGWY I A+LD  L   +++G L VGQK+ + GA L  S +A  PLE   ++ L ++ N +RRA+WH KLGFH+        LAS+ + GG V  VDVV++R YP+ ++E  S G  V RNS A+E  AA+  E+    L
Sbjct: 2679 KTLVLCVSKILSLSTVVSPGSSSKSVESKKEGAVIEVTDGWYGIRALLDPPLRAFVRRGRLAVGQKIVVHGAELVGSQDACAPLEAPDSLMLKISANSSRRARWHAKLGFHRDPRAFPLPLASLYSEGGAVGCVDVVIQRTYPVQWMEKTSCGSYVFRNSQAEEREAAKHAEEQEKKL 2856          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6P8R2Y6_GEOSA (breast cancer type 2 susceptibility protein isoform X1 n=7 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8R2Y6_GEOSA)

HSP 1 Score: 114 bits (286), Expect = 5.620e-26
Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 0
Query:    1 MPSKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTSTE-ATTPLEN-STVKLLLAVNGTRRAKWHEKLGFHQS-LCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADE 163
            + +K +VLCVS +VSS +   +  + +   +  +   +EVTDGWY I A+LD  L++ + +G LFVGQK+ + GA L  +E A +PLE   ++ L ++ N TR A WH KLGFH+        L+S+ + GG+V  VDV+++R YP+ ++E +S G+ V RN   E
Sbjct: 2870 LAAKTLVLCVSKIVSSDAKLSHASSNKINPEPNKDITIEVTDGWYGINALLDPPLSVLLHRGRLFVGQKIIVHGAELIGSETACSPLEAPESLMLKISANSTRPACWHAKLGFHRDPRPFLLPLSSLFSEGGIVGCVDVIIQRVYPMQWMEKMSNGLYVFRNDRAE 3035          
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A2P6NUN6_9EUKA (BRCA2 repeat family protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUN6_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 7.150e-26
Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 0
Query:    3 SKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTSTE-ATTPLE--NSTVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADE 163
            SKHMVLCV+ + S GS+ +                +EVTDGWYS+ A LD+ L   ++KG ++ G KL +FGA++   E    PLE  NS V L    NG RRA W+ KLG  +S+    +L S+ A+GG++P V VVV+R+YP LF E + +   + R+  +E
Sbjct:  794 SKHMVLCVATVKSDGSSNI----------------IEVTDGWYSLNAALDEPLNEQLKKGKIYPGLKLRVFGAQIDGLENGLPPLEAKNSAV-LKFFFNGVRRAPWYAKLGLQRSMTFPVNLRSISASGGMIPCVQVVVQRKYPRLFREVLGDNTVIIRDVKEE 940          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8HK23_ACACA1.730e-3147.19BRCA2 repeat-containing protein n=1 Tax=Acanthamoe... [more]
A0A433PP48_9FUNG1.570e-2845.35Tower domain-containing protein n=1 Tax=Endogone s... [more]
A0A6J1E231_MOMCH3.690e-2841.44protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-l... [more]
UPI0019016DA26.790e-2842.31protein BREAST CANCER SUSCEPTIBILITY 2 homolog B i... [more]
A0A1S3B533_CUCME1.710e-2741.99protein BREAST CANCER SUSCEPTIBILITY 2 homolog B i... [more]
A0A6J1IXB4_CUCMA5.920e-2740.88protein BREAST CANCER SUSCEPTIBILITY 2 homolog B n... [more]
A0A6N2CEI2_SOLCI2.040e-2643.65Tower domain-containing protein n=8 Tax=Solanum Ta... [more]
A0A7K7B7M8_9AVES4.090e-2641.57BRCA2 protein (Fragment) n=4 Tax=Nothoprocta TaxID... [more]
A0A6P8R2Y6_GEOSA5.620e-2639.76breast cancer type 2 susceptibility protein isofor... [more]
A0A2P6NUN6_9EUKA7.150e-2640.85BRCA2 repeat family protein n=1 Tax=Planoprotostel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015187BRCA2, OB1PFAMPF09103BRCA-2_OB1coord: 2..113
e-value: 1.2E-29
score: 102.8
NoneNo IPR availableGENE3D2.40.50.140coord: 1..115
e-value: 3.0E-32
score: 113.1
NoneNo IPR availableGENE3D2.40.50.140coord: 116..196
e-value: 1.5E-15
score: 59.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..198
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.63
IPR015525Breast cancer type 2 susceptibility proteinPANTHERPTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2coord: 2..186
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100404contigM-pyrifera_M_contig100404:3..596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100404.85.1mRNA_M-pyrifera_M_contig100404.85.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100404 3..596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100404.85.1 ID=prot_M-pyrifera_M_contig100404.85.1|Name=mRNA_M-pyrifera_M_contig100404.85.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
MPSKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAI
LDDDLTIAMQKGLLFVGQKLHIFGARLTSTEATTPLENSTVKLLLAVNGT
RRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETV
SEGIRVTRNSADELAAARTFEQSRGSLLDRKRKLIEQRIARRHSAAAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015187BRCA2_OB_1
IPR015525BRCA2
IPR012340NA-bd_OB-fold