mRNA_M-pyrifera_M_contig100404.85.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100404.85.1
Unique NamemRNA_M-pyrifera_M_contig100404.85.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: L8HK23_ACACA (BRCA2 repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HK23_ACACA)

HSP 1 Score: 130 bits (327), Expect = 1.730e-31
Identity = 84/178 (47.19%), Postives = 104/178 (58.43%), Query Frame = 1 
Query:  112 VEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTSTE-ATTPLE-NSTVKLLLAVNGTRRAKWHEKLG--------FHQSLCVST-------SLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLDRKRKLIEQRIARRHSAAAK 594
            +EVTDGWYSI AILD+ LT  M  G ++ G KL + GARL   + A +PLE   +  LLL VN  RRA WH KLG        FH     ++       SL SV+  GGLVP VDVVVERRYPLLFLE   +G  +TR SA E  A R FE  R  L++ K+  +E+  + + SA  K
Sbjct:  998 IEVTDGWYSINAILDEALTQHMALGKIYPGLKLRVIGARLNGNDNAMSPLEATESTTLLLQVNAVRRALWHAKLGIQRKYTRHFHSPASTNSIGPVFPVSLRSVRPEGGLVPCVDVVVERRYPLLFLEKKLDGSFITRTSAQEEHARRLFEAKRNRLVEAKKAELEKEASAQASAVTK 1175
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A433PP48_9FUNG (Tower domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PP48_9FUNG)

HSP 1 Score: 122 bits (305), Expect = 1.570e-28
Identity = 78/172 (45.35%), Postives = 104/172 (60.47%), Query Frame = 1 
Query:    7 SKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEV-EVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLT-STEATTPLENSTVKLL-LAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFE 513
            SKHMVLCV+ ++    A + GE       D +   V E+TDGWY I A +D  L  A+ KG + +G KL I GA+L+ STE T  LE S  KLL ++ NGT+   W  KLG+ +   VS SL+S+   GGL+P VDVV+ R+YPL F E +S+G  VTR + +E  A R  E
Sbjct: 1763 SKHMVLCVADILDGHKADIKGEISNGIESDSKTRSVLELTDGWYRIFATVDKVLQRAVVKGKIKIGSKLSICGAQLSGSTEPTPVLEISMSKLLTISANGTKPVSWDTKLGYQKQPIVSRSLSSLCCDGGLIPFVDVVIMRKYPLAFNEILSDGSIVTRTAREEDLAEREHE 1934
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6J1E231_MOMCH (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 n=2 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1E231_MOMCH)

HSP 1 Score: 120 bits (302), Expect = 3.690e-28
Identity = 75/181 (41.44%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:    4 PSKHMVLCVSAL-VSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLE-NSTVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 537
            PS  +VLCVSA+ ++  S A    +  + +  G GA++E+TDGWYSI A+LD  L+  +  G LFVGQKL I+GARL       +PLE +STV L L +NGT RA W ++LGF ++  V  S   +K++GG VP   V V R+YP+L+ + + +G  + RN   E+   + ++Q R +++D
Sbjct:  601 PSMMLVLCVSAIRLNYKSRAQACSSMMSGSDHGEGAKIELTDGWYSIDALLDGPLSKQLVTGKLFVGQKLRIWGARLCGWVGPVSPLEISSTVYLSLHINGTFRAHWADRLGFCKNGGVPLSFKCIKSSGGPVPWTLVGVSRKYPVLYKDRLGDGASIVRNEKMEMKTRQLYDQRRTAVID 781
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: UPI0019016DA2 (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2 n=2 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019016DA2)

HSP 1 Score: 120 bits (300), Expect = 6.790e-28
Identity = 77/182 (42.31%), Postives = 110/182 (60.44%), Query Frame = 1 
Query:    4 PSKHMVLCVSALVSS--GSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLENS-TVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 537
            PS  +VLC+SA+ S+    A VY        + G GA+VE+TDGWYSI A+LD  L+  +  G LFVGQKL I+GARL       +PLE S TV L L +NGT RA W ++LGF ++  V  S   +K++GG VP   V V R+YP+L+ E + +G  + R    E+   + ++Q R +++D
Sbjct:  594 PSMLLVLCISAIHSNCKSRAQVYSSMINE-LEHGEGAKVELTDGWYSIDALLDGPLSKQLLMGKLFVGQKLRIWGARLCGWIGPVSPLEMSETVYLTLHINGTYRAHWADRLGFCKNAGVPLSFKCIKSSGGPVPWTLVGVSRKYPVLYKERLGDGASIVRTERMEMKIGQLYDQRRTAIVD 774
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A1S3B533_CUCME (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2 n=8 Tax=Benincaseae TaxID=1003877 RepID=A0A1S3B533_CUCME)

HSP 1 Score: 119 bits (297), Expect = 1.710e-27
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 1 
Query:    4 PSKHMVLCVSALVSS-GSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLEN-STVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 537
            PS  + LC+SA+ S   S A    +  + +  G GA+VE+TDGWYSI A+LD  L+  +  G LFVGQKL I+GARL       +PLE   TV L L +NGT RA W ++LGF ++  V  S   +K++GG VP   V V R+YP+L+ E +S+G  + R    E+   + +EQ R +++D
Sbjct:  595 PSVLLTLCISAIRSKCKSRAQVCSSMISESNYGEGAKVELTDGWYSIDALLDGPLSKQLLMGKLFVGQKLRIWGARLCGWIGPVSPLEMPETVNLTLHINGTFRAHWADRLGFCKNAGVPLSFKCIKSSGGPVPWTLVGVSRKYPVLYKERLSDGASIVRTERMEMKIRQLYEQRRTAIID 775
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6J1IXB4_CUCMA (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IXB4_CUCMA)

HSP 1 Score: 117 bits (293), Expect = 5.920e-27
Identity = 74/181 (40.88%), Postives = 108/181 (59.67%), Query Frame = 1 
Query:    4 PSKHMVLCVSALVSSGSAAVYGEAKEAATKD-GRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLENS-TVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 537
            PS  +VLCVSA+ S+  +     +      D G GA+VE+TDGWYS+ A+LD  L+     G LFVGQKL I+GARL       +PLE S  V L L +NGT RA W ++LGF ++  VS S   +K++GG VP+  V V R+YP+L+ E + +G  + R    E+   + ++Q   +++D
Sbjct:  588 PSMLLVLCVSAIRSNYKSRSQACSSSTDGSDYGEGAKVELTDGWYSVDALLDGQLSKQFLSGKLFVGQKLRIWGARLCGWIGPVSPLEMSGAVYLTLHINGTFRAHWADRLGFCKNAGVSLSFKCIKSSGGPVPSTLVGVSRKYPVLYKERLGDGASIVRTEKMEMKTRQLYDQRCTAIVD 768
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6N2CEI2_SOLCI (Tower domain-containing protein n=8 Tax=Solanum TaxID=4107 RepID=A0A6N2CEI2_SOLCI)

HSP 1 Score: 115 bits (289), Expect = 2.040e-26
Identity = 79/181 (43.65%), Postives = 107/181 (59.12%), Query Frame = 1 
Query:    4 PSKHMVLCVSALVSSGSAAVYGEAK-EAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTS-TEATTPLENS-TVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADELAAARTFEQSRGSLLD 537
            PS  MVLCVS + S   + V  ++   + T++G  A+VE+TDGWYSI A+LD  L+  M  G LFVGQKL I+GA L   T   +PLE S T  LLL +NGT RA W  +LGF +   +  S  S+K  GG VP   VV+ R YP+LF E +S    V R+   E+   + F + R S+++
Sbjct:  619 PSSMMVLCVSNIYSIRVSPVGPQSSLSSMTENGTCAKVELTDGWYSIIAVLDLQLSKKMAAGKLFVGQKLRIWGAGLCGWTGPVSPLEVSGTTSLLLHINGTYRAHWASRLGFCKGGGIPLSFMSIKDGGGAVPLTLVVISRIYPVLFRERLSNRGFVVRSERMEVKEMQNFNERRSSIVE 799
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A7K7B7M8_9AVES (BRCA2 protein (Fragment) n=4 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7B7M8_9AVES)

HSP 1 Score: 115 bits (287), Expect = 4.090e-26
Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 1 
Query:   10 KHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLT-STEATTPLEN-STVKLLLAVNGTRRAKWHEKLGFHQS-LCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNS-ADELAAARTFEQSRGSL 531
            K +VLCVS ++S  +    G + ++      GA +EVTDGWY I A+LD  L   +++G L VGQK+ + GA L  S +A  PLE   ++ L ++ N +RRA+WH KLGFH+        LAS+ + GG V  VDVV++R YP+ ++E  S G  V RNS A+E  AA+  E+    L
Sbjct: 2679 KTLVLCVSKILSLSTVVSPGSSSKSVESKKEGAVIEVTDGWYGIRALLDPPLRAFVRRGRLAVGQKIVVHGAELVGSQDACAPLEAPDSLMLKISANSSRRARWHAKLGFHRDPRAFPLPLASLYSEGGAVGCVDVVIQRTYPVQWMEKTSCGSYVFRNSQAEEREAAKHAEEQEKKL 2856
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A6P8R2Y6_GEOSA (breast cancer type 2 susceptibility protein isoform X1 n=7 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8R2Y6_GEOSA)

HSP 1 Score: 114 bits (286), Expect = 5.620e-26
Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 1 
Query:    1 MPSKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTSTE-ATTPLEN-STVKLLLAVNGTRRAKWHEKLGFHQS-LCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADE 489
            + +K +VLCVS +VSS +   +  + +   +  +   +EVTDGWY I A+LD  L++ + +G LFVGQK+ + GA L  +E A +PLE   ++ L ++ N TR A WH KLGFH+        L+S+ + GG+V  VDV+++R YP+ ++E +S G+ V RN   E
Sbjct: 2870 LAAKTLVLCVSKIVSSDAKLSHASSNKINPEPNKDITIEVTDGWYGINALLDPPLSVLLHRGRLFVGQKIIVHGAELIGSETACSPLEAPESLMLKISANSTRPACWHAKLGFHRDPRPFLLPLSSLFSEGGIVGCVDVIIQRVYPMQWMEKMSNGLYVFRNDRAE 3035
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BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Match: A0A2P6NUN6_9EUKA (BRCA2 repeat family protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUN6_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 7.150e-26
Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 1 
Query:    7 SKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAILDDDLTIAMQKGLLFVGQKLHIFGARLTSTE-ATTPLE--NSTVKLLLAVNGTRRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETVSEGIRVTRNSADE 489
            SKHMVLCV+ + S GS+ +                +EVTDGWYS+ A LD+ L   ++KG ++ G KL +FGA++   E    PLE  NS V L    NG RRA W+ KLG  +S+    +L S+ A+GG++P V VVV+R+YP LF E + +   + R+  +E
Sbjct:  794 SKHMVLCVATVKSDGSSNI----------------IEVTDGWYSLNAALDEPLNEQLKKGKIYPGLKLRVFGAQIDGLENGLPPLEAKNSAV-LKFFFNGVRRAPWYAKLGLQRSMTFPVNLRSISASGGMIPCVQVVVQRKYPRLFREVLGDNTVIIRDVKEE 940
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100404.85.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8HK23_ACACA1.730e-3147.19BRCA2 repeat-containing protein n=1 Tax=Acanthamoe... [more]
A0A433PP48_9FUNG1.570e-2845.35Tower domain-containing protein n=1 Tax=Endogone s... [more]
A0A6J1E231_MOMCH3.690e-2841.44protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-l... [more]
UPI0019016DA26.790e-2842.31protein BREAST CANCER SUSCEPTIBILITY 2 homolog B i... [more]
A0A1S3B533_CUCME1.710e-2741.99protein BREAST CANCER SUSCEPTIBILITY 2 homolog B i... [more]
A0A6J1IXB4_CUCMA5.920e-2740.88protein BREAST CANCER SUSCEPTIBILITY 2 homolog B n... [more]
A0A6N2CEI2_SOLCI2.040e-2643.65Tower domain-containing protein n=8 Tax=Solanum Ta... [more]
A0A7K7B7M8_9AVES4.090e-2641.57BRCA2 protein (Fragment) n=4 Tax=Nothoprocta TaxID... [more]
A0A6P8R2Y6_GEOSA5.620e-2639.76breast cancer type 2 susceptibility protein isofor... [more]
A0A2P6NUN6_9EUKA7.150e-2640.85BRCA2 repeat family protein n=1 Tax=Planoprotostel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100404contigM-pyrifera_M_contig100404:3..596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score123.2
Seed ortholog evalue1.3e-25
Seed eggNOG ortholog3656.XP_008442370.1
KEGG koko:K06236,ko:K08775
KEGG Pathwayko03440,ko03460,ko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,ko05200,ko05212,ko05224,map03440,map03460,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165,map05200,map05212,map05224
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000784,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0000910,GO:0001556,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0002020,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004402,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006312,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006978,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007059,GO:0007098,GO:0007127,GO:0007140,GO:0007141,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007548,GO:0007568,GO:0007569,GO:0008022,GO:0008080,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0008283,GO:0008285,GO:0008406,GO:0008585,GO:0008608,GO:0008630,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009994,GO:0010165,GO:0010212,GO:0010225,GO:0010332,GO:0010468,GO:0010484,GO:0010485,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019953,GO:0021700,GO:0022402,GO:0022412,GO:0022414,GO:0023052,GO:0030097,GO:0030141,GO:0030154,GO:0030330,GO:0030879,GO:0031023,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031410,GO:0031619,GO:0031974,GO:0031981,GO:0031982,GO:0032200,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033260,GO:0033365,GO:0033554,GO:0033593,GO:0033599,GO:0033600,GO:0034212,GO:0034502,GO:0034613,GO:0034641,GO:0034645,GO:0035264,GO:0035556,GO:0036211,GO:0040007,GO:0042127,GO:0042592,GO:0042770,GO:0042771,GO:0042772,GO:0042802,GO:0043009,GO:0043015,GO:0043060,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043966,GO:0043967,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044786,GO:0045005,GO:0045132,GO:0045137,GO:0045143,GO:0045184,GO:0045787,GO:0045893,GO:0045931,GO:0045934,GO:0045935,GO:0046483,GO:0046545,GO:0046660,GO:0048232,GO:0048285,GO:0048468,GO:0048469,GO:0048477,GO:0048478,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048589,GO:0048599,GO:0048608,GO:0048609,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050000,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051093,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051252,GO:0051254,GO:0051276,GO:0051298,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051311,GO:0051316,GO:0051321,GO:0051455,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060322,GO:0061458,GO:0061640,GO:0061733,GO:0061982,GO:0065007,GO:0065008,GO:0070013,GO:0070198,GO:0070199,GO:0070200,GO:0070727,GO:0071695,GO:0071704,GO:0071840,GO:0072331,GO:0072332,GO:0072594,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097190,GO:0097193,GO:0097708,GO:0098687,GO:0098813,GO:0099086,GO:0099503,GO:0140013,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1902298,GO:1902680,GO:1902969,GO:1903046,GO:1903047,GO:1903506,GO:1903508,GO:1990426,GO:1990505,GO:2000026,GO:2000104,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.BRCA2, oligonucleotide/oligosaccharide-binding, domain 1
EggNOG OGs37R53@33090,3G7EW@35493,4JKNH@91835,KOG4751@1,KOG4751@2759
COG Functional cat.L
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko03036,ko03400,ko04121,ko04516
Exons1
Model size594
Cds size594
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.1078892-CDS-M-pyrifera_M_contig100404:2..5961622815500.1078892-CDS-M-pyrifera_M_contig100404:2..596Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100404 3..596 +
1692277439.4373093-CDS-M-pyrifera_M_contig100404:2..5961692277439.4373093-CDS-M-pyrifera_M_contig100404:2..596Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100404 3..596 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100404.85.1prot_M-pyrifera_M_contig100404.85.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100404 3..596 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100404.85.1

>prot_M-pyrifera_M_contig100404.85.1 ID=prot_M-pyrifera_M_contig100404.85.1|Name=mRNA_M-pyrifera_M_contig100404.85.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
MPSKHMVLCVSALVSSGSAAVYGEAKEAATKDGRGAEVEVTDGWYSIGAI
LDDDLTIAMQKGLLFVGQKLHIFGARLTSTEATTPLENSTVKLLLAVNGT
RRAKWHEKLGFHQSLCVSTSLASVKATGGLVPAVDVVVERRYPLLFLETV
SEGIRVTRNSADELAAARTFEQSRGSLLDRKRKLIEQRIARRHSAAAK
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mRNA from alignment at M-pyrifera_M_contig100404:3..596+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100404.85.1 ID=mRNA_M-pyrifera_M_contig100404.85.1|Name=mRNA_M-pyrifera_M_contig100404.85.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig100404:3..596+ (Macrocystis pyrifera P11B4 male)
ATGCCAAGTAAGCACATGGTGCTCTGTGTATCGGCACTGGTCAGCAGTGG
CAGCGCCGCAGTCTACGGTGAGGCGAAAGAAGCCGCTACTAAGGACGGCA
GAGGCGCAGAGGTGGAAGTGACTGATGGGTGGTATTCGATTGGAGCCATC
TTGGATGACGACCTCACCATTGCCATGCAGAAGGGCCTCCTCTTCGTGGG
CCAGAAACTTCACATCTTCGGCGCTAGACTCACCTCTACTGAGGCGACTA
CTCCGCTGGAGAACTCCACTGTGAAGCTGCTGCTTGCAGTCAACGGCACC
CGCCGTGCCAAGTGGCACGAGAAGCTGGGCTTCCACCAGAGTCTCTGTGT
ATCCACAAGTCTGGCCTCTGTGAAGGCAACGGGGGGCCTGGTTCCTGCTG
TGGATGTGGTGGTGGAGCGGCGATACCCACTCCTCTTCCTGGAGACAGTG
AGTGAGGGGATTCGAGTCACAAGAAACTCAGCAGACGAGCTGGCAGCGGC
TCGAACCTTTGAGCAGTCTCGAGGGAGCCTGCTGGACCGCAAGAGGAAGC
TGATCGAGCAGAGGATAGCTCGGCGACACTCTGCGGCAGCAAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100404:3..596+

>mRNA_M-pyrifera_M_contig100404.85.1 ID=mRNA_M-pyrifera_M_contig100404.85.1|Name=mRNA_M-pyrifera_M_contig100404.85.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig100404:3..596+ (Macrocystis pyrifera P11B4 male)
ATGCCAAGTAAGCACATGGTGCTCTGTGTATCGGCACTGGTCAGCAGTGG
CAGCGCCGCAGTCTACGGTGAGGCGAAAGAAGCCGCTACTAAGGACGGCA
GAGGCGCAGAGGTGGAAGTGACTGATGGGTGGTATTCGATTGGAGCCATC
TTGGATGACGACCTCACCATTGCCATGCAGAAGGGCCTCCTCTTCGTGGG
CCAGAAACTTCACATCTTCGGCGCTAGACTCACCTCTACTGAGGCGACTA
CTCCGCTGGAGAACTCCACTGTGAAGCTGCTGCTTGCAGTCAACGGCACC
CGCCGTGCCAAGTGGCACGAGAAGCTGGGCTTCCACCAGAGTCTCTGTGT
ATCCACAAGTCTGGCCTCTGTGAAGGCAACGGGGGGCCTGGTTCCTGCTG
TGGATGTGGTGGTGGAGCGGCGATACCCACTCCTCTTCCTGGAGACAGTG
AGTGAGGGGATTCGAGTCACAAGAAACTCAGCAGACGAGCTGGCAGCGGC
TCGAACCTTTGAGCAGTCTCGAGGGAGCCTGCTGGACCGCAAGAGGAAGC
TGATCGAGCAGAGGATAGCTCGGCGACACTCTGCGGCAGCAAAGATGCCA
AGTAAGCACATGGTGCTCTGTGTATCGGCACTGGTCAGCAGTGGCAGCGC
CGCAGTCTACGGTGAGGCGAAAGAAGCCGCTACTAAGGACGGCAGAGGCG
CAGAGGTGGAAGTGACTGATGGGTGGTATTCGATTGGAGCCATCTTGGAT
GACGACCTCACCATTGCCATGCAGAAGGGCCTCCTCTTCGTGGGCCAGAA
ACTTCACATCTTCGGCGCTAGACTCACCTCTACTGAGGCGACTACTCCGC
TGGAGAACTCCACTGTGAAGCTGCTGCTTGCAGTCAACGGCACCCGCCGT
GCCAAGTGGCACGAGAAGCTGGGCTTCCACCAGAGTCTCTGTGTATCCAC
AAGTCTGGCCTCTGTGAAGGCAACGGGGGGCCTGGTTCCTGCTGTGGATG
TGGTGGTGGAGCGGCGATACCCACTCCTCTTCCTGGAGACAGTGAGTGAG
GGGATTCGAGTCACAAGAAACTCAGCAGACGAGCTGGCAGCGGCTCGAAC
CTTTGAGCAGTCTCGAGGGAGCCTGCTGGACCGCAAGAGGAAGCTGATCG
AGCAGAGGATAGCTCGGCGACACTCTGCGGCAGCAAAG
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