mRNA_M-pyrifera_M_contig103970.843.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103970.843.1
Unique NamemRNA_M-pyrifera_M_contig103970.843.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: A0A812RKF2_9DINO (LACTBL1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RKF2_9DINO)

HSP 1 Score: 99.0 bits (245), Expect = 1.030e-22
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVM---HLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTLAAELMRA 276
            SNLGFAL GNL+AE V+   H +F+  +Q  +  PLGL HTG  Y P   A LA  Y ANG+P PFYDLGW  PAG  YS+  DLV+LA+ LM+A
Sbjct:  214 SNLGFALAGNLVAERVVGGGH-TFTSLVQAWVVEPLGLSHTGNVYGPGTPAGLAVPYQANGDPSPFYDLGWVGPAGSMYSSPSDLVSLASALMQA 307          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: A0A5A8D5D4_CAFRO (Beta-lactamase domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5D4_CAFRO)

HSP 1 Score: 99.0 bits (245), Expect = 3.070e-22
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVM---HLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTLAAELMRA 276
            SNLGFAL GNL+AE V+   H +F+  +Q  +  PLGL HTG  Y P   A LA  Y ANG+P PFYDLGW  PAG  YS+  DLV+LA+ LM+A
Sbjct:  217 SNLGFALAGNLVAERVVGGGH-TFTSLVQAWVVEPLGLSHTGNVYGPGTPAGLAVPYQANGDPSPFYDLGWVGPAGSMYSSPSDLVSLASALMQA 310          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: A0A812W9G7_9DINO (LACTBL1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W9G7_9DINO)

HSP 1 Score: 96.3 bits (238), Expect = 2.980e-21
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVMHLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDAN--GNPVPFYDLGWSSPAGQAYSTVEDLVTLAAELMRA 276
            SNLGFAL+G+LLAE V+ L FS A+ + I  PLGL +TG  Y PDIL  LATGY A     P  F DLGW++PAG AYS   ++  L   +M A
Sbjct:  206 SNLGFALMGHLLAERVLGLDFSAAVDKFIISPLGLNNTGFTYTPDILNRLATGYTATVPRQPAAFVDLGWTAPAGSAYSNAREMNALLQAIMSA 299          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: A7SXQ9_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SXQ9_NEMVE)

HSP 1 Score: 83.2 bits (204), Expect = 2.320e-17
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVMHLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTLAAEL 267
            SNLG+ALLG LL E +++++F   +++ +  PLG+ +TG      +L N+A  Y  NG   PF  LGW+ PAG  YSTV+DL+ L A L
Sbjct:   97 SNLGYALLGRLLTENLLNITFEAWVEEEVLKPLGMANTGFKITDKVLKNIAFPYYPNGTLFPFMTLGWADPAGGMYSTVQDLMKLNAML 185          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: L8GL17_ACACA (Betalactamase n=2 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GL17_ACACA)

HSP 1 Score: 83.6 bits (205), Expect = 5.980e-17
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVMHLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGY-DANGNPVPFYDLGWSSPAGQAYSTVEDLVTLAAELMR 273
            SN GFALLG LL EE++  SF   ++++I   L + +TG  + P++ + +A GY D    P P YDLGW +PAGQ YSTVEDL  L + + R
Sbjct:   44 SNFGFALLGRLL-EELVGDSFESYVEKNILQSLNMTNTGFTFTPEVKSKMAVGYFDGTDQPAPLYDLGWEAPAGQMYSTVEDLCHLMSLIFR 134          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: UPI000A2A7157 (putative beta-lactamase-like 1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7157)

HSP 1 Score: 84.0 bits (206), Expect = 6.600e-17
Identity = 38/86 (44.19%), Postives = 58/86 (67.44%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVMHLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTLA 258
            SNLG+ALLG LL + +++ +F   ++++I  PLG+K+TG++    +  ++A  Y  NG  +PF DLGW+ PAG  YST  DL+ LA
Sbjct:  238 SNLGYALLGRLLTQNLLNTTFEAWVKENILVPLGMKNTGIEITKAVKKDMALPYFPNGTVMPFMDLGWAGPAGDMYSTTTDLMKLA 323          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: A0A6P8HVZ4_ACTTE (putative beta-lactamase-like 1 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HVZ4_ACTTE)

HSP 1 Score: 83.6 bits (205), Expect = 9.020e-17
Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVMHLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTLA 258
            SNLG+A LG LL E +++ +F   +++    PLG+K TG +    +L N+A  Y  +G  +PF ++GW++PAGQ YST  DL+ LA
Sbjct:  235 SNLGYAXLGRLLTENLLNTTFEEWVEKQXLQPLGMKDTGFEISKKVLENMALPYSPDGKVLPFMNVGWAAPAGQMYSTTNDLMKLA 320          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: UPI000A2A8DCC (putative beta-lactamase-like 1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8DCC)

HSP 1 Score: 82.8 bits (203), Expect = 1.670e-16
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVM-HLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTLAAELM 270
            SNLG+ALLG L  E V+ + +F    + +I  PLGL HTG  +  D+  N+A  YD  G  +P  ++GW SP+GQ YST+E+L  +   LM
Sbjct:  247 SNLGYALLGRLFTERVIKNTTFEEWTKDNILSPLGLNHTGFSFTSDVKKNMAFPYDKQGQLLPILNIGWLSPSGQMYSTIEELARVGMFLM 337          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: A0A6P8HYU9_ACTTE (putative beta-lactamase-like 1 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HYU9_ACTTE)

HSP 1 Score: 79.0 bits (193), Expect = 3.770e-15
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVMHLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDL 246
            SNLG+ALLG +L E+ M+++F       +  PLGLK+TG   + D+  NLA   D  G  +PF ++GW SPAGQ YST+ D+
Sbjct:  245 SNLGYALLGRILTEK-MNITFERWTMDTLLTPLGLKNTGFHINKDLQKNLAFSXDKAGKVMPFMNIGWLSPAGQMYSTINDM 325          
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Match: A0A3M6TCJ9_POCDA (Beta-lactamase domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TCJ9_POCDA)

HSP 1 Score: 75.1 bits (183), Expect = 8.530e-14
Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    1 SNLGFALLGNLLAEEVM-HLSFSHALQQHITGPLGLKHTGVDYDPDILANLATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTL 255
            SNLG+ALLG LL+E ++ + +F   ++++I  PL +  TG +   D+  N+A  Y  NG  +PF ++ W +PAGQ YST+ED+  L
Sbjct:  249 SNLGYALLGRLLSENLLQNQTFETWVKENILKPLNMTRTGFEITADVQQNMAFPYSPNGEIMPFMNIYWVAPAGQMYSTLEDMTKL 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103970.843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812RKF2_9DINO1.030e-2255.79LACTBL1 protein (Fragment) n=1 Tax=Symbiodinium sp... [more]
A0A5A8D5D4_CAFRO3.070e-2255.79Beta-lactamase domain-containing protein n=6 Tax=C... [more]
A0A812W9G7_9DINO2.980e-2153.19LACTBL1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
A7SXQ9_NEMVE2.320e-1744.94Predicted protein (Fragment) n=2 Tax=Nematostella ... [more]
L8GL17_ACACA5.980e-1746.74Betalactamase n=2 Tax=Acanthamoeba castellanii str... [more]
UPI000A2A71576.600e-1744.19putative beta-lactamase-like 1 n=1 Tax=Exaiptasia ... [more]
A0A6P8HVZ4_ACTTE9.020e-1743.02putative beta-lactamase-like 1 n=1 Tax=Actinia ten... [more]
UPI000A2A8DCC1.670e-1643.96putative beta-lactamase-like 1 n=1 Tax=Exaiptasia ... [more]
A0A6P8HYU9_ACTTE3.770e-1546.34putative beta-lactamase-like 1 n=1 Tax=Actinia ten... [more]
A0A3M6TCJ9_POCDA8.530e-1441.86Beta-lactamase domain-containing protein n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103970contigM-pyrifera_M_contig103970:2..277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score81.6
Seed ortholog evalue2e-13
Seed eggNOG ortholog45351.EDO31511
Preferred nameLACTBL1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Beta-lactamase
EggNOG OGs2S3SB@2759,39ZJG@33154,3BYYI@33208,COG1680@1
COG Functional cat.V
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size276
Cds size276
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815545.493792-CDS-M-pyrifera_M_contig103970:1..2771622815545.493792-CDS-M-pyrifera_M_contig103970:1..277Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103970 2..277 +
1692277457.3827474-CDS-M-pyrifera_M_contig103970:1..2771692277457.3827474-CDS-M-pyrifera_M_contig103970:1..277Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103970 2..277 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103970.843.1prot_M-pyrifera_M_contig103970.843.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103970 2..277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103970.843.1

>prot_M-pyrifera_M_contig103970.843.1 ID=prot_M-pyrifera_M_contig103970.843.1|Name=mRNA_M-pyrifera_M_contig103970.843.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp
SNLGFALLGNLLAEEVMHLSFSHALQQHITGPLGLKHTGVDYDPDILANL
ATGYDANGNPVPFYDLGWSSPAGQAYSTVEDLVTLAAELMRA
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mRNA from alignment at M-pyrifera_M_contig103970:2..277+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103970.843.1 ID=mRNA_M-pyrifera_M_contig103970.843.1|Name=mRNA_M-pyrifera_M_contig103970.843.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig103970:2..277+ (Macrocystis pyrifera P11B4 male)
TCCAACCTAGGCTTTGCGTTGCTCGGCAACTTGCTCGCAGAAGAAGTGAT GCACCTCTCCTTCTCCCACGCGCTCCAGCAACACATCACAGGGCCGCTGG GGCTCAAACACACCGGAGTCGATTATGACCCCGACATTCTCGCAAACCTC GCCACAGGGTACGACGCCAACGGAAACCCAGTGCCGTTCTACGACCTCGG CTGGTCCTCCCCTGCAGGACAGGCGTACTCCACCGTCGAAGACCTCGTTA CTCTTGCTGCAGAACTCATGAGAGCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103970:2..277+

>mRNA_M-pyrifera_M_contig103970.843.1 ID=mRNA_M-pyrifera_M_contig103970.843.1|Name=mRNA_M-pyrifera_M_contig103970.843.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig103970:2..277+ (Macrocystis pyrifera P11B4 male)
TCCAACCTAGGCTTTGCGTTGCTCGGCAACTTGCTCGCAGAAGAAGTGAT
GCACCTCTCCTTCTCCCACGCGCTCCAGCAACACATCACAGGGCCGCTGG
GGCTCAAACACACCGGAGTCGATTATGACCCCGACATTCTCGCAAACCTC
GCCACAGGGTACGACGCCAACGGAAACCCAGTGCCGTTCTACGACCTCGG
CTGGTCCTCCCCTGCAGGACAGGCGTACTCCACCGTCGAAGACCTCGTTA
CTCTTGCTGCAGAACTCATGAGAGCTTCCAACCTAGGCTTTGCGTTGCTC
GGCAACTTGCTCGCAGAAGAAGTGATGCACCTCTCCTTCTCCCACGCGCT
CCAGCAACACATCACAGGGCCGCTGGGGCTCAAACACACCGGAGTCGATT
ATGACCCCGACATTCTCGCAAACCTCGCCACAGGGTACGACGCCAACGGA
AACCCAGTGCCGTTCTACGACCTCGGCTGGTCCTCCCCTGCAGGACAGGC
GTACTCCACCGTCGAAGACCTCGTTACTCTTGCTGCAGAACTCATGAGAG
CT
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