mRNA_M-pyrifera_M_contig103992.849.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A6B1AZT8_9ACTN (Acyl--CoA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AZT8_9ACTN) HSP 1 Score: 305 bits (780), Expect = 3.910e-98 Identity = 154/215 (71.63%), Postives = 172/215 (80.00%), Query Frame = 1 Query: 1 DRLISHAQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARVPGELGVECVDMDAEQARLQRDVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVGGTL 645 DR I+H QFVDLVAAEAAAL+ DH I +GDRV ILAANSPDWV+AYFALVS GA+V LYNGWWTPDEI HATELT PKLILGDEKRLARVP + VDMD+E+ RLQRDVG H +PTV++ EDD SIFFTSGTTGR+KGA SHRGLVGFVE+QMLNGA++ M AA EAAG+ +MTSPLFHVSGLSG+TLINM GGTL Sbjct: 60 DRRITHDQFVDLVAAEAAALSADHGISKGDRVGILAANSPDWVVAYFALVSSGAIVALYNGWWTPDEIVHATELTTPKLILGDEKRLARVPDSVSAPLVDMDSERPRLQRDVGAHEMPTVELVEDDPVSIFFTSGTTGRAKGATASHRGLVGFVEIQMLNGAVRFMQAAAEAEAAGQXXXXXXXXXXXXMMTSPLFHVSGLSGSTLINMVAGGTL 274
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A6I2Y5N1_9ACTN (AMP-binding protein n=3 Tax=root TaxID=1 RepID=A0A6I2Y5N1_9ACTN) HSP 1 Score: 191 bits (486), Expect = 2.530e-54 Identity = 101/215 (46.98%), Postives = 140/215 (65.12%), Query Frame = 1 Query: 1 DRLISHAQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARVPG-ELGVECVDMDAEQARLQRDVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRP--SGAPRVLMTSPLFHVSGLSGATLINMTVG 636 D ++ A V VA+ A AL H I +GDRV ILAAN ++ +A++A+ S+ A+VC +NGWWT DEIR+A ELT PK+++GD KRL RV G +LG ++++ + +LP V I+EDD I FTSGTTGR+KGA++SHRGL+GFV+V M N ++ M + EA GE PP P SG L+TSP+FHVSGL ++ + +G Sbjct: 70 DATLTRADLVPQVASVATALRDLHGIEKGDRVGILAANCIEFAVAFWAVTSLDAIVCAFNGWWTTDEIRYAAELTEPKVLIGDAKRLERVAGIDLGCTVIEIERDWPSFAAYAPGAALPDVPIEEDDPALILFTSGTTGRAKGALISHRGLIGFVQVLMCNAMVRGRMAVLQAEALGEEPPTPPAASGQTVTLLTSPMFHVSGLLAGIIMGLPMG 284
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A538DSL1_9ACTN (Acyl--CoA ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DSL1_9ACTN) HSP 1 Score: 183 bits (464), Expect = 7.050e-53 Identity = 99/200 (49.50%), Postives = 132/200 (66.00%), Query Frame = 1 Query: 40 AAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARVPG-ELGVECVDMDAEQARLQRDVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVG 636 A+ AAAL +D+ +GDRVAI +AN PD+ + ++A VS GA+V YNGWWT DE+RHATELT+PK+++GD +RL RV +LG V+ + L +LP+ IDEDD I FTSGTTGR+KGAVVSHRGLVGFV+V N A+K +AA+ + G P P+ L+TSP+FHVSGL ++ + G Sbjct: 63 ASVAAALRERYDVQKGDRVAIFSANRPDYAVLFWAAVSAGAIVTAYNGWWTVDEVRHATELTSPKVVVGDARRLERVTHLDLGAAIVEFGEQFDALAHSAPAAALPSTMIDEDDPAVILFTSGTTGRAKGAVVSHRGLVGFVQVNFCNAAVKT--RAAQLQ--GVAPASAPAAPAVTLLTSPMFHVSGLFAGVILGLASG 258
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A2D6BRM4_9DELT (Fatty acid--CoA ligase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BRM4_9DELT) HSP 1 Score: 186 bits (471), Expect = 2.640e-52 Identity = 107/217 (49.31%), Postives = 135/217 (62.21%), Query Frame = 1 Query: 1 DRLISHAQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARVPG-ELGVECVDMDAEQARLQRDVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGE-PPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVGGTL 645 DR I+ LVA+ A L + IG GDRVAILAAN P+WVIA++A VS+G +V NGWWTPDEI + L+ PKL++GD +RL R G ELGV V++++ A L+ LP I EDD I FTSGTTGR KGAV SHRG+VGF Q+ GA++A+ A+G P P P G L T+PLFH+SGL T++NM GG L Sbjct: 60 DRRIAFEAHRQLVASVARGLQEQYGIGPGDRVAILAANCPEWVIAFWATVSLGGIVSALNGWWTPDEIEYGVGLSEPKLLIGDRRRLERAEGLELGVPIVEVESGFAALEGFAPDAELPEQPIAEDDPAVILFTSGTTGRPKGAVASHRGIVGFASQQIAGGAVRAV-------ASGNIPGPDAPQGC--ALATAPLFHLSGLYAVTVMNMATGGKL 267
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A7K2CQL9_9ACTN (Acyl--CoA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2CQL9_9ACTN) HSP 1 Score: 182 bits (462), Expect = 5.510e-51 Identity = 102/210 (48.57%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 25 FVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARV-PGELGVECVDMDAEQARLQRDVGRHSLPTVDID--EDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVGGTL 645 F+ VAA A+AL + IGRGDRVAI AAN P+WV+++FA S+GAVV YNGWWT DE+ +ATEL+ P L++ D RL R G G C+ ++ + A SL +D+ EDD I FTSGTTGR KGAV +HRGL+GFV+ M+NGA++ + N A + P L TSPLFHVSGL G TLI M GG + Sbjct: 68 FIAQVAAAASAL-QERGIGRGDRVAIFAANCPEWVVSFFAATSIGAVVSAYNGWWTTDEVDYATELSEPALVIADRPRLERSGSGGAGTPCLVIEDDWADFLATGAGASLDDIDVALAEDDPAVILFTSGTTGRPKGAVATHRGLIGFVQSTMMNGAVRVFTEMRTNPPADDGSAPSPPDQAVTLGTSPLFHVSGLYGTTLIAMVTGGKI 276
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A7Y2DCX8_9ACTN (Acyl--CoA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DCX8_9ACTN) HSP 1 Score: 179 bits (454), Expect = 9.600e-50 Identity = 108/217 (49.77%), Postives = 135/217 (62.21%), Query Frame = 1 Query: 1 DRLISHAQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARVPGELGVECVDMDAEQARLQR--DVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVGGTL 645 D +S+AQF VA A AL + I GDRVAI AAN P WV A+FA+ +GA+ NGWWTPDE+R+A ELT PKL+LGD KRLAR+ G + V VD++AE+ +L+ V + V I EDD + FTSGTTGR KGAV+SHRGLVGFV+ Q N ++ QA R PP + VL TSPLFH+SGL L+NM G + Sbjct: 64 DERLSYAQFAADVAEMAGALRDRYGIEPGDRVAIFAANIPAWVTAFFAITRLGAMAAACNGWWTPDEVRYAIELTEPKLLLGDAKRLARLEG-VDVPTVDLEAERDQLRGADPVEDAAAAGVTIGEDDPAVLMFTSGTTGRPKGAVISHRGLVGFVQCQQAN-VVEKTKQAERLLGIDIPPS---TNQKIVLGTSPLFHMSGLHATILLNMVEGAKI 275
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A7C8DF99_9DELT (Long-chain fatty acid--CoA ligase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8DF99_9DELT) HSP 1 Score: 179 bits (453), Expect = 1.520e-49 Identity = 100/213 (46.95%), Postives = 137/213 (64.32%), Query Frame = 1 Query: 1 DRLISHAQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARVPG-ELGVECVDMDAEQARLQRDVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVG 636 DR I +A+ V LVA+ A +LA D+ I +GDRVAILAAN P+W+I ++A S+GA+V NGWWT DEI+ T+ KL++GD KRL RV G +LGV + ++ + L R LP+++IDEDDA I FTSGTTGR KGAVVSHR LVGFV+ ++G + ++ +A P AP L+T+PLFH+SGL ++ + G Sbjct: 75 DRRIRYAEHVHLVASVARSLADDYGIQKGDRVAILAANCPEWLITFWAATSLGAIVSALNGWWTSDEIKFGVAHTSCKLLVGDAKRLERVAGIDLGVPVLQIENDFEALLRH-REAKLPSIEIDEDDAALILFTSGTTGRPKGAVVSHRALVGFVQTNTMHGLERVLLAGKLGDAPAADATAPP--APAALITAPLFHLSGLYTGGIMMLATG 284
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A534Q0G3_9DELT (Acyl--CoA ligase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Q0G3_9DELT) HSP 1 Score: 171 bits (434), Expect = 9.100e-49 Identity = 98/210 (46.67%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 10 ISHAQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARV-PGELGVECVDMDAEQARLQRDVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVG 636 IS+AQ +A A L + + GDRVAILAAN P+WVIA++A V+ G +V NGWWT DEIR+ PK+++GD RLAR+ G G V+M+ E A+L+ LP VDI EDD I +TSGTTGR KGAV +HRG+ GFV V M NG +K M+ AA + G P R +P +L+T PLFH+SGL +++ + G Sbjct: 67 ISYAQHFARASAFAHVLRERYGVQPGDRVAILAANRPEWVIAFWATVASGGIVAALNGWWTEDEIRYGIGDCDPKVVIGDRARLARLRAGGAGAPIVEMELEFAQLEASAAGKPLPDVDIAEDDPAVILYTSGTTGRPKGAVNTHRGICGFVSVGMFNG-VKMMIYAAES---GRAPAGRAPASPAMLVTVPLFHLSGLYSGSVMMLAAG 272
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A6B1GXF7_9ACTN (Acyl--CoA ligase n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1GXF7_9ACTN) HSP 1 Score: 172 bits (437), Expect = 2.360e-47 Identity = 96/210 (45.71%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 25 FVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARV-PGELGVECVDMDAEQARLQRDVGRHSLPTVDID--EDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVGGTL 645 F+ VAA A AL I GDRVAI AAN P+WV+++FA S+GA+V YNGWWT DE+ +AT L+ P L++ D RL R G+ C+ ++ + A +L +D+ EDD+ I FTSGTTGR KGAV +HRGL+GFV+ M+NGA++ + N A + P L TSPLFHVSGL G TLI+M GG + Sbjct: 68 FIAQVAAAATAL-QQRGISHGDRVAIFAANCPEWVVSFFAATSIGAIVSAYNGWWTTDEVDYATALSDPALVIADRPRLERSGSGDTDAPCLVIEDDWADFIAAGAGTALDDIDVPLAEDDSAVILFTSGTTGRPKGAVATHRGLLGFVQSTMMNGAVRVFTEMRTNPPADDGSAPSPPAQSVTLGTSPLFHVSGLYGTTLISMVTGGKI 276
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Match: A0A358A2Y9_9ACTN (Fatty acid--CoA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A2Y9_9ACTN) HSP 1 Score: 167 bits (422), Expect = 5.750e-47 Identity = 92/206 (44.66%), Postives = 124/206 (60.19%), Query Frame = 1 Query: 19 AQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVSMGAVVCLYNGWWTPDEIRHATELTAPKLILGDEKRLARVPGELGVECVDMDAEQARLQRDVGRHSLPTVDIDEDDACSIFFTSGTTGRSKGAVVSHRGLVGFVEVQMLNGALKAMMQAARNEAAGEPPPQRPSGAPRVLMTSPLFHVSGLSGATLINMTVG 636 A+ + A+ AA LA +DIG GDRVAILAAN+P+W+ +++A+ S+GA+ NGWWT DEIRH +LT PKL+L D KR R+ G+ GV V + + A L+ LP IDEDDA +I FTSGTTGR KGA+++HR ++ + GA A R A + PP+ P + L SPLFH+SGL + M G Sbjct: 78 AENIATAASLAAGLAERYDIGHGDRVAILAANTPEWIQSFWAITSLGAIAVAMNGWWTEDEIRHGLKLTTPKLLLADAKRAERITGDPGVPLVVFEEDFAELRDHAPGAKLPDTPIDEDDAATILFTSGTTGRPKGAIITHRNFNAYLTCAFILGARDAF----RFPADPDDPPKPPMLS---LAASPLFHISGLHSCCVTAMASG 276 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103992.849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103992.849.1 >prot_M-pyrifera_M_contig103992.849.1 ID=prot_M-pyrifera_M_contig103992.849.1|Name=mRNA_M-pyrifera_M_contig103992.849.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp DRLISHAQFVDLVAAEAAALATDHDIGRGDRVAILAANSPDWVIAYFALVback to top mRNA from alignment at M-pyrifera_M_contig103992:3..647- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103992.849.1 ID=mRNA_M-pyrifera_M_contig103992.849.1|Name=mRNA_M-pyrifera_M_contig103992.849.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=645bp|location=Sequence derived from alignment at M-pyrifera_M_contig103992:3..647- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103992:3..647- >mRNA_M-pyrifera_M_contig103992.849.1 ID=mRNA_M-pyrifera_M_contig103992.849.1|Name=mRNA_M-pyrifera_M_contig103992.849.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig103992:3..647- (Macrocystis pyrifera P11B4 male)back to top |